FFCP PHASE1:Hg19::chr5:95998746..95998764,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=831 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1515 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z468 | |||
|association_with_transcript=0bp_to_ENST00000508608,uc011cuo.1_5end | |||
|coexpression_cluster_id=C4533 | |||
|description=CAGE_peak_12_at_CAST_5end | |||
|id=chr5:95998746..95998764,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.01e-11!43;CL:0000223!5.86e-11!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.74e-09;42!CL:0002251;5.40e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.23e-11,42;CL:0000223,1.50e-10,58;CL:0002251,8.33e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.71e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.05e-15!169;UBERON:0000925!3.05e-15!169;UBERON:0006595!3.05e-15!169;UBERON:0001007!9.07e-14!155;UBERON:0001555!9.07e-14!155;UBERON:0007026!9.07e-14!155;UBERON:0003104!3.51e-11!238;UBERON:0009142!3.51e-11!238;UBERON:0004921!7.95e-11!129;UBERON:0004185!7.95e-11!129;UBERON:0000481!1.25e-10!347;UBERON:0000468!1.43e-10!659;UBERON:0001004!1.88e-10!72;UBERON:0000467!4.99e-10!625;UBERON:0000475!5.16e-10!365;UBERON:0000480!6.39e-10!626;UBERON:0000161!5.62e-09!35;UBERON:0000077!7.10e-09!130;UBERON:0003102!8.79e-09!95;UBERON:0002100!1.52e-08!216;UBERON:0000062!2.00e-08!511;UBERON:0000486!2.56e-08!82;UBERON:0002385!4.26e-08!63;UBERON:0001015!4.26e-08!63;UBERON:0000383!4.26e-08!63;UBERON:0002050!1.91e-07!605;UBERON:0005423!1.91e-07!605;UBERON:0001134!2.21e-07!61;UBERON:0002036!2.21e-07!61;UBERON:0003082!2.21e-07!61;UBERON:0000923!3.59e-07!604;UBERON:0005291!3.59e-07!604;UBERON:0006598!3.59e-07!604;UBERON:0002532!3.59e-07!604;UBERON:0000922!6.32e-07!612;UBERON:0000065!8.83e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.87e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.26e-15,160;UBERON:0000925,3.26e-15,160;UBERON:0006595,3.26e-15,160;UBERON:0001007,5.19e-14,145;UBERON:0001555,5.19e-14,145;UBERON:0007026,5.19e-14,145;UBERON:0004921,9.48e-13,118;UBERON:0001004,1.25e-10,74;UBERON:0000161,1.49e-08,36;UBERON:0000065,2.82e-07,54;UBERON:0003102,3.43e-07,99;UBERON:0001041,5.13e-07,87;UBERON:0000072,6.08e-07,47;UBERON:0002385,7.59e-07,64;UBERON:0001015,7.59e-07,64;UBERON:0000383,7.59e-07,64;UBERON:0002100,8.18e-07,199;UBERON:0001048,9.95e-07,160 | |||
|phase1_expression=2.90685406832891,3.21150785836475,2.39622486963151,6.00439790118782,2.68176656656373,4.36169262050184,0,0.631719873426831,6.52964070499596,0.491467873003018,0,1.31064823278103,0.527533956456907,0.247532705920093,0.994192127183747,1.34465029290355,1.20538905604795,2.19093027116212,1.46379839637152,0.492484232307152,1.22400414746552,1.88072832886853,2.28988789704845,2.6006140763848,0.376627918784408,0.0764134057479513,0,0,0.393364276848904,0.383829398097213,0.619264493264304,1.83884244895785,0.90361775633475,3.32778609150109,0.542270404062111,0,0.293600439334847,0,0.401088894940283,0,0,0,0,0.581592955118259,0,0,0.232429036905685,0,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0.545812300115692,0,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0.65156653411535,0.605399502633369,0.368277635987565,0.632924774881769,0.211255286311942,0,0,0.561643155732475,0.300353785683013,0,0.285012743741249,0.79566670879636,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0,0.196709770113833,0.393010762749165,1.64481199199607,0,1.95553359980154,0.473447805734733,1.94826728407911,0.222820913770347,2.06224135232386,0.664601683750863,0.812411591295047,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0.68725489096526,0.506039384039006,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0,1.41124720257313,0.802320587350522,0.289648807765598,2.43806866313962,1.34140171940727,0.511450247374121,2.53007406669196,1.50401373190767,2.462390822334,0,0.486634870302636,2.55244006342983,1.33037638477538,1.40535657109002,0.851363990735132,0.364295288292542,4.82019775619758,0,0,0,0,0,0,0.39752481473341,1.72046919021225,0.694281003215189,1.69592382577203,0.838998872419812,0.550236083880135,0,0.775250277507987,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.267899184852239,0,0.337834441449967,0,0,0.366403487860815,0,0,2.18047026071267,0.496971951695318,5.57174251324151,12.711281358069,1.14734648299525,1.41867352879343,2.80338800071154,1.06748995729705,0.74000264525148,1.24484414159907,0.942974704487816,0.326923806226917,1.05950199351452,0.576175924479999,0,0.936480230490962,1.1409436430889,0.298897361103602,0.704606991862589,0,0.280901613404497,1.02077085627447,0.245668634623536,1.23990937410919,1.18800285728205,0.494533858557114,0,0,0.673344455816265,0.250237039743928,2.21651292387346,0.877955241761676,0.919463387397059,0.751190294532984,2.60894021268048,1.25572744982203,0.427114777637135,1.27159140695737,1.20036438433761,0.618315175430633,1.8034837803194,1.8611685633159,7.93248761533951,3.70260619612555,1.26216887122057,0.460249493211497,1.13152239773168,0.710019185033229,1.30977727695932,1.3564847384839,2.89891279744945,4.09119180886252,13.1930113878942,0,0.265059536642971,0,0,0,0,0,0.643240938192885,2.76269842704961,3.71494342425583,2.88751792667834,5.32380600179297,5.73187946265546,6.50729780685401,4.74264082749294,4.57546832594053,3.08451804844426,5.39325232640658,4.70931516300831,5.00171304030308,0,0,0,0,6.33775174109154,3.9313088667105,2.36315962672562,0,5.16551441881077,1.3725424823882,26.0108176418443,2.24803506515239,0.904760751704678,2.4998880192803,0,0,4.3299402607582,1.507095264676,2.11335649624479,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0.93733833986777,4.19955320497149,4.39502801451398,6.35865511190223,4.94077695473735,6.9008882249738,0,0.704387472105808,5.39053100406007,3.31475892859011,3.53478813593864,0.190493682876507,0,0,1.71072446022705,0,0.300343057843917,0.285826432630578,0.112131084345361,0,0.5867062865676,0.387815147273333,0,0,1.06375246633948,1.04007436911366,0,0,0.532844358032199,0,1.08524321078289,0,0,0.355391948742546,0,2.71295439353627,2.61460037580088,1.29964888536674,0,0,0,1.19812427745791,0,14.2636905040718,1.73737568001095,1.64381058040307,1.79060963239896,0,0.788123040807709,2.58753089831421,0.513372145118994,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.736148950314839,0,0.542530047399471,2.49565033836969,1.78428988797162,1.57702415033935,5.62278791965023,1.20378439891088,4.5481500811197,1.03473071292505,1.32845119707087,0.368738337083406,0.955719759148911,0.195801157462741,0,0.206768026122887,0.431428401637234,0.106727557803444,0.909382714338778,0,0.604780586659361,1.73675465473144,1.53461973288062,1.12264037773229,5.89440086576224,4.09365799253363,2.0911009748669,7.42090332224955,0.308419387605311,1.24293207719189,2.46381468041427,2.59627214591811,1.62694529843943,7.00984807631409,25.0633087879106,6.62983120338454,0.803701137152247,0.546273504020151,2.22911505431021,0.451199612907412,1.5403067420883,0,0,0.422206515571503,0,0.170093705276516,0.647747748306418,0,0,0,0.509752546090077,0,0,0,0,0.256450125116389,0,0,2.36994326789761,0.732555718546747,0.495056999523528,1.72279661398852,3.90036147621913,0,0.773365746336976,0,0.614014698904518,0.137836572484531,1.6113036730241,0.580066775656914,0.340906509664404,0.890320356467374,7.27253627588304,3.0750410778417,2.5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| |||
|short_description=p12@CAST | |||
}} |
Revision as of 06:36, 22 January 2014
Short description: | p12@CAST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CAST_5end |
Coexpression cluster: | C4533_lung_gall_rectal_salivary_Prostate_Keratinocyte_amniotic |
Association with transcript: | 0bp_to_ENST00000508608, uc011cuo.1_5end |
EntrezGene: | CAST |
HGNC: | 1515 |
UniProt: | B7Z468 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.23e-11 | 42 |
endodermal cell | 1.50e-10 | 58 |
epithelial cell of alimentary canal | 8.33e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.26e-15 | 160 |
endoderm | 3.26e-15 | 160 |
presumptive endoderm | 3.26e-15 | 160 |
digestive system | 5.19e-14 | 145 |
digestive tract | 5.19e-14 | 145 |
primitive gut | 5.19e-14 | 145 |
subdivision of digestive tract | 9.48e-13 | 118 |
respiratory system | 1.25e-10 | 74 |
orifice | 1.49e-08 | 36 |
respiratory tract | 2.82e-07 | 54 |
surface structure | 3.43e-07 | 99 |
foregut | 5.13e-07 | 87 |
segment of respiratory tract | 6.08e-07 | 47 |
muscle tissue | 7.59e-07 | 64 |
musculature | 7.59e-07 | 64 |
musculature of body | 7.59e-07 | 64 |
trunk | 8.18e-07 | 199 |
primordium | 9.95e-07 | 160 |