FFCP PHASE1:Hg19::chr5:35852840..35852849,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3575 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6024 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=15bp_to_ENST00000511031_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_IL7R_5end | |||
|id=chr5:35852840..35852849,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.97e-39!140;CL:0002087!1.19e-34!119;CL:0002031!4.63e-33!124;CL:0002057!4.45e-30!42;CL:0002032!4.90e-30!165;CL:0000837!4.90e-30!165;CL:0000037!7.66e-30!172;CL:0000566!7.66e-30!172;CL:0000860!1.11e-27!45;CL:0000988!1.41e-27!182;CL:0002009!2.53e-27!65;CL:0002194!6.01e-26!63;CL:0000576!6.01e-26!63;CL:0000040!6.01e-26!63;CL:0000559!6.01e-26!63;CL:0000557!1.89e-24!71;CL:0000766!3.54e-24!76;CL:0000839!1.03e-22!70;CL:0000763!4.02e-20!112;CL:0000049!4.02e-20!112;CL:0000990!2.53e-17!8;CL:0000451!5.72e-14!10;CL:0000791!3.43e-12!18;CL:0000789!3.43e-12!18;CL:0002420!3.43e-12!18;CL:0002419!3.43e-12!18;CL:0000790!3.43e-12!18;CL:0000453!2.20e-11!5;CL:0000134!7.35e-10!358;CL:0000623!1.18e-09!3;CL:0000825!1.18e-09!3;CL:0000838!1.69e-09!52;CL:0002320!1.87e-09!365;CL:0000542!2.95e-09!53;CL:0000051!2.95e-09!53;CL:0000840!8.02e-09!5;CL:0001029!8.02e-09!5;CL:0000084!2.56e-08!25;CL:0000827!2.56e-08!25;CL:0000219!4.88e-08!390;CL:0000625!8.36e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.86e-47;33!CL:0002057;1.86e-47;33!CL:0000453;1.34e-33;5!CL:0000473;1.53e-33;39!CL:0000234;1.53e-33;39!CL:0000990;9.52e-29;8!CL:0000451;1.57e-23;10!CL:0000576;1.48e-19;48!CL:0000766;8.89e-16;69!CL:0002087;3.82e-10;104!CL:0000763;4.41e-08;100!CL:0000738;5.14e-08;136!CL:0000840;7.72e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.83e-40,42;CL:0002057,1.83e-40,42;CL:0002009,5.85e-36,61;CL:0000473,3.46e-35,48;CL:0000234,3.46e-35,48;CL:0000453,1.18e-33,5;CL:0000557,1.31e-32,67;CL:0002194,2.70e-32,59;CL:0000576,2.70e-32,59;CL:0000040,2.70e-32,59;CL:0000559,2.70e-32,59;CL:0000763,7.44e-29,108;CL:0000049,7.44e-29,108;CL:0000990,8.73e-29,8;CL:0000839,1.02e-28,66;CL:0000766,3.38e-26,72;CL:0000738,2.99e-25,136;CL:0000451,1.46e-23,10;CL:0002032,5.42e-21,161;CL:0000837,5.42e-21,161;CL:0000037,5.03e-20,168;CL:0002031,5.96e-20,120;CL:0000988,6.84e-19,177;CL:0002087,3.34e-18,115;CL:0000134,3.33e-08,354;CL:0002320,5.41e-08,361;CL:0000840,7.85e-08,5;CL:0001029,7.85e-08,5;CL:0000219,2.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-27;42!CL:0000049;1.07e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.71e-24!102;UBERON:0003061!4.71e-24!102;UBERON:0002193!1.04e-22!112;UBERON:0002371!6.02e-21!80;UBERON:0001474!5.09e-19!86;UBERON:0002405!6.97e-19!115;UBERON:0004765!3.29e-15!101;UBERON:0001434!3.29e-15!101;UBERON:0002384!6.62e-09!375;UBERON:0003081!6.42e-08!216;UBERON:0002370!3.38e-07!4;UBERON:0005058!3.38e-07!4;UBERON:0009113!3.38e-07!4;UBERON:0003295!3.38e-07!4;UBERON:0005562!3.38e-07!4;UBERON:0004177!8.19e-07!7;UBERON:0002204!9.77e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.48e-28,76;UBERON:0001474,2.42e-26,82;UBERON:0004765,7.65e-24,90;UBERON:0002405,5.15e-23,93;UBERON:0002390,9.58e-22,98;UBERON:0003061,9.58e-22,98;UBERON:0001434,2.84e-21,100;UBERON:0002193,1.49e-19,108;UBERON:0002204,6.52e-12,167;UBERON:0003081,2.08e-09,203;UBERON:0002384,1.05e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,1.23350366406548,0.619412741790207,0.575384784644301,0.768482119587302,0.47296445977717,2.06847408441971,2.5819387343353,4.06279459783025,0,0.545812300115692,0.449446968890169,2.14258724659632,6.09765151444578,1.91801137739712,0,0,0,8.12585868160035,13.6172453925874,9.9651559839292,0,0,0,16.9511860737343,13.6262725315399,13.9243450473989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0,1.24930726552346,0.236777252044017,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29818957461873,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.901940516486955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82455615637551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0,1.7537427795545,3.85308036908753,6.54261577023377,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452122368852043,0.124149428591716,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p5@IL7R | |||
}} |
Revision as of 05:02, 22 January 2014
Short description: | p5@IL7R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IL7R_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 15bp_to_ENST00000511031_5end |
EntrezGene: | IL7R |
HGNC: | 6024 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.83e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-40 | 42 |
macrophage dendritic cell progenitor | 5.85e-36 | 61 |
defensive cell | 3.46e-35 | 48 |
phagocyte | 3.46e-35 | 48 |
Langerhans cell | 1.18e-33 | 5 |
granulocyte monocyte progenitor cell | 1.31e-32 | 67 |
monopoietic cell | 2.70e-32 | 59 |
monocyte | 2.70e-32 | 59 |
monoblast | 2.70e-32 | 59 |
promonocyte | 2.70e-32 | 59 |
myeloid cell | 7.44e-29 | 108 |
common myeloid progenitor | 7.44e-29 | 108 |
conventional dendritic cell | 8.73e-29 | 8 |
myeloid lineage restricted progenitor cell | 1.02e-28 | 66 |
myeloid leukocyte | 3.38e-26 | 72 |
leukocyte | 2.99e-25 | 136 |
dendritic cell | 1.46e-23 | 10 |
hematopoietic oligopotent progenitor cell | 5.42e-21 | 161 |
hematopoietic multipotent progenitor cell | 5.42e-21 | 161 |
hematopoietic stem cell | 5.03e-20 | 168 |
hematopoietic lineage restricted progenitor cell | 5.96e-20 | 120 |
hematopoietic cell | 6.84e-19 | 177 |
nongranular leukocyte | 3.34e-18 | 115 |
mesenchymal cell | 3.33e-08 | 354 |
connective tissue cell | 5.41e-08 | 361 |
immature conventional dendritic cell | 7.85e-08 | 5 |
common dendritic progenitor | 7.85e-08 | 5 |
motile cell | 2.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.48e-28 | 76 |
bone element | 2.42e-26 | 82 |
skeletal element | 7.65e-24 | 90 |
immune system | 5.15e-23 | 93 |
hematopoietic system | 9.58e-22 | 98 |
blood island | 9.58e-22 | 98 |
skeletal system | 2.84e-21 | 100 |
hemolymphoid system | 1.49e-19 | 108 |
musculoskeletal system | 6.52e-12 | 167 |
lateral plate mesoderm | 2.08e-09 | 203 |
connective tissue | 1.05e-07 | 371 |