FFCP PHASE1:Hg19::chr5:132387633..132387673,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3308 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5237 | |||
|TSSclassifier=strong | |||
|UniProt=P34932,Q9BUK9,F5H3R0 | |||
|association_with_transcript=0bp_to_ENST00000304858,ENST00000321956,ENST00000537974,NM_002154,uc003kyj.2_5end | |||
|description=CAGE_peak_2_at_HSPA4_5end | |||
|id=chr5:132387633..132387673,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.37e-08;82 | |||
|ontology_enrichment_disease=DOID:14566!9.03e-14!239;DOID:162!3.02e-13!235;DOID:0050687!2.18e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,9.03e-14,239;DOID:162,3.02e-13,235;DOID:0050687,2.18e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.25e-25!94;UBERON:0001016!1.25e-25!94;UBERON:0005743!9.97e-25!86;UBERON:0001017!1.56e-24!82;UBERON:0001049!1.66e-21!57;UBERON:0005068!1.66e-21!57;UBERON:0006241!1.66e-21!57;UBERON:0007135!1.66e-21!57;UBERON:0000955!8.42e-21!69;UBERON:0006238!8.42e-21!69;UBERON:0002616!2.16e-19!59;UBERON:0003080!4.47e-18!42;UBERON:0002780!1.94e-17!41;UBERON:0001890!1.94e-17!41;UBERON:0006240!1.94e-17!41;UBERON:0002346!1.23e-16!90;UBERON:0007023!1.37e-16!115;UBERON:0003075!5.90e-16!86;UBERON:0007284!5.90e-16!86;UBERON:0000924!1.54e-15!173;UBERON:0006601!1.54e-15!173;UBERON:0004121!7.44e-15!169;UBERON:0002020!1.14e-14!34;UBERON:0003528!1.14e-14!34;UBERON:0001893!3.90e-14!34;UBERON:0002791!8.11e-14!33;UBERON:0001869!3.47e-13!32;UBERON:0003056!6.38e-12!61;UBERON:0000033!1.84e-11!123;UBERON:0000153!3.04e-11!129;UBERON:0007811!3.04e-11!129;UBERON:0002619!7.97e-10!22;UBERON:0000956!8.95e-10!25;UBERON:0000203!8.95e-10!25;UBERON:0001950!9.59e-09!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.29e-13;41!UBERON:0001890;8.29e-13;41!UBERON:0003528;1.95e-12;34!UBERON:0002020;1.95e-12;34!UBERON:0002791;2.80e-12;32!UBERON:0001869;5.73e-12;32!UBERON:0001893;6.23e-12;34!UBERON:0000073;1.44e-11;53!UBERON:0002616;1.44e-11;53!UBERON:0000955;9.33e-10;68!UBERON:0002619;9.96e-10;22!UBERON:0000956;1.08e-09;25!UBERON:0000203;1.08e-09;25!UBERON:0001017;3.43e-09;75!UBERON:0001016;5.55e-09;83!UBERON:0001950;1.21e-08;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.79e-25,89;UBERON:0001017,6.48e-24,81;UBERON:0001049,7.17e-21,56;UBERON:0005068,7.17e-21,56;UBERON:0006241,7.17e-21,56;UBERON:0007135,7.17e-21,56;UBERON:0000955,3.39e-20,68;UBERON:0006238,3.39e-20,68;UBERON:0000073,1.56e-19,53;UBERON:0002616,1.56e-19,53;UBERON:0002780,1.94e-17,41;UBERON:0001890,1.94e-17,41;UBERON:0003080,1.94e-17,41;UBERON:0006240,1.94e-17,41;UBERON:0007023,3.79e-16,114;UBERON:0002346,7.03e-16,86;UBERON:0003075,3.32e-15,82;UBERON:0007284,3.32e-15,82;UBERON:0003528,1.14e-14,34;UBERON:0002020,1.14e-14,34;UBERON:0004121,1.19e-14,171;UBERON:0000924,1.19e-14,171;UBERON:0006601,1.19e-14,171;UBERON:0001893,3.90e-14,34;UBERON:0002791,1.72e-13,32;UBERON:0011216,2.01e-13,223;UBERON:0001869,3.47e-13,32;UBERON:0010371,1.77e-12,104;UBERON:0010314,1.19e-11,132;UBERON:0003056,1.58e-11,61;UBERON:0002619,7.97e-10,22;UBERON:0000956,8.95e-10,25;UBERON:0000203,8.95e-10,25;UBERON:0001950,9.59e-09,20 | |||
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| |||
|short_description=p2@HSPA4 | |||
}} |
Revision as of 07:23, 22 January 2014
Short description: | p2@HSPA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HSPA4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000304858, ENST00000321956, ENST00000537974, NM_002154, uc003kyj.2_5end |
EntrezGene: | HSPA4 |
HGNC: | 5237 |
UniProt: | P34932Q9BUK9F5H3R0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 9.03e-14 | 239 |
cancer | 3.02e-13 | 235 |
cell type cancer | 2.18e-08 | 143 |