FFCP PHASE1:Hg19::chr4:23905703..23905719,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10891 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9237 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000514494_5end | |||
|description=CAGE_peak_2_at_PPARGC1A_5end | |||
|id=chr4:23905703..23905719,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.16e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.33e-07,5;CL:0002028,2.33e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.82e-09;4!UBERON:0007284;2.82e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.69e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.32e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-60!115;UBERON:0001049!3.46e-18!57;UBERON:0005068!3.46e-18!57;UBERON:0006241!3.46e-18!57;UBERON:0007135!3.46e-18!57;UBERON:0002616!5.14e-16!59;UBERON:0003075!1.20e-14!86;UBERON:0007284!1.20e-14!86;UBERON:0005743!5.41e-14!86;UBERON:0001017!6.53e-14!82;UBERON:0002346!1.42e-13!90;UBERON:0000955!2.29e-13!69;UBERON:0006238!2.29e-13!69;UBERON:0000073!8.21e-12!94;UBERON:0001016!8.21e-12!94;UBERON:0002780!1.79e-11!41;UBERON:0001890!1.79e-11!41;UBERON:0006240!1.79e-11!41;UBERON:0000062!2.21e-11!511;UBERON:0000153!2.84e-11!129;UBERON:0007811!2.84e-11!129;UBERON:0003080!4.42e-11!42;UBERON:0000477!1.97e-10!286;UBERON:0002308!2.09e-10!9;UBERON:0000125!2.09e-10!9;UBERON:0004111!2.85e-10!241;UBERON:0004121!1.04e-09!169;UBERON:0002298!1.94e-09!8;UBERON:0000481!2.41e-09!347;UBERON:0000924!3.19e-09!173;UBERON:0006601!3.19e-09!173;UBERON:0000033!4.65e-09!123;UBERON:0003076!5.43e-09!15;UBERON:0003057!5.43e-09!15;UBERON:0000025!6.24e-09!194;UBERON:0001894!4.10e-08!7;UBERON:0006222!4.10e-08!7;UBERON:0009663!5.24e-08!7;UBERON:0003103!6.21e-08!69;UBERON:0000475!9.23e-08!365;UBERON:0000483!1.45e-07!309;UBERON:0000119!2.38e-07!312;UBERON:0000467!4.58e-07!625;UBERON:0003056!5.05e-07!61;UBERON:0000480!5.16e-07!626;UBERON:0000369!5.30e-07!4;UBERON:0002435!5.30e-07!4;UBERON:0000204!5.30e-07!4;UBERON:0010082!5.30e-07!4;UBERON:0000468!7.16e-07!659;UBERON:0001893!8.55e-07!34;UBERON:0003978!8.68e-07!3;UBERON:0009751!8.68e-07!3;UBERON:0004151!8.68e-07!3;UBERON:0000946!8.68e-07!3;UBERON:0002523!8.68e-07!3;UBERON:0005983!8.68e-07!3;UBERON:0002165!8.68e-07!3;UBERON:0002062!8.68e-07!3;UBERON:0007280!8.68e-07!3;UBERON:0000922!9.79e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;3.06e-12;3!UBERON:0003978;3.18e-12;3!UBERON:0000946;3.18e-12;3!UBERON:0007100;8.21e-11;25!UBERON:0005090;2.71e-09;2!UBERON:0001630;2.71e-09;2!UBERON:0001829;4.11e-09;2!UBERON:0002133;4.28e-09;2!UBERON:0002081;7.99e-09;2!UBERON:0007023;8.91e-09;114!UBERON:0003127;9.33e-09;2!UBERON:0000341;9.33e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.93e-26,114;UBERON:0003978,2.89e-12,3;UBERON:0009751,2.89e-12,3;UBERON:0004151,2.89e-12,3;UBERON:0000946,2.89e-12,3;UBERON:0002523,2.89e-12,3;UBERON:0005983,2.89e-12,3;UBERON:0002165,2.89e-12,3;UBERON:0002062,2.89e-12,3;UBERON:0007280,2.89e-12,3;UBERON:0001041,4.10e-11,87;UBERON:0007100,6.04e-10,27;UBERON:0005090,2.77e-09,2;UBERON:0001630,2.77e-09,2;UBERON:0003103,3.52e-09,68;UBERON:0001829,4.11e-09,2;UBERON:0002133,4.45e-09,2;UBERON:0002081,8.00e-09,2;UBERON:0010227,8.00e-09,2;UBERON:0003127,9.34e-09,2;UBERON:0000341,1.01e-08,2;UBERON:0001048,7.60e-08,160;UBERON:0001004,5.13e-07,74;UBERON:0004921,5.61e-07,118 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.9026549607958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41929561685538,0,3.10992173311158,0.288239906833923,3.02981840223312,0.253991577168676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66270448179735,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,17.3650539435341,0,0.295930216910801,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.173624994933292,2.65722415744152,0.241192877250816,0,0,0.295547618953547,1.09692698576986,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,1.07841812769083,93.9015847339583,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,1.16386819786103,0,2.93774963014692,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,23.1804393055971,1.3749625440701,15.0753335161131,1.79711100449092,16.3105898291897,2.67805748930247,99.3643558078681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,1.02447419488958,0.629455057619977,0,1.25501137532991,0,4.2881719582402,3.31045985182716,0,0,0,0,0,0,0,0,5.12932817873289,2.65013777824443,0.387848869084652,0.13223260174269,4.10608410922391,0,0.106787412567695,1.10043013569766,0,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.610131324509816,0,10.8947747181114,0.887432412294818,0.310482014706917,0,0,0.303298235083296,22.2662960165075,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.321146125482298,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0.198916222116275,1.0529445968896,0,0,0,0,0,0.337687923091973,0,0,0,0,7.67560873600055,11.4128571029538,0,0,0,0.336283722218824,0.606965604236632,3.18727067891817,0,0.115233987555779,0.342976018874837,0.135939465953663,0.0657727735628491,0,0,0.941917114206168,0.314231179832004,0,0,0,0,6.2184593433691,0,0,0.347716544605159,0,0,0,0,86.9059264816961,0,0,0.423387050190929,0,0,0,0,0,0,22.0125804643884,74.3278721639228,0,0.971421986118279,0,0.198950775161368,0,0,0,1.81155412280008,0.231522474323834,0,0,0.490296643507811,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0,0.128915775947154,0,0,0,0,1.46067277649303,80.7363538791992,0.430018749454354,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0.829169439458779,0.103432995861895,23.8822059729099,2.3806443146374,0.258355639344024,2.97958628620118,0,1.2729431655633,11.1164453927021,55.9532042095191,39.6990629258926,1.0776328482334,3.15577703727776,15.3023764011166,0,0,0,0,0,0.122241444182866,0,0,6.84330898209489,0 | |||
|short_description=p2@PPARGC1A | |||
}} |
Revision as of 00:29, 22 January 2014
Short description: | p2@PPARGC1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPARGC1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000514494_5end |
EntrezGene: | PPARGC1A |
HGNC: | 9237 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.33e-07 | 5 |
basophil mast progenitor cell | 2.33e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.93e-26 | 114 |
valve | 2.89e-12 | 3 |
cardiac mesenchyme | 2.89e-12 | 3 |
cardiac chamber | 2.89e-12 | 3 |
cardial valve | 2.89e-12 | 3 |
tunica intima | 2.89e-12 | 3 |
heart layer | 2.89e-12 | 3 |
endocardium | 2.89e-12 | 3 |
endocardial cushion | 2.89e-12 | 3 |
presumptive endocardium | 2.89e-12 | 3 |
foregut | 4.10e-11 | 87 |
primary circulatory organ | 6.04e-10 | 27 |
muscle structure | 2.77e-09 | 2 |
muscle organ | 2.77e-09 | 2 |
compound organ | 3.52e-09 | 68 |
major salivary gland | 4.11e-09 | 2 |
atrioventricular valve | 4.45e-09 | 2 |
cardiac atrium | 8.00e-09 | 2 |
future cardiac atrium | 8.00e-09 | 2 |
open tracheal system trachea | 9.34e-09 | 2 |
throat | 1.01e-08 | 2 |
primordium | 7.60e-08 | 160 |
respiratory system | 5.13e-07 | 74 |
subdivision of digestive tract | 5.61e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.32e-08 | 2 |