FFCP PHASE1:Hg19::chr5:134787984..134788005,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=497189 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34024 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZNK6 | |||
|association_with_transcript=83bp_to_ENST00000537858,NM_001099221,uc003law.3_5end | |||
|coexpression_cluster_id=C4466 | |||
|description=CAGE_peak_4_at_TIFAB_5end | |||
|id=chr5:134787984..134788005,- | |||
|ontology_enrichment_celltype=CL:0000763!1.66e-30!112;CL:0000049!1.66e-30!112;CL:0002009!2.27e-28!65;CL:0000557!4.81e-27!71;CL:0002194!1.33e-25!63;CL:0000576!1.33e-25!63;CL:0000040!1.33e-25!63;CL:0000559!1.33e-25!63;CL:0000451!9.99e-24!10;CL:0000037!3.62e-23!172;CL:0000566!3.62e-23!172;CL:0000766!1.18e-22!76;CL:0000839!4.31e-22!70;CL:0000988!5.26e-22!182;CL:0000990!1.60e-19!8;CL:0002032!5.35e-19!165;CL:0000837!5.35e-19!165;CL:0000738!5.75e-19!140;CL:0000840!1.50e-13!5;CL:0001029!1.50e-13!5;CL:0002087!1.71e-13!119;CL:0002031!1.07e-12!124;CL:0000453!2.16e-11!5;CL:0002057!2.38e-10!42;CL:0000860!2.34e-09!45;CL:0000784!5.78e-08!3;CL:0002619!1.84e-07!3;CL:0000235!5.31e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000451;8.40e-57;10!CL:0000990;2.66e-44;8!CL:0000840;1.22e-26;5!CL:0000784;1.15e-20;3!CL:0000453;1.49e-20;5!CL:0002619;6.19e-19;3!CL:0000235;3.27e-10;6!CL:0002032;5.40e-08;1!CL:0000557;5.40e-08;1!CL:0000037;9.43e-08;1!CL:0001024;9.43e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000451,8.68e-57,10;CL:0000990,2.75e-44,8;CL:0000840,1.19e-26,5;CL:0001029,1.19e-26,5;CL:0000784,1.19e-20,3;CL:0000453,1.83e-20,5;CL:0002619,3.76e-19,3;CL:0000763,4.25e-19,108;CL:0000049,4.25e-19,108;CL:0000557,2.57e-15,67;CL:0000037,2.68e-15,168;CL:0002009,1.60e-14,61;CL:0000988,2.73e-14,177;CL:0002194,9.09e-13,59;CL:0000576,9.09e-13,59;CL:0000040,9.09e-13,59;CL:0000559,9.09e-13,59;CL:0002032,1.64e-11,161;CL:0000837,1.64e-11,161;CL:0000738,3.09e-11,136;CL:0000839,3.38e-11,66;CL:0000235,3.60e-10,6;CL:0000766,4.30e-10,72;CL:0001024,9.44e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.31e-07;1!CL:0000049;8.89e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.67e-31!102;UBERON:0003061!5.67e-31!102;UBERON:0002193!3.56e-30!112;UBERON:0002371!1.57e-24!80;UBERON:0002405!3.59e-22!115;UBERON:0001474!4.52e-22!86;UBERON:0004765!3.15e-17!101;UBERON:0001434!3.15e-17!101;UBERON:0003081!2.14e-10!216;UBERON:0007023!8.20e-08!115;UBERON:0002204!2.93e-07!167;UBERON:0004177!3.36e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.75e-13;2!UBERON:0005058;4.75e-13;2!UBERON:0009113;4.75e-13;2!UBERON:0004177;1.37e-11;5!UBERON:0005057;1.37e-11;5!UBERON:0002405;2.02e-10;27!UBERON:0002372;2.31e-07;1!UBERON:0000029;2.31e-07;1!UBERON:0001154;2.31e-07;1!UBERON:0001153;2.31e-07;1!UBERON:0009854;2.31e-07;1!UBERON:0001961;2.31e-07;1!UBERON:0001744;2.31e-07;1!UBERON:0001042;2.31e-07;1!UBERON:0001735;2.31e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.93e-22,93;UBERON:0002193,8.60e-19,108;UBERON:0002390,9.38e-17,98;UBERON:0003061,9.38e-17,98;UBERON:0002371,2.44e-15,76;UBERON:0001474,5.18e-14,82;UBERON:0004765,1.62e-12,90;UBERON:0001434,5.58e-11,100;UBERON:0004177,2.25e-08,7;UBERON:0005057,2.25e-08,7;UBERON:0002372,1.69e-07,1;UBERON:0001961,1.69e-07,1;UBERON:0001744,1.69e-07,1;UBERON:0001735,1.69e-07,1;UBERON:0001154,1.91e-07,1;UBERON:0001153,1.91e-07,1;UBERON:0001045,1.91e-07,1;UBERON:0000029,2.17e-07,1;UBERON:0003081,3.40e-07,203;UBERON:0002370,6.46e-07,4;UBERON:0005058,6.46e-07,4;UBERON:0009113,6.46e-07,4;UBERON:0003295,6.46e-07,4;UBERON:0005562,6.46e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,3.81680571135301,0,0,0,1.79132379391939,1.6194683300949,2.57575567634187,0.145398238779565,0,0.485168122375632,0,0,1.23882548358041,0,0.256160706529101,0,0,0,0,0,0,0.674170453335254,0,0.320929027076094,0,0.329851300186716,0.199463657621632,0.852449501065388,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0.316462387440884,0.633765858935825,0.637812899895131,0.838634582033504,0.22465726229299,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95076127162616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,2.59637914923747,4.87563264437948,4.52057065764142,8.10868122638163,10.8679033048224,10.0293525358983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,3.01354254859276,2.10833939483032,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,2.28234679033192,0,0,0.169291777801603,0.642352300414798,12.915181260227,0.425846237690326,0.343505344755765,0,1.3420566473545,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,1.65770349318689,0,0,0,0,0,0,4.09257896181497,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94226116468806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0247650239635,0.77380195455795,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.65094895634227,1.46151324344699,5.72478879895455,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.463044948647668,1.09279780251979,0,0,0,0,0,0,0,0.469919589899268,2.19156819110162,0.0999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,1.48554492622814,1.24149428591716,0,0,0.202117188958219,0.217716747896961,0.342233301085281,1.95320953742304,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,2.41528552309231,0 | |||
|short_description=p4@TIFAB | |||
}} |
Revision as of 07:32, 22 January 2014
Short description: | p4@TIFAB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TIFAB_5end |
Coexpression cluster: | C4466_acute_biphenotypic_Dendritic_Monocytederived_migratory_granulocyte_CD34 |
Association with transcript: | 83bp_to_ENST00000537858, NM_001099221, uc003law.3_5end |
EntrezGene: | TIFAB |
HGNC: | 34024 |
UniProt: | Q6ZNK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dendritic cell | 8.68e-57 | 10 |
conventional dendritic cell | 2.75e-44 | 8 |
immature conventional dendritic cell | 1.19e-26 | 5 |
common dendritic progenitor | 1.19e-26 | 5 |
plasmacytoid dendritic cell | 1.19e-20 | 3 |
Langerhans cell | 1.83e-20 | 5 |
adult endothelial progenitor cell | 3.76e-19 | 3 |
myeloid cell | 4.25e-19 | 108 |
common myeloid progenitor | 4.25e-19 | 108 |
granulocyte monocyte progenitor cell | 2.57e-15 | 67 |
hematopoietic stem cell | 2.68e-15 | 168 |
macrophage dendritic cell progenitor | 1.60e-14 | 61 |
hematopoietic cell | 2.73e-14 | 177 |
monopoietic cell | 9.09e-13 | 59 |
monocyte | 9.09e-13 | 59 |
monoblast | 9.09e-13 | 59 |
promonocyte | 9.09e-13 | 59 |
hematopoietic oligopotent progenitor cell | 1.64e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-11 | 161 |
leukocyte | 3.09e-11 | 136 |
myeloid lineage restricted progenitor cell | 3.38e-11 | 66 |
macrophage | 3.60e-10 | 6 |
myeloid leukocyte | 4.30e-10 | 72 |
CD34-positive, CD38-negative hematopoietic stem cell | 9.44e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.93e-22 | 93 |
hemolymphoid system | 8.60e-19 | 108 |
hematopoietic system | 9.38e-17 | 98 |
blood island | 9.38e-17 | 98 |
bone marrow | 2.44e-15 | 76 |
bone element | 5.18e-14 | 82 |
skeletal element | 1.62e-12 | 90 |
skeletal system | 5.58e-11 | 100 |
hemopoietic organ | 2.25e-08 | 7 |
immune organ | 2.25e-08 | 7 |
tonsil | 1.69e-07 | 1 |
mucosa-associated lymphoid tissue | 1.69e-07 | 1 |
lymphoid tissue | 1.69e-07 | 1 |
tonsillar ring | 1.69e-07 | 1 |
vermiform appendix | 1.91e-07 | 1 |
caecum | 1.91e-07 | 1 |
midgut | 1.91e-07 | 1 |
lymph node | 2.17e-07 | 1 |
lateral plate mesoderm | 3.40e-07 | 203 |
thymus | 6.46e-07 | 4 |
hemolymphoid system gland | 6.46e-07 | 4 |
thymic region | 6.46e-07 | 4 |
pharyngeal gland | 6.46e-07 | 4 |
thymus primordium | 6.46e-07 | 4 |