FFCP PHASE1:Hg19::chr4:106066712..106066728,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25941 | |||
|TSSclassifier=weak | |||
|UniProt=Q6N021 | |||
|association_with_transcript=-303bp_to_ENST00000305737,NM_017628_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_TET2_5end | |||
|id=chr4:106066712..106066728,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.82e-76!42;CL:0000860!1.72e-70!45;CL:0000766!9.91e-69!76;CL:0000738!7.78e-59!140;CL:0000557!1.14e-56!71;CL:0000839!3.06e-52!70;CL:0002009!1.69e-51!65;CL:0002194!4.62e-48!63;CL:0000576!4.62e-48!63;CL:0000040!4.62e-48!63;CL:0000559!4.62e-48!63;CL:0000037!6.10e-46!172;CL:0000566!6.10e-46!172;CL:0000763!1.44e-45!112;CL:0000049!1.44e-45!112;CL:0002031!1.67e-43!124;CL:0000988!2.35e-42!182;CL:0002032!1.39e-40!165;CL:0000837!1.39e-40!165;CL:0002087!5.03e-40!119;CL:0000094!6.02e-17!8;CL:0002320!1.14e-13!365;CL:0000134!1.29e-13!358;CL:0000081!7.35e-12!11;CL:0000219!7.40e-11!390;CL:0002393!7.54e-11!9;CL:0002397!7.54e-11!9;CL:0000048!8.19e-09!430;CL:0000034!1.68e-08!444;CL:0000723!1.89e-08!436;CL:0002274!1.64e-07!5;CL:0000457!1.64e-07!5;CL:0002191!1.64e-07!5;CL:0000097!1.64e-07!5;CL:0000831!1.64e-07!5;CL:0002028!1.64e-07!5;CL:0000767!2.73e-07!3;CL:0000775!3.16e-07!3;CL:0000842!6.98e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.52e-83;33!CL:0002057;3.52e-83;33!CL:0000473;6.22e-55;39!CL:0000234;6.22e-55;39!CL:0000576;7.32e-51;48!CL:0000766;1.41e-44;69!CL:0000094;1.03e-21;8!CL:0000763;4.00e-19;100!CL:0002087;1.45e-16;104!CL:0000081;1.59e-15;11!CL:0002393;3.72e-15;6!CL:0002397;3.72e-15;6!CL:0000738;4.35e-14;136!CL:0000097;4.41e-12;5!CL:0000767;3.30e-11;3!CL:0000771;8.91e-09;2!CL:0000988;1.58e-08;177!CL:0001014;3.70e-08;2!CL:0001016;3.70e-08;2!CL:0000163;9.95e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.17e-97,42;CL:0002057,9.17e-97,42;CL:0000766,2.00e-95,72;CL:0000473,1.33e-83,48;CL:0000234,1.33e-83,48;CL:0000557,5.24e-80,67;CL:0000839,5.17e-73,66;CL:0002009,8.23e-71,61;CL:0000763,1.19e-66,108;CL:0000049,1.19e-66,108;CL:0002194,3.58e-65,59;CL:0000576,3.58e-65,59;CL:0000040,3.58e-65,59;CL:0000559,3.58e-65,59;CL:0000738,1.10e-63,136;CL:0000037,1.28e-49,168;CL:0002031,8.18e-48,120;CL:0002032,1.00e-47,161;CL:0000837,1.00e-47,161;CL:0000988,1.42e-46,177;CL:0002087,3.74e-40,115;CL:0000094,5.91e-22,8;CL:0000134,5.62e-18,354;CL:0002320,2.04e-17,361;CL:0000081,1.07e-15,11;CL:0000219,1.90e-15,386;CL:0000034,4.20e-13,441;CL:0000048,4.87e-13,427;CL:0000723,1.05e-12,433;CL:0000097,4.11e-12,5;CL:0002028,4.11e-12,5;CL:0000767,1.92e-11,3;CL:0002393,6.53e-10,9;CL:0002397,6.53e-10,9;CL:0000771,8.42e-09,2;CL:0001014,3.77e-08,2;CL:0001016,3.77e-08,2;CL:0000163,9.58e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-69;42!CL:0000049;5.52e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.63e-56!102;UBERON:0003061!2.63e-56!102;UBERON:0002371!4.57e-51!80;UBERON:0002193!8.45e-50!112;UBERON:0001474!1.64e-46!86;UBERON:0002405!8.47e-39!115;UBERON:0004765!1.72e-37!101;UBERON:0001434!1.72e-37!101;UBERON:0003081!9.31e-20!216;UBERON:0002204!4.39e-19!167;UBERON:0002384!8.28e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.52e-69,76;UBERON:0001474,7.85e-64,82;UBERON:0002390,9.03e-58,98;UBERON:0003061,9.03e-58,98;UBERON:0004765,2.20e-57,90;UBERON:0002405,3.00e-55,93;UBERON:0002193,1.42e-51,108;UBERON:0001434,9.24e-51,100;UBERON:0002204,1.00e-26,167;UBERON:0003081,5.32e-23,203;UBERON:0002384,1.18e-16,371;UBERON:0000926,2.04e-11,315;UBERON:0004120,2.04e-11,315;UBERON:0006603,2.04e-11,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,1.91914699048606,2.01260960310899,0,0,0,0,0,0.880801318004542,1.10799081706375,5.41470008169383,8.89744569934992,0,0,0,1.89017710413434,1.51150377475524,0.485168122375632,2.32429036905685,4.52284676824008,8.981484755958,6.90461741573161,5.89169625016932,11.3511470346521,31.7166026277689,15.4916324060118,44.6907405761328,1.50593871634084,1.36453075028923,4.04502272001152,38.8726543311046,25.6743221660875,62.015701202507,0.329851300186716,1.39624560335142,1.70489900213078,11.0279510678862,7.37600792098482,12.4564449799115,11.8086872670669,11.9941071236646,17.8094852658196,4.23779651843358,9.94349617166425,14.5572698222807,0.422510572623884,2.33864729961548,1.25795187305026,0.561643155732475,1.05123824989054,0.803627933485401,0,0.39783335439818,0,0,0,0,0,0,0,0,0,1.1384259382189,1.17447437874188,0.764546456250458,1.32171328579026,0,0,0,0.393010762749165,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0,3.31724984865235,4.4677185559258,5.80715193761348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,0.749007023947182,2.99161459204025,4.14415513436035,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,2.66818894508611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.349843349309,3.86900977278975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1294608203896,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@TET2 | |||
}} |
Revision as of 02:35, 22 January 2014
Short description: | p8@TET2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TET2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -303bp_to_ENST00000305737, NM_017628_5end |
EntrezGene: | TET2 |
HGNC: | 25941 |
UniProt: | Q6N021 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.52e-69 | 76 |
bone element | 7.85e-64 | 82 |
hematopoietic system | 9.03e-58 | 98 |
blood island | 9.03e-58 | 98 |
skeletal element | 2.20e-57 | 90 |
immune system | 3.00e-55 | 93 |
hemolymphoid system | 1.42e-51 | 108 |
skeletal system | 9.24e-51 | 100 |
musculoskeletal system | 1.00e-26 | 167 |
lateral plate mesoderm | 5.32e-23 | 203 |
connective tissue | 1.18e-16 | 371 |
mesoderm | 2.04e-11 | 315 |
mesoderm-derived structure | 2.04e-11 | 315 |
presumptive mesoderm | 2.04e-11 | 315 |