FFCP PHASE1:Hg19::chr5:125695881..125695907,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z6D8 | |||
|association_with_transcript=57bp_to_ENST00000513040_5end | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_18_at_GRAMD3_5end | |||
|id=chr5:125695881..125695907,+ | |||
|ontology_enrichment_celltype=CL:0000453!7.51e-19!5;CL:0002541!1.13e-11!3;CL:0000990!2.71e-10!8;CL:0001014!1.65e-08!2;CL:0001016!1.65e-08!2;CL:0000451!2.42e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000453;5.23e-48;5!CL:0000990;1.06e-26;8!CL:0000451;7.64e-22;10!CL:0001014;3.85e-20;2!CL:0001016;3.85e-20;2!CL:0002541;9.29e-14;3!CL:0000840;2.57e-07;5!CL:0000197;3.63e-07;6!CL:0000098;3.63e-07;6!CL:0002167;3.63e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,3.92e-48,5;CL:0000990,9.08e-27,8;CL:0000451,6.71e-22,10;CL:0001014,3.33e-20,2;CL:0001016,3.33e-20,2;CL:0002541,1.02e-13,3;CL:0000840,2.45e-07,5;CL:0001029,2.45e-07,5;CL:0000197,3.92e-07,6;CL:0000098,3.92e-07,6;CL:0002167,3.92e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.24e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;7.45e-11;1!DOID:4549;7.45e-11;1!DOID:5861;7.45e-11;1!DOID:6496;7.45e-11;1!DOID:3571;1.39e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.97e-11,1;DOID:4549,9.97e-11,1;DOID:5861,9.97e-11,1;DOID:6496,9.97e-11,1;DOID:3571,1.77e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.13e-11!3;UBERON:0000920!1.13e-11!3;UBERON:0005631!1.05e-08!14;UBERON:0000158!1.05e-08!14;UBERON:0003124!1.17e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.29e-14;3!UBERON:0000920;9.29e-14;3!UBERON:0001282;4.80e-11;1!UBERON:0009842;4.80e-11;1!UBERON:0003704;4.80e-11;1!UBERON:0001171;4.80e-11;1!UBERON:0001172;4.80e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.02e-13,3;UBERON:0003124,5.17e-13,7;UBERON:0001282,4.58e-11,1;UBERON:0009842,4.58e-11,1;UBERON:0003704,4.58e-11,1;UBERON:0001171,4.58e-11,1;UBERON:0001172,4.58e-11,1;UBERON:0005631,9.41e-07,14;UBERON:0000158,9.41e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,2.20783381047509,1.17141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30431961956303,0.69169171316418,0.269272933229316,0.651884231532048,2.23300811812344,0.915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,4.37004683161367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,2.02989091390451,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,2.59298636378669,0,0,0,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,30.1465014679011,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64513284963145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85465333544967,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0.219284049578707,0.530067437837643,0,0,0,0,0,0,2.33832370607266,7.04183653660824,4.41626564490779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81534561833168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.91878487268583,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0.193373663920732,0,0,0.705789743431384,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@GRAMD3 | |||
}} |
Revision as of 07:08, 22 January 2014
Short description: | p18@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_GRAMD3_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 57bp_to_ENST00000513040_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | B7Z6D8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 3.92e-48 | 5 |
conventional dendritic cell | 9.08e-27 | 8 |
dendritic cell | 6.71e-22 | 10 |
CD1a-positive Langerhans cell | 3.33e-20 | 2 |
immature CD1a-positive Langerhans cell | 3.33e-20 | 2 |
chorionic membrane mesenchymal stem cell | 1.02e-13 | 3 |
immature conventional dendritic cell | 2.45e-07 | 5 |
common dendritic progenitor | 2.45e-07 | 5 |
receptor cell | 3.92e-07 | 6 |
sensory epithelial cell | 3.92e-07 | 6 |
olfactory epithelial cell | 3.92e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.02e-13 | 3 |
chorion | 5.17e-13 | 7 |
intralobular bile duct | 4.58e-11 | 1 |
acinus | 4.58e-11 | 1 |
intrahepatic bile duct | 4.58e-11 | 1 |
portal lobule | 4.58e-11 | 1 |
hepatic acinus | 4.58e-11 | 1 |
extraembryonic membrane | 9.41e-07 | 14 |
membranous layer | 9.41e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.97e-11 | 1 |
extraosseous chondrosarcoma | 9.97e-11 | 1 |
myxoid chondrosarcoma | 9.97e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 9.97e-11 | 1 |
liver cancer | 1.77e-10 | 1 |