FFCP PHASE1:Hg19::chr5:133945416..133945452,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1314 | |||
|description=CAGE_peak_at_chr5:133945416..133945452,- | |||
|id=chr5:133945416..133945452,- | |||
|ontology_enrichment_celltype=CL:0002178!6.87e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.94e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.94e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.33e-28;13!UBERON:0001041;9.03e-22;30!UBERON:0004161;1.88e-15;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;7.47e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,5.37e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0005409!9.96e-11!35;UBERON:0000160!4.48e-08!27;UBERON:0004921!1.87e-07!129;UBERON:0004185!1.87e-07!129;UBERON:0001007!8.91e-07!155;UBERON:0001555!8.91e-07!155;UBERON:0007026!8.91e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;3.99e-15;25!UBERON:0002394;2.53e-11;4!UBERON:0003928;2.53e-11;4!UBERON:0002107;2.17e-09;19!UBERON:0006925;2.17e-09;19!UBERON:0002294;5.08e-07;7!UBERON:0001173;5.08e-07;7!UBERON:0001871;6.21e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,4.60e-17,22;UBERON:0003894,4.60e-17,22;UBERON:0009854,2.31e-16,23;UBERON:0007499,3.99e-15,25;UBERON:0009497,3.99e-15,25;UBERON:0000015,3.99e-15,25;UBERON:0002423,3.99e-15,25;UBERON:0006235,3.99e-15,25;UBERON:0004161,3.99e-15,25;UBERON:0009856,1.41e-14,26;UBERON:0002107,2.17e-09,19;UBERON:0006925,2.17e-09,19;UBERON:0008836,2.17e-09,19;UBERON:0005911,2.05e-08,82;UBERON:0002394,5.54e-08,6;UBERON:0003928,5.54e-08,6;UBERON:0001041,5.76e-08,87;UBERON:0003929,1.99e-07,54;UBERON:0001871,6.39e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755798243562828,0,0,0,0,5.01259289091706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0.995261931078505,0.176915129006678,0,0.889563386041866,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0,0,0,3.74024429756045,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,1.53978154095896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr5:133945416..133945452,- | |||
}} |
Revision as of 07:28, 22 January 2014
Short description: | p@chr5:133945416..133945452, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:133945416..133945452, - |
Coexpression cluster: | C1314_bile_lung_hepatoma_Hepatocyte_Mast_choriocarcinoma_giant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.94e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 4.60e-17 | 22 |
liver primordium | 4.60e-17 | 22 |
digestive tract diverticulum | 2.31e-16 | 23 |
epithelial sac | 3.99e-15 | 25 |
epithelium of foregut-midgut junction | 3.99e-15 | 25 |
anatomical boundary | 3.99e-15 | 25 |
hepatobiliary system | 3.99e-15 | 25 |
foregut-midgut junction | 3.99e-15 | 25 |
septum transversum | 3.99e-15 | 25 |
sac | 1.41e-14 | 26 |
liver | 2.17e-09 | 19 |
digestive gland | 2.17e-09 | 19 |
liver bud | 2.17e-09 | 19 |
endo-epithelium | 2.05e-08 | 82 |
bile duct | 5.54e-08 | 6 |
digestive system duct | 5.54e-08 | 6 |
foregut | 5.76e-08 | 87 |
gut epithelium | 1.99e-07 | 54 |
temporal lobe | 6.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 5.37e-10 | 39 |