FFCP PHASE1:Hg19::chr6:10412392..10412409,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7020 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |||
|TSSclassifier=strong | |||
|UniProt=F8WDC8 | |||
|association_with_transcript=0bp_to_ENST00000489805_5end | |||
|description=CAGE_peak_4_at_TFAP2A_5end | |||
|id=chr6:10412392..10412409,- | |||
|ontology_enrichment_celltype=CL:0000066!8.94e-33!254;CL:0000076!3.49e-09!62;CL:0002076!4.43e-09!43;CL:0000077!7.71e-09!19;CL:0002077!3.61e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.55e-08;19!CL:0002076;2.05e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.67e-34,253;CL:0002076,4.39e-09,42;CL:0000076,5.61e-09,63;CL:0000077,2.43e-08,19;CL:0002077,4.35e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.32e-08;29 | |||
|ontology_enrichment_disease=DOID:0050687!4.07e-31!143;DOID:14566!4.97e-26!239;DOID:162!8.78e-26!235;DOID:305!3.82e-23!106 | |||
|ontology_enrichment_disease_v019=DOID:305;1.26e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.36e-32,143;DOID:14566,6.12e-26,239;DOID:162,7.57e-26,235;DOID:305,4.79e-24,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.83e-11!169;UBERON:0000925!8.83e-11!169;UBERON:0006595!8.83e-11!169;UBERON:0001004!2.26e-10!72;UBERON:0000065!3.13e-08!53;UBERON:0000077!4.08e-08!130;UBERON:0001007!7.97e-08!155;UBERON:0001555!7.97e-08!155;UBERON:0007026!7.97e-08!155;UBERON:0008947!9.10e-08!38;UBERON:0003258!9.10e-08!38;UBERON:0003102!2.61e-07!95;UBERON:0000072!3.25e-07!46 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,6.10e-10,74;UBERON:0004119,6.29e-08,160;UBERON:0000925,6.29e-08,160;UBERON:0006595,6.29e-08,160;UBERON:0008947,9.97e-08,38;UBERON:0003258,9.97e-08,38;UBERON:0000065,1.20e-07,54;UBERON:0003102,2.18e-07,99;UBERON:0000072,5.40e-07,47;UBERON:0005631,9.85e-07,14;UBERON:0000158,9.85e-07,14 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,12.66959958355,8.44054330331051,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0.0764134057479513,0,0.0787107813136792,0,0,0,4.59710612239464,3.0120591877825,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,2.1686349143074,2.00535164254356,0.144846518960824,0,0.486634870302636,0,0,0,1.37528029272598,5.10013403609559,0.741568885568859,0,0,0,0,0,0,1.19257444420023,0.860234595106124,1.73570250803797,1.69592382577203,2.09749718104953,1.92582629358047,0.835979866147242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0.496971951695318,1.2663051166458,6.62045904066094,5.44989579422746,2.4826786753885,0,1.06748995729705,1.48000529050296,0,0.538842688278752,0,0,0,2.10889288650417,0,0,0,0,0,0,0.61246251376468,1.47401180774122,0.309977343527296,0,0,0,0,3.53505839303539,2.12701483782339,1.93944880838928,0,0,0,0.340296549480063,4.48474089222155,1.92201649936711,1.48352330811693,1.50045548042201,1.54578793857658,2.57640540045629,1.8611685633159,4.38818463827292,2.43592512902997,2.01947019395292,1.93304787148829,11.4768700341356,1.77504796258307,1.30977727695932,5.4259389539356,3.28543450377605,4.36393792945335,2.29443676311203,0.243947412259191,0.132529768321485,0.813357600086629,1.86589899027667,1.26160425437814,0,3.12899064659632,7.07565032012174,2.76269842704961,0,0,9.22793040310782,9.4407426443737,9.15841913557232,8.38234192766194,7.62578054323422,10.2026366217772,5.39325232640658,5.29797955838434,8.0796902958742,0,0,0,0,0,0,0,0,0.122988438543114,0.857839051492628,2.96325770603289,1.1240175325762,1.3068766413512,4.16648003213383,5.2129328849652,0,0,1.15930404975077,0.70445216541493,0.288732895522148,0,0,3.95102198979638,7.72637545885385,0,0,0,0,4.03157107677263,1.70130116690864,4.38836761243957,1.74380363108377,2.68367875415648,0,0,0.207328115540772,0.144119953416961,0.12624243342638,25.9706387654971,32.4690161724536,35.1652341630141,13.6857956818164,4.8328921570562,10.2116639666932,23.723593908338,1.00917975910825,0,0.95339771567235,3.36106460970222,0,0,6.91439103120663,5.2003718455683,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.899756920638513,0,0,0,1.91699884393266,1.14861935834114,0,0,0,0,3.92298003977345,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,12.89419341491,13.20374517099,15.7702415033935,11.1284344243078,0,0,0,0,0.184369168541703,5.64743494042539,0.195801157462741,0,0,0,0,4.24378600024763,8.32177197552485,12.7003923198466,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,3.80962293576241,1.38121483403844,0.918515585316854,0,0.655622074797121,2.70719767744447,2.0794141018192,0.784349769176855,4.38417673959782,2.53323909342902,0,0,0,0,0,0,2.54876273045038,0,4.25362033972139,0,0,0.256450125116389,0,0,12.4679624093744,2.83865340936865,1.65018999841176,2.29706215198469,3.25030123018261,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,5.12383237619032,4.22818148203234,4.59405764980503,3.33820676823315,0.929691098594572,0.62962469366128,0,0.924100740528266,0,1.73986598415015,2.7798632865588,2.43312307461385,0.744316738719335,0,0.190630193923825,0,0,3.18203247925937,3.13979456079692,0,0,0,0.606547444719948,3.17020642346017,0,0,0,0,0.682499557039929,0.141405431953713,0,4.41092274836899,2.65375590096488,5.69986150829892,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,3.41525856389144,1.04980416073495,2.88666338176536,0.670302275535787,3.26672954583968,11.3913998939903,6.02707521739722,1.68471475667626,3.99087138183008,2.29723400206959,0,0,0,0,0,0,0,0,3.73884248946156,0.962479855263359,7.35120647943095,0,0,0,0.318852545457645,0,0,0,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0,5.45999455352578,0.80719882876419,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0,19.7381807122989,0.935702702041099,0,0.485442086998054,0,0.568272293612826,1.19372242368845,2.96964680832639,0.614321404198464,0,0,20.8147278392834,0.659215496907038,0,0.796991953004279,0.276283915531148,37.5379794302871,8.07922591767023,0.369254416383208,2.48831670129446,2.60618218327248,0.716084698702437,0,0.591860433821602,0,2.22273980289274,0,0,0,22.1363596922448,15.2180399993381,0.724999575434793,1.365521379426,5.33932665614809,15.8379746784517,15.5134517958659,6.12369688104834,15.1053745591964,0,0,3.05163472634166,2.32216445855572,2.65992857058193,0,18.3016618711903,4.74040730547251,0.692552326534174,0.569710279235006,0,0,0,3.50901275705111,2.93112298885959,14.3919389525031,0,0,1.49590513710141,0,0,0,0,0,8.86191871017714,4.08082020397869,0,0,0,0.353830258013357,1.22206028986725,2.96521128680622,3.33622635155558,3.55034628318548,0,0,0,0.547364367646998,4.69595085437015,8.49731328369325,2.36750641709634,2.41981432097328,0.61214552326098,0.695052375913368,1.80388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| |||
|short_description=p4@TFAP2A | |||
}} |
Revision as of 09:55, 22 January 2014
Short description: | p4@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TFAP2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000489805_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | F8WDC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.67e-34 | 253 |
endo-epithelial cell | 4.39e-09 | 42 |
squamous epithelial cell | 5.61e-09 | 63 |
mesothelial cell | 2.43e-08 | 19 |
ecto-epithelial cell | 4.35e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 6.10e-10 | 74 |
endoderm-derived structure | 6.29e-08 | 160 |
endoderm | 6.29e-08 | 160 |
presumptive endoderm | 6.29e-08 | 160 |
respiratory primordium | 9.97e-08 | 38 |
endoderm of foregut | 9.97e-08 | 38 |
respiratory tract | 1.20e-07 | 54 |
surface structure | 2.18e-07 | 99 |
segment of respiratory tract | 5.40e-07 | 47 |
extraembryonic membrane | 9.85e-07 | 14 |
membranous layer | 9.85e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.36e-32 | 143 |
disease of cellular proliferation | 6.12e-26 | 239 |
cancer | 7.57e-26 | 235 |
carcinoma | 4.79e-24 | 106 |