FFCP PHASE1:Hg19::chr5:170739239..170739274,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:170739239..170739274,+ | |||
|id=chr5:170739239..170739274,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.48e-10;3!CL:0002379;7.01e-09;1!CL:1001319;1.84e-08;1!CL:1000600;1.84e-08;1!CL:0002563;8.87e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.48e-10,3;CL:0002379,7.01e-09,1;CL:1001319,1.98e-08,1;CL:1000600,1.98e-08,1;CL:0002563,8.57e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.16e-10;3 | |||
|ontology_enrichment_disease=DOID:162!4.42e-12!235;DOID:14566!1.29e-11!239;DOID:0050687!6.68e-11!143;DOID:305!3.99e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:3620;7.01e-09;1!DOID:3565;7.01e-09;1!DOID:3119;2.43e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.42e-13,235;DOID:14566,5.63e-13,239;DOID:305,6.20e-09,106;DOID:3620,7.01e-09,1;DOID:3565,7.01e-09,1;DOID:3119,2.53e-08,14;DOID:0050687,3.95e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.84e-08;1!UBERON:0001256;1.84e-08;1!UBERON:0001259;1.84e-08;1!UBERON:0003350;2.31e-08;8!UBERON:0001242;8.87e-08;4!UBERON:0001262;8.87e-08;4!UBERON:0004786;8.87e-08;4!UBERON:0004808;8.87e-08;4!UBERON:0001277;8.87e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.98e-08,1;UBERON:0001256,1.98e-08,1;UBERON:0001259,1.98e-08,1;UBERON:0003350,2.31e-08,8;UBERON:0001242,8.57e-08,4;UBERON:0001262,8.57e-08,4;UBERON:0004786,8.57e-08,4;UBERON:0004808,8.57e-08,4;UBERON:0001277,8.57e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8448265781467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65890789101569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4939787103167,0,0.59873811429845,0,0,11.3617679096094,0,0,0,0,0,0,0,17.8855419829937,0,0,0,0,0,0,6.15436994738562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07412704805365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5774520895125,1.54810963903714,0.591095237907095,0,0,0,0,0,0,6.55230804191337,0.108647371922008,0,0,0,13.2851287654457,0,0,0,0,0,0,0,0,0,1.27217764290547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941798755221676,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3419801986186,0,0,3.19695375331408,10.3745100350956,0,0,0,12.1767484854124,0,0,0,0,0,0,0,0,0,5.78352179414492,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,5.51193896482593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0.303298235083296,0.285465333544967,12.4690884440031,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29101410674747,11.2227545545041,0,0,0,0,12.6608593335999,0,0,0,0,0,0,6.07719912354764,0,0.194860308839388,0,0.327130788511688,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00929529502746,0.556157009460346,0,0,0.560544326627578,0,0,2.8665101273223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.16222790580926,0.594600453887843,0,0,0,0,0,0,0,0.942706188406504,0.196308467114945,0,0,0,0,0,0,0.178553938605658,0,0.722172300202514,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286888821570705,0,5.37261572832432,0,0,7.63514217905989,0,0,0,0,0,0 | |||
|short_description=p@chr5:170739239..170739274,+ | |||
}} |
Revision as of 09:00, 22 January 2014
Short description: | p@chr5:170739239..170739274, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:170739239..170739274, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.48e-10 | 3 |
meningothelial cell | 7.01e-09 | 1 |
bladder cell | 1.98e-08 | 1 |
lower urinary tract cell | 1.98e-08 | 1 |
intestinal epithelial cell | 8.57e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.98e-08 | 1 |
wall of urinary bladder | 1.98e-08 | 1 |
mucosa of urinary bladder | 1.98e-08 | 1 |
epithelium of mucosa | 2.31e-08 | 8 |
intestinal mucosa | 8.57e-08 | 4 |
wall of intestine | 8.57e-08 | 4 |
gastrointestinal system mucosa | 8.57e-08 | 4 |
gastrointestinal system epithelium | 8.57e-08 | 4 |
intestinal epithelium | 8.57e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.42e-13 | 235 |
disease of cellular proliferation | 5.63e-13 | 239 |
carcinoma | 6.20e-09 | 106 |
central nervous system cancer | 7.01e-09 | 1 |
meningioma | 7.01e-09 | 1 |
gastrointestinal system cancer | 2.53e-08 | 14 |
cell type cancer | 3.95e-07 | 143 |