FFCP PHASE1:Hg19::chr4:145567059..145567099,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000503066_5end | |||
|coexpression_cluster_id=C2581 | |||
|description=CAGE_peak_1_at_ENST00000503066_5end | |||
|id=chr4:145567059..145567099,- | |||
|ontology_enrichment_celltype=CL:0000222!3.87e-28!119;CL:0000183!2.22e-18!59;CL:0002139!3.95e-18!24;CL:0000115!8.06e-17!35;CL:0000359!1.13e-16!32;CL:0000680!1.36e-16!57;CL:0000056!1.36e-16!57;CL:0000355!1.36e-16!57;CL:0000187!7.97e-16!54;CL:0000192!1.21e-15!42;CL:0000514!1.21e-15!42;CL:0002078!1.52e-14!44;CL:0000055!2.46e-14!180;CL:0000071!2.65e-14!18;CL:0002546!2.65e-14!18;CL:0000393!2.01e-12!60;CL:0000211!2.01e-12!60;CL:0000213!4.74e-12!57;CL:0000215!4.74e-12!57;CL:1000413!4.74e-08!9;CL:0000220!1.56e-07!246;CL:0002321!1.57e-07!248;CL:0002494!7.56e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.85e-23;24!CL:0000359;1.25e-19;32!CL:0000115;1.87e-19;36!CL:0000071;2.09e-18;18!CL:0002078;1.64e-14;45!CL:0000192;5.49e-13;43!CL:1000413;3.79e-10;9!CL:0000213;4.25e-10;58!CL:0000215;4.25e-10;58!CL:0000187;3.33e-08;55!CL:0002539;8.49e-08;10!CL:0002494;1.29e-07;16!CL:0002544;2.35e-07;6!CL:0002543;3.46e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.13e-33,121;CL:0002139,1.94e-23,24;CL:0000115,4.97e-23,36;CL:0002078,5.19e-21,45;CL:0000359,1.17e-20,32;CL:0000071,2.22e-18,18;CL:0002546,2.22e-18,18;CL:0000192,9.68e-18,43;CL:0000514,9.68e-18,43;CL:0000213,1.84e-16,58;CL:0000215,1.84e-16,58;CL:0000680,8.01e-16,58;CL:0000056,8.01e-16,58;CL:0000355,8.01e-16,58;CL:0000187,2.00e-15,55;CL:0000393,1.68e-12,61;CL:0000211,1.68e-12,61;CL:1000413,3.95e-10,9;CL:0002321,1.67e-09,250;CL:0002539,7.86e-08,10;CL:0002494,1.34e-07,16;CL:0002544,2.42e-07,6;CL:0002543,3.55e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.09e-18;18!CL:0000514;5.49e-13;43!CL:0000222;5.93e-09;121!CL:0000355;7.78e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.84e-37!79;UBERON:0007798!1.84e-37!79;UBERON:0000025!1.44e-33!194;UBERON:0000055!2.00e-33!69;UBERON:0000477!4.14e-31!286;UBERON:0004111!6.89e-31!241;UBERON:0004872!2.54e-30!84;UBERON:0001981!3.24e-30!60;UBERON:0007500!3.24e-30!60;UBERON:0004537!3.24e-30!60;UBERON:0006965!3.24e-30!60;UBERON:0004535!1.27e-29!110;UBERON:0003914!1.08e-28!118;UBERON:0000119!1.23e-28!312;UBERON:0001009!4.63e-28!113;UBERON:0000483!3.45e-27!309;UBERON:0001637!8.21e-24!42;UBERON:0003509!8.21e-24!42;UBERON:0004572!8.21e-24!42;UBERON:0000490!1.04e-19!138;UBERON:0004573!3.52e-18!33;UBERON:0004571!3.52e-18!33;UBERON:0002385!1.42e-16!63;UBERON:0001015!1.42e-16!63;UBERON:0000383!1.42e-16!63;UBERON:0001134!2.35e-16!61;UBERON:0002036!2.35e-16!61;UBERON:0003082!2.35e-16!61;UBERON:0001986!2.65e-14!18;UBERON:0004638!2.65e-14!18;UBERON:0004852!2.65e-14!18;UBERON:0004290!2.78e-14!70;UBERON:0000481!2.99e-14!347;UBERON:0006914!7.17e-13!25;UBERON:0005256!3.19e-12!143;UBERON:0000914!3.33e-12!83;UBERON:0002329!3.33e-12!83;UBERON:0003077!3.33e-12!83;UBERON:0003059!3.33e-12!83;UBERON:0007282!3.33e-12!83;UBERON:0009618!3.33e-12!83;UBERON:0007285!3.33e-12!83;UBERON:0000487!3.90e-12!22;UBERON:0000947!7.91e-12!21;UBERON:0010191!7.91e-12!21;UBERON:0000486!1.92e-11!82;UBERON:0000475!6.19e-11!365;UBERON:0000468!9.42e-10!659;UBERON:0002616!6.09e-09!59;UBERON:0000922!6.92e-09!612;UBERON:0003103!7.63e-09!69;UBERON:0002050!1.83e-08!605;UBERON:0005423!1.83e-08!605;UBERON:0000923!2.61e-08!604;UBERON:0005291!2.61e-08!604;UBERON:0006598!2.61e-08!604;UBERON:0002532!2.61e-08!604;UBERON:0000467!4.41e-08!625;UBERON:0003915!4.74e-08!9;UBERON:0004700!4.74e-08!9;UBERON:0001917!4.74e-08!9;UBERON:0002100!4.89e-08!216;UBERON:0001049!5.66e-08!57;UBERON:0005068!5.66e-08!57;UBERON:0006241!5.66e-08!57;UBERON:0007135!5.66e-08!57;UBERON:0000480!6.31e-08!626;UBERON:0000955!6.46e-08!69;UBERON:0006238!6.46e-08!69;UBERON:0003075!2.90e-07!86;UBERON:0007284!2.90e-07!86;UBERON:0002346!9.89e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.18e-21;42!UBERON:0003509;1.18e-21;42!UBERON:0004572;1.18e-21;42!UBERON:0007500;1.93e-21;56!UBERON:0001981;1.93e-21;56!UBERON:0004537;1.93e-21;56!UBERON:0000055;3.35e-20;65!UBERON:0004573;7.25e-20;33!UBERON:0004571;7.25e-20;33!UBERON:0002049;2.62e-19;75!UBERON:0007798;2.62e-19;75!UBERON:0004638;2.09e-18;18!UBERON:0001986;2.09e-18;18!UBERON:0004852;2.09e-18;18!UBERON:0003914;2.05e-17;74!UBERON:0006914;4.02e-16;25!UBERON:0000487;2.85e-15;22!UBERON:0000947;2.22e-14;21!UBERON:0010191;2.22e-14;21!UBERON:0004535;7.18e-11;109!UBERON:0000490;9.79e-11;33!UBERON:0001009;1.36e-10;112!UBERON:0003915;3.79e-10;9!UBERON:0004700;3.79e-10;9!UBERON:0001917;3.79e-10;9!UBERON:0000025;6.48e-10;93!UBERON:0010260;6.63e-08;9!UBERON:0004237;8.49e-08;10!UBERON:0004695;8.49e-08;10!UBERON:0002111;8.49e-08;10!UBERON:0004178;8.49e-08;10!UBERON:0003513;5.38e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.17e-44,78;UBERON:0007798,1.17e-44,78;UBERON:0000055,2.51e-39,68;UBERON:0004535,2.66e-36,109;UBERON:0007500,1.00e-35,59;UBERON:0001981,1.00e-35,59;UBERON:0004537,1.00e-35,59;UBERON:0006965,1.00e-35,59;UBERON:0001009,1.94e-34,112;UBERON:0004872,2.11e-34,83;UBERON:0003914,3.02e-32,117;UBERON:0000025,5.90e-31,192;UBERON:0001637,3.19e-29,42;UBERON:0003509,3.19e-29,42;UBERON:0004572,3.19e-29,42;UBERON:0004111,3.56e-27,240;UBERON:0000119,1.54e-25,309;UBERON:0000483,5.98e-24,306;UBERON:0004573,7.89e-22,33;UBERON:0004571,7.89e-22,33;UBERON:0004638,2.22e-18,18;UBERON:0001986,2.22e-18,18;UBERON:0004852,2.22e-18,18;UBERON:0000490,4.08e-18,148;UBERON:0007503,1.88e-16,78;UBERON:0006914,3.06e-16,25;UBERON:0001134,1.62e-15,62;UBERON:0002036,1.62e-15,62;UBERON:0003082,1.62e-15,62;UBERON:0002385,2.54e-15,64;UBERON:0001015,2.54e-15,64;UBERON:0000383,2.54e-15,64;UBERON:0000487,2.91e-15,22;UBERON:0000947,2.51e-14,21;UBERON:0010191,2.51e-14,21;UBERON:0002329,4.13e-13,71;UBERON:0003059,4.13e-13,71;UBERON:0007282,4.13e-13,71;UBERON:0004290,4.13e-13,71;UBERON:0009618,4.13e-13,71;UBERON:0003104,8.73e-13,160;UBERON:0009142,8.73e-13,160;UBERON:0003077,1.03e-12,72;UBERON:0007285,1.03e-12,72;UBERON:0007524,2.50e-12,73;UBERON:0005256,1.15e-11,122;UBERON:0000486,7.23e-11,83;UBERON:0003915,3.95e-10,9;UBERON:0004700,3.95e-10,9;UBERON:0001917,3.95e-10,9;UBERON:0003081,2.27e-08,203;UBERON:0010260,6.46e-08,9;UBERON:0004237,7.86e-08,10;UBERON:0004695,7.86e-08,10;UBERON:0002111,7.86e-08,10;UBERON:0004178,7.86e-08,10;UBERON:0000926,1.27e-07,315;UBERON:0004120,1.27e-07,315;UBERON:0006603,1.27e-07,315;UBERON:0003103,2.50e-07,68;UBERON:0003513,5.13e-07,7 | |||
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| |||
|short_description=p1@ENST00000503066 | |||
}} |
Revision as of 03:19, 22 January 2014
Short description: | p1@ENST00000503066 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000503066_5end |
Coexpression cluster: | C2581_Renal_Endothelial_extraskeletal_Hepatic_Lymphatic_Mesenchymal_Smooth |
Association with transcript: | 0bp_to_ENST00000503066_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.13e-33 | 121 |
endothelial cell of vascular tree | 1.94e-23 | 24 |
endothelial cell | 4.97e-23 | 36 |
meso-epithelial cell | 5.19e-21 | 45 |
vascular associated smooth muscle cell | 1.17e-20 | 32 |
blood vessel endothelial cell | 2.22e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.22e-18 | 18 |
smooth muscle cell | 9.68e-18 | 43 |
smooth muscle myoblast | 9.68e-18 | 43 |
lining cell | 1.84e-16 | 58 |
barrier cell | 1.84e-16 | 58 |
muscle precursor cell | 8.01e-16 | 58 |
myoblast | 8.01e-16 | 58 |
multi-potent skeletal muscle stem cell | 8.01e-16 | 58 |
muscle cell | 2.00e-15 | 55 |
electrically responsive cell | 1.68e-12 | 61 |
electrically active cell | 1.68e-12 | 61 |
endothelial cell of artery | 3.95e-10 | 9 |
embryonic cell | 1.67e-09 | 250 |
aortic smooth muscle cell | 7.86e-08 | 10 |
cardiocyte | 1.34e-07 | 16 |
aortic endothelial cell | 2.42e-07 | 6 |
vein endothelial cell | 3.55e-07 | 6 |