FFCP PHASE1:Hg19::chr3:197025449..197025533,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1739 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2900 | |||
|TSSclassifier=strong | |||
|UniProt=C9JN61 | |||
|association_with_transcript=0bp_to_ENST00000419553,ENST00000471733,uc010iam.1_5end | |||
|description=CAGE_peak_1_at_DLG1_5end | |||
|id=chr3:197025449..197025533,- | |||
|ontology_enrichment_celltype=CL:0000066!5.03e-29!254;CL:0002321!1.55e-20!248;CL:0000220!3.42e-20!246;CL:0000076!1.21e-11!62;CL:0000223!1.91e-11!59;CL:0002076!1.65e-10!43;CL:0000077!2.53e-08!19;CL:0000221!7.98e-08!71;CL:0000243!4.69e-07!15;CL:0000125!4.69e-07!15;CL:0000030!4.69e-07!15;CL:0000339!4.69e-07!15;CL:0000095!6.84e-07!17;CL:0000123!6.84e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.35e-08;42!CL:0000077;2.48e-08;19!CL:0000243;5.44e-07;15!CL:0000125;5.44e-07;15!CL:0000095;8.74e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.65e-29,253;CL:0002321,3.83e-20,250;CL:0000223,5.46e-12,58;CL:0002076,3.84e-11,42;CL:0000076,3.92e-11,63;CL:0000077,2.53e-08,19;CL:0000221,1.77e-07,72;CL:0000243,4.68e-07,15;CL:0000125,4.68e-07,15;CL:0000030,4.68e-07,15;CL:0000339,4.68e-07,15;CL:0000095,6.84e-07,17;CL:0000123,6.84e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000339;5.44e-07;15 | |||
|ontology_enrichment_disease=DOID:162!8.48e-18!235;DOID:14566!8.75e-18!239;DOID:0050687!1.19e-14!143;DOID:305!6.40e-14!106;DOID:7!3.96e-08!39;DOID:1749!1.93e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.77e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.43e-18,235;DOID:14566,8.71e-18,239;DOID:0050687,1.18e-14,143;DOID:305,6.39e-14,106;DOID:7,3.96e-08,39;DOID:1749,1.92e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!8.79e-13!365;UBERON:0000119!2.36e-10!312;UBERON:0000483!3.39e-10!309;UBERON:0004121!1.28e-07!169;UBERON:0000924!2.03e-07!173;UBERON:0006601!2.03e-07!173;UBERON:0007625!2.85e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0010371;9.81e-09;31!UBERON:0007625;2.83e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.65e-10,309;UBERON:0000483,2.38e-10,306;UBERON:0007625,2.85e-07,11;UBERON:0004121,3.92e-07,171;UBERON:0000924,3.92e-07,171;UBERON:0006601,3.92e-07,171 | |||
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| |||
|short_description=p1@DLG1 | |||
}} |
Revision as of 23:37, 21 January 2014
Short description: | p1@DLG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DLG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000419553, ENST00000471733, uc010iam.1_5end |
EntrezGene: | DLG1 |
HGNC: | 2900 |
UniProt: | C9JN61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.65e-29 | 253 |
embryonic cell | 3.83e-20 | 250 |
endodermal cell | 5.46e-12 | 58 |
endo-epithelial cell | 3.84e-11 | 42 |
squamous epithelial cell | 3.92e-11 | 63 |
mesothelial cell | 2.53e-08 | 19 |
ectodermal cell | 1.77e-07 | 72 |
glial cell (sensu Vertebrata) | 4.68e-07 | 15 |
glial cell | 4.68e-07 | 15 |
glioblast | 4.68e-07 | 15 |
glioblast (sensu Vertebrata) | 4.68e-07 | 15 |
neuron associated cell | 6.84e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.84e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.65e-10 | 309 |
epithelium | 2.38e-10 | 306 |
pigment epithelium of eye | 2.85e-07 | 11 |
ectoderm-derived structure | 3.92e-07 | 171 |
ectoderm | 3.92e-07 | 171 |
presumptive ectoderm | 3.92e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.43e-18 | 235 |
disease of cellular proliferation | 8.71e-18 | 239 |
cell type cancer | 1.18e-14 | 143 |
carcinoma | 6.39e-14 | 106 |
disease of anatomical entity | 3.96e-08 | 39 |
squamous cell carcinoma | 1.92e-07 | 14 |