FFCP PHASE1:Hg19::chr4:169022528..169022531,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:169022528..169022531,+ | |||
|id=chr4:169022528..169022531,+ | |||
|ontology_enrichment_celltype=CL:0000359!1.10e-17!32;CL:0002592!7.90e-17!3;CL:0000192!2.46e-13!42;CL:0000514!2.46e-13!42;CL:0002591!2.95e-13!1;CL:0000187!3.17e-13!54;CL:0000680!1.74e-12!57;CL:0000056!1.74e-12!57;CL:0000355!1.74e-12!57;CL:0000183!4.94e-12!59;CL:0002494!5.77e-12!16;CL:0000393!8.11e-12!60;CL:0000211!8.11e-12!60;CL:0002595!1.33e-10!5;CL:0000055!1.18e-07!180;CL:0002596!2.15e-07!2;CL:0002593!2.58e-07!2;CL:0002583!4.69e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002591;7.06e-34;1!CL:0002595;2.72e-27;5!CL:0000359;5.86e-25;32!CL:0002596;5.48e-18;2!CL:0002593;1.07e-17;2!CL:0000192;7.62e-16;43!CL:0002592;2.31e-12;3!CL:0000322;2.89e-12;3!CL:0000393;4.00e-11;61!CL:0000211;4.00e-11;61!CL:0000187;6.19e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,9.85e-34,1;CL:0002595,2.38e-27,5;CL:0000359,3.52e-26,32;CL:0000192,1.22e-19,43;CL:0000514,1.22e-19,43;CL:0002596,5.48e-18,2;CL:0002593,9.07e-18,2;CL:0000187,1.78e-15,55;CL:0000680,1.05e-14,58;CL:0000056,1.05e-14,58;CL:0000355,1.05e-14,58;CL:0000393,5.26e-14,61;CL:0000211,5.26e-14,61;CL:0002592,2.31e-12,3;CL:0000322,2.89e-12,3;CL:0000222,2.91e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;7.62e-16;43!CL:0000355;2.99e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003498!5.48e-22!5;UBERON:0005985!5.48e-22!5;UBERON:0001637!2.87e-17!42;UBERON:0003509!2.87e-17!42;UBERON:0004572!2.87e-17!42;UBERON:0004573!4.66e-17!33;UBERON:0004571!4.66e-17!33;UBERON:0001621!7.90e-17!3;UBERON:0004872!8.58e-13!84;UBERON:0000948!3.56e-12!24;UBERON:0005498!3.56e-12!24;UBERON:0004140!3.56e-12!24;UBERON:0009881!3.56e-12!24;UBERON:0004141!3.56e-12!24;UBERON:0003084!3.56e-12!24;UBERON:0007005!3.56e-12!24;UBERON:0004139!3.56e-12!24;UBERON:0004291!3.56e-12!24;UBERON:0001981!7.75e-12!60;UBERON:0007500!7.75e-12!60;UBERON:0004537!7.75e-12!60;UBERON:0006965!7.75e-12!60;UBERON:0001134!1.31e-11!61;UBERON:0002036!1.31e-11!61;UBERON:0003082!1.31e-11!61;UBERON:0002385!3.26e-11!63;UBERON:0001015!3.26e-11!63;UBERON:0000383!3.26e-11!63;UBERON:0007100!8.14e-11!27;UBERON:0003914!1.14e-10!118;UBERON:0003834!1.33e-10!5;UBERON:0001533!1.33e-10!5;UBERON:0000055!3.52e-10!69;UBERON:0004290!5.27e-10!70;UBERON:0004535!1.84e-09!110;UBERON:0001009!3.55e-09!113;UBERON:0002049!8.87e-09!79;UBERON:0007798!8.87e-09!79;UBERON:0000486!2.07e-08!82;UBERON:0000914!2.68e-08!83;UBERON:0002329!2.68e-08!83;UBERON:0003077!2.68e-08!83;UBERON:0003059!2.68e-08!83;UBERON:0007282!2.68e-08!83;UBERON:0009618!2.68e-08!83;UBERON:0007285!2.68e-08!83;UBERON:0005396!2.15e-07!2;UBERON:0002456!2.58e-07!2;UBERON:0007497!2.91e-07!2;UBERON:0003643!2.91e-07!2;UBERON:0003504!2.91e-07!2;UBERON:0003469!2.91e-07!2;UBERON:0003496!2.91e-07!2;UBERON:0004797!2.91e-07!2;UBERON:0002012!2.91e-07!2;UBERON:0008886!2.91e-07!2;UBERON:0007303!2.91e-07!2;UBERON:0002061!2.91e-07!2;UBERON:0005432!2.91e-07!2;UBERON:0004363!2.91e-07!2;UBERON:0003513!6.06e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;2.72e-27;5!UBERON:0001533;2.72e-27;5!UBERON:0003513;7.84e-20;7!UBERON:0005396;5.48e-18;2!UBERON:0000078;1.07e-17;2!UBERON:0002012;1.07e-17;2!UBERON:0002456;1.07e-17;2!UBERON:0008886;1.07e-17;2!UBERON:0004573;3.32e-15;33!UBERON:0004571;3.32e-15;33!UBERON:0001637;3.10e-14;42!UBERON:0003509;3.10e-14;42!UBERON:0004572;3.10e-14;42!UBERON:0003498;2.31e-12;3!UBERON:0005985;2.31e-12;3!UBERON:0001621;2.31e-12;3!UBERON:0004821;2.89e-12;3!UBERON:0007499;2.89e-12;3!UBERON:0003215;2.89e-12;3!UBERON:0010368;2.89e-12;3!UBERON:0009911;2.89e-12;3!UBERON:0002299;2.89e-12;3!UBERON:0006524;2.89e-12;3!UBERON:0008874;2.89e-12;3!UBERON:0002169;2.89e-12;3!UBERON:0004894;2.89e-12;3!UBERON:0009856;1.57e-09;4!UBERON:0003914;2.22e-09;74!UBERON:0007500;6.39e-08;56!UBERON:0001981;6.39e-08;56!UBERON:0004537;6.39e-08;56!UBERON:0000025;6.51e-08;93!UBERON:0000055;3.61e-07;65!UBERON:0002049;9.65e-07;75!UBERON:0007798;9.65e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,2.38e-27,5;UBERON:0001533,2.38e-27,5;UBERON:0003498,3.55e-27,5;UBERON:0005985,3.55e-27,5;UBERON:0001637,4.29e-20,42;UBERON:0003509,4.29e-20,42;UBERON:0004572,4.29e-20,42;UBERON:0003513,7.13e-20,7;UBERON:0005396,5.48e-18,2;UBERON:0002456,9.07e-18,2;UBERON:0000078,1.27e-17,2;UBERON:0007497,1.27e-17,2;UBERON:0003643,1.27e-17,2;UBERON:0003504,1.27e-17,2;UBERON:0003469,1.27e-17,2;UBERON:0003496,1.27e-17,2;UBERON:0002012,1.27e-17,2;UBERON:0008886,1.27e-17,2;UBERON:0007303,1.27e-17,2;UBERON:0002061,1.27e-17,2;UBERON:0005432,1.27e-17,2;UBERON:0004363,1.27e-17,2;UBERON:0004573,1.24e-16,33;UBERON:0004571,1.24e-16,33;UBERON:0007500,1.83e-14,59;UBERON:0001981,1.83e-14,59;UBERON:0004537,1.83e-14,59;UBERON:0006965,1.83e-14,59;UBERON:0001134,8.69e-14,62;UBERON:0002036,8.69e-14,62;UBERON:0003082,8.69e-14,62;UBERON:0002385,2.26e-13,64;UBERON:0001015,2.26e-13,64;UBERON:0000383,2.26e-13,64;UBERON:0000055,1.30e-12,68;UBERON:0001621,2.31e-12,3;UBERON:0004821,2.89e-12,3;UBERON:0003215,2.89e-12,3;UBERON:0010368,2.89e-12,3;UBERON:0009911,2.89e-12,3;UBERON:0002299,2.89e-12,3;UBERON:0006524,2.89e-12,3;UBERON:0008874,2.89e-12,3;UBERON:0002169,2.89e-12,3;UBERON:0004894,2.89e-12,3;UBERON:0004145,3.24e-12,3;UBERON:0002329,4.22e-12,71;UBERON:0003059,4.22e-12,71;UBERON:0007282,4.22e-12,71;UBERON:0004290,4.22e-12,71;UBERON:0009618,4.22e-12,71;UBERON:0003077,6.12e-12,72;UBERON:0007285,6.12e-12,72;UBERON:0007524,8.79e-12,73;UBERON:0002049,4.68e-11,78;UBERON:0007503,4.68e-11,78;UBERON:0007798,4.68e-11,78;UBERON:0003914,1.41e-10,117;UBERON:0000486,2.04e-10,83;UBERON:0004872,2.04e-10,83;UBERON:0000490,1.95e-08,148;UBERON:0004535,5.03e-08,109;UBERON:0001009,8.07e-08,112;UBERON:0005256,3.31e-07,122;UBERON:0010188,9.49e-07,6;UBERON:0002539,9.49e-07,6;UBERON:0003351,9.49e-07,6;UBERON:0008816,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,8.90969094192623,0,0,0,0,0.606547444719948,3.17020642346017,0,0,1.94970791705028,0,0,0,1.13008116620243,6.06501877900737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0.302461847526478,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:169022528..169022531,+ | |||
}} |
Revision as of 03:53, 22 January 2014
Short description: | p@chr4:169022528..169022531, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:169022528..169022531, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 9.85e-34 | 1 |
smooth muscle cell of the subclavian artery | 2.38e-27 | 5 |
vascular associated smooth muscle cell | 3.52e-26 | 32 |
smooth muscle cell | 1.22e-19 | 43 |
smooth muscle myoblast | 1.22e-19 | 43 |
smooth muscle cell of the carotid artery | 5.48e-18 | 2 |
smooth muscle cell of the internal thoracic artery | 9.07e-18 | 2 |
muscle cell | 1.78e-15 | 55 |
muscle precursor cell | 1.05e-14 | 58 |
myoblast | 1.05e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.05e-14 | 58 |
electrically responsive cell | 5.26e-14 | 61 |
electrically active cell | 5.26e-14 | 61 |
smooth muscle cell of the coronary artery | 2.31e-12 | 3 |
pneumocyte | 2.89e-12 | 3 |
mesodermal cell | 2.91e-07 | 121 |