FFCP PHASE1:Hg19::chr3:187454281..187454300,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=604 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1001 | |||
|TSSclassifier=strong | |||
|UniProt=P41182 | |||
|association_with_transcript=0bp_to_NM_001130845,uc003frp.3,uc010hza.2_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_BCL6_5end | |||
|id=chr3:187454281..187454300,- | |||
|ontology_enrichment_celltype=CL:0002057!2.69e-58!42;CL:0000860!9.57e-54!45;CL:0000766!4.50e-45!76;CL:0002194!3.90e-42!63;CL:0000576!3.90e-42!63;CL:0000040!3.90e-42!63;CL:0000559!3.90e-42!63;CL:0002009!1.54e-40!65;CL:0000839!6.08e-37!70;CL:0000557!2.77e-36!71;CL:0000738!3.62e-27!140;CL:0000763!5.43e-27!112;CL:0000049!5.43e-27!112;CL:0002087!1.02e-25!119;CL:0000988!3.61e-20!182;CL:0002031!3.88e-20!124;CL:0000037!8.25e-20!172;CL:0000566!8.25e-20!172;CL:0002032!9.05e-18!165;CL:0000837!9.05e-18!165;CL:0000134!1.43e-11!358;CL:0002320!4.56e-11!365;CL:0000219!1.73e-10!390;CL:0000767!2.21e-08!3;CL:0000094!6.06e-08!8;CL:0000842!7.25e-08!3;CL:0000034!1.63e-07!444;CL:0000723!2.03e-07!436;CL:0000048!3.10e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.37e-94;33!CL:0002057;2.37e-94;33!CL:0000473;2.07e-66;39!CL:0000234;2.07e-66;39!CL:0000576;3.97e-55;48!CL:0000766;1.16e-36;69!CL:0000763;1.11e-16;100!CL:0002087;3.04e-15;104!CL:0002393;1.75e-10;6!CL:0002397;1.75e-10;6!CL:0000738;8.94e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.92e-104,42;CL:0002057,7.92e-104,42;CL:0000473,2.67e-90,48;CL:0000234,2.67e-90,48;CL:0002194,2.36e-71,59;CL:0000576,2.36e-71,59;CL:0000040,2.36e-71,59;CL:0000559,2.36e-71,59;CL:0002009,6.59e-69,61;CL:0000766,2.21e-67,72;CL:0000839,1.97e-63,66;CL:0000557,1.97e-62,67;CL:0000763,1.34e-43,108;CL:0000049,1.34e-43,108;CL:0002087,1.04e-34,115;CL:0000738,1.00e-33,136;CL:0002031,4.38e-33,120;CL:0002032,8.74e-28,161;CL:0000837,8.74e-28,161;CL:0000037,1.96e-26,168;CL:0000988,7.44e-25,177;CL:0000134,4.30e-12,354;CL:0002320,9.24e-12,361;CL:0000219,1.38e-10,386;CL:0000048,3.78e-09,427;CL:0000723,5.97e-09,433;CL:0000034,1.08e-08,441;CL:0002393,3.90e-07,9;CL:0002397,3.90e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-72;42!CL:0000049;1.22e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.29e-31!80;UBERON:0002390!3.24e-30!102;UBERON:0003061!3.24e-30!102;UBERON:0001474!3.08e-28!86;UBERON:0002193!1.58e-26!112;UBERON:0002405!1.23e-22!115;UBERON:0004765!1.37e-22!101;UBERON:0001434!1.37e-22!101;UBERON:0003081!3.91e-13!216;UBERON:0002204!1.33e-11!167;UBERON:0002384!2.21e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.31e-54,76;UBERON:0001474,2.47e-50,82;UBERON:0004765,1.65e-45,90;UBERON:0002405,6.55e-44,93;UBERON:0002390,1.84e-41,98;UBERON:0003061,1.84e-41,98;UBERON:0001434,1.50e-40,100;UBERON:0002193,3.10e-37,108;UBERON:0002204,1.61e-22,167;UBERON:0003081,1.05e-17,203;UBERON:0002384,2.63e-11,371;UBERON:0000926,1.04e-09,315;UBERON:0004120,1.04e-09,315;UBERON:0006603,1.04e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0.142169232487422,0,3.32397245119126,2.00544447470142,2.82114131930607,0,0,0,0.436194716338694,0,0,0.697287110717054,1.6446715520873,2.47765096716083,14.6723120084297,6.40401766322752,15.8443094025352,5.17118521104928,2.5819387343353,4.06279459783025,0.188242339542605,0,0.449446968890169,3.67300670845083,3.20929027076094,1.91801137739712,2.63881040149373,3.39088217956774,2.13112375266347,9.57690487474327,15.3194010666608,8.09668923694247,9.04495194924276,3.65038042894141,8.68755378820467,10.2917915447673,15.0993830754902,10.4432587855492,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0,0,0,0.544017803369474,0.5013797880454,1.53172788381731,1.31149052283922,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@BCL6 | |||
}} |
Revision as of 23:10, 21 January 2014
Short description: | p8@BCL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_BCL6_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_NM_001130845, uc003frp.3, uc010hza.2_5end |
EntrezGene: | BCL6 |
HGNC: | 1001 |
UniProt: | P41182 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.92e-104 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.92e-104 | 42 |
defensive cell | 2.67e-90 | 48 |
phagocyte | 2.67e-90 | 48 |
monopoietic cell | 2.36e-71 | 59 |
monocyte | 2.36e-71 | 59 |
monoblast | 2.36e-71 | 59 |
promonocyte | 2.36e-71 | 59 |
macrophage dendritic cell progenitor | 6.59e-69 | 61 |
myeloid leukocyte | 2.21e-67 | 72 |
myeloid lineage restricted progenitor cell | 1.97e-63 | 66 |
granulocyte monocyte progenitor cell | 1.97e-62 | 67 |
myeloid cell | 1.34e-43 | 108 |
common myeloid progenitor | 1.34e-43 | 108 |
nongranular leukocyte | 1.04e-34 | 115 |
leukocyte | 1.00e-33 | 136 |
hematopoietic lineage restricted progenitor cell | 4.38e-33 | 120 |
hematopoietic oligopotent progenitor cell | 8.74e-28 | 161 |
hematopoietic multipotent progenitor cell | 8.74e-28 | 161 |
hematopoietic stem cell | 1.96e-26 | 168 |
hematopoietic cell | 7.44e-25 | 177 |
mesenchymal cell | 4.30e-12 | 354 |
connective tissue cell | 9.24e-12 | 361 |
motile cell | 1.38e-10 | 386 |
multi fate stem cell | 3.78e-09 | 427 |
somatic stem cell | 5.97e-09 | 433 |
stem cell | 1.08e-08 | 441 |
intermediate monocyte | 3.90e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.90e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.31e-54 | 76 |
bone element | 2.47e-50 | 82 |
skeletal element | 1.65e-45 | 90 |
immune system | 6.55e-44 | 93 |
hematopoietic system | 1.84e-41 | 98 |
blood island | 1.84e-41 | 98 |
skeletal system | 1.50e-40 | 100 |
hemolymphoid system | 3.10e-37 | 108 |
musculoskeletal system | 1.61e-22 | 167 |
lateral plate mesoderm | 1.05e-17 | 203 |
connective tissue | 2.63e-11 | 371 |
mesoderm | 1.04e-09 | 315 |
mesoderm-derived structure | 1.04e-09 | 315 |
presumptive mesoderm | 1.04e-09 | 315 |