FFCP PHASE1:Hg19::chr5:168504845..168504850,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr5:168504845..168504850,- | |||
|id=chr5:168504845..168504850,- | |||
|ontology_enrichment_celltype=CL:1000306!1.66e-07!4;CL:0002547!1.66e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002591;4.22e-21;1!CL:0002573;6.34e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,7.72e-21,1;CL:0002573,6.34e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.34e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;3.02e-11;2!DOID:962;3.02e-11;2!DOID:1192;6.34e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,3.02e-11,2;DOID:962,3.02e-11,2;DOID:1192,6.34e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.95e-15!115;UBERON:0003075!7.25e-10!86;UBERON:0007284!7.25e-10!86;UBERON:0002791!1.19e-09!33;UBERON:0002616!1.27e-09!59;UBERON:0002020!1.89e-09!34;UBERON:0003528!1.89e-09!34;UBERON:0001893!2.98e-09!34;UBERON:0002346!4.39e-09!90;UBERON:0001049!4.48e-09!57;UBERON:0005068!4.48e-09!57;UBERON:0006241!4.48e-09!57;UBERON:0007135!4.48e-09!57;UBERON:0000955!7.29e-09!69;UBERON:0006238!7.29e-09!69;UBERON:0000073!7.79e-09!94;UBERON:0001016!7.79e-09!94;UBERON:0002780!3.86e-08!41;UBERON:0001890!3.86e-08!41;UBERON:0006240!3.86e-08!41;UBERON:0000153!4.35e-08!129;UBERON:0007811!4.35e-08!129;UBERON:0001017!6.61e-08!82;UBERON:0005743!6.80e-08!86;UBERON:0003080!7.55e-08!42;UBERON:0001869!9.78e-08!32;UBERON:0000415!1.66e-07!4;UBERON:0007240!1.66e-07!4;UBERON:0005742!1.66e-07!4;UBERON:0005734!1.66e-07!4;UBERON:0004664!1.66e-07!4;UBERON:0004663!1.66e-07!4;UBERON:0000033!1.66e-07!123;UBERON:0004121!4.60e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;4.22e-21;1!UBERON:0002426;4.22e-21;1!UBERON:0003831;4.22e-21;1!UBERON:0003898;4.22e-21;1!UBERON:0004830;4.22e-21;1!UBERON:0003830;4.22e-21;1!UBERON:0005175;4.22e-21;1!UBERON:0001774;4.22e-21;1!UBERON:0001103;4.22e-21;1!UBERON:0000341;3.02e-11;2!UBERON:0001954;3.02e-11;2!UBERON:0005090;3.02e-11;2!UBERON:0001630;3.02e-11;2!UBERON:0000078;3.02e-11;2!UBERON:0003022;3.02e-11;2!UBERON:0002012;3.02e-11;2!UBERON:0002421;3.02e-11;2!UBERON:0002600;3.02e-11;2!UBERON:0008886;3.02e-11;2!UBERON:0002114;6.34e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.88e-21,1;UBERON:0002426,2.82e-21,1;UBERON:0003831,2.82e-21,1;UBERON:0003898,2.82e-21,1;UBERON:0004830,2.82e-21,1;UBERON:0003830,2.82e-21,1;UBERON:0005175,2.82e-21,1;UBERON:0001774,2.82e-21,1;UBERON:0001103,2.82e-21,1;UBERON:0010084,2.82e-21,1;UBERON:0000341,2.23e-11,2;UBERON:0005090,2.47e-11,2;UBERON:0001630,2.47e-11,2;UBERON:0001954,2.73e-11,2;UBERON:0003022,2.73e-11,2;UBERON:0002421,2.73e-11,2;UBERON:0002600,2.73e-11,2;UBERON:0000078,4.09e-11,2;UBERON:0007497,4.09e-11,2;UBERON:0003643,4.09e-11,2;UBERON:0003504,4.09e-11,2;UBERON:0003469,4.09e-11,2;UBERON:0003496,4.09e-11,2;UBERON:0002012,4.09e-11,2;UBERON:0008886,4.09e-11,2;UBERON:0007303,4.09e-11,2;UBERON:0002061,4.09e-11,2;UBERON:0005432,4.09e-11,2;UBERON:0004363,4.09e-11,2;UBERON:0009722,4.34e-08,11;UBERON:0007690,4.34e-08,11;UBERON:0004145,7.76e-08,3;UBERON:0002114,8.29e-08,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.264818361626438,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0.184099797284599,0.323292113637624,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,5.91151142758382,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0.361789315876224,0,0.442317039724898,1.47773809476774,0,0.10893846351899,0.557694977114413,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0.544017803369474,0,0,0,0.471162288750703,0,0.122026264901963,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0.214441591374926,0,0,0,0,0,0.617602894321944,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.436838552768056,0,0,0,0,1.59002175326709,0,0,0.352675943690684,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0.397832444232549,0.150420656698515,0.20170506870352,0,0,0.163771917510097,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.203909198930495,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0.980593287015622,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,1.90451545170992,0,0.186224142887574,0,0.12729431655633,1.21270313374932,0,0,0.0673520530145875,0,0.332660356546013,0.0814032686109745,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p@chr5:168504845..168504850,- | |||
}} |
Revision as of 08:55, 22 January 2014
Short description: | p@chr5:168504845..168504850, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr5:168504845..168504850, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 7.72e-21 | 1 |
Schwann cell | 6.34e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
surface | 1.88e-21 | 1 |
chest muscle | 2.82e-21 | 1 |
respiratory system muscle | 2.82e-21 | 1 |
skeletal muscle of trunk | 2.82e-21 | 1 |
respiratory system skeletal muscle | 2.82e-21 | 1 |
thoracic segment muscle | 2.82e-21 | 1 |
chest organ | 2.82e-21 | 1 |
muscle of trunk | 2.82e-21 | 1 |
diaphragm | 2.82e-21 | 1 |
future diaphragm | 2.82e-21 | 1 |
throat | 2.23e-11 | 2 |
muscle structure | 2.47e-11 | 2 |
muscle organ | 2.47e-11 | 2 |
Ammon's horn | 2.73e-11 | 2 |
lobe parts of cerebral cortex | 2.73e-11 | 2 |
hippocampal formation | 2.73e-11 | 2 |
limbic lobe | 2.73e-11 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.09e-11 | 2 |
developing epithelial placode | 4.09e-11 | 2 |
respiratory system arterial blood vessel | 4.09e-11 | 2 |
respiratory system blood vessel | 4.09e-11 | 2 |
respiratory system artery | 4.09e-11 | 2 |
head blood vessel | 4.09e-11 | 2 |
pulmonary artery | 4.09e-11 | 2 |
pulmonary vascular system | 4.09e-11 | 2 |
pharyngeal vasculature | 4.09e-11 | 2 |
truncus arteriosus | 4.09e-11 | 2 |
aortic sac | 4.09e-11 | 2 |
pharyngeal arch artery | 4.09e-11 | 2 |
entire pharyngeal arch endoderm | 4.34e-08 | 11 |
early pharyngeal endoderm | 4.34e-08 | 11 |
outflow tract | 7.76e-08 | 3 |
duodenum | 8.29e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 3.02e-11 | 2 |
neurofibroma | 3.02e-11 | 2 |
peripheral nervous system neoplasm | 6.34e-08 | 3 |