FFCP PHASE1:Hg19::chr3:111718044..111718047,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29114 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29868 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UI15 | |||
|association_with_transcript=8bp_to_ENST00000455401_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_11_at_TAGLN3_5end | |||
|id=chr3:111718044..111718047,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.31e-14!8;CL:0000540!3.51e-10!6;CL:0000031!3.51e-10!6;CL:0000404!3.51e-10!6;CL:0002319!4.51e-10!25;CL:0000133!5.49e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.15e-16;6!CL:0000404;1.15e-16;6!CL:0002319;9.73e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.45e-21,8;CL:0000540,1.31e-16,6;CL:0000031,1.31e-16,6;CL:0000404,1.31e-16,6;CL:0002319,1.01e-09,25;CL:0000133,9.40e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.15e-16;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.51e-74!82;UBERON:0000073!2.13e-72!94;UBERON:0001016!2.13e-72!94;UBERON:0005743!8.80e-70!86;UBERON:0001049!7.23e-69!57;UBERON:0005068!7.23e-69!57;UBERON:0006241!7.23e-69!57;UBERON:0007135!7.23e-69!57;UBERON:0002616!1.84e-59!59;UBERON:0000955!6.52e-57!69;UBERON:0006238!6.52e-57!69;UBERON:0002780!3.46e-50!41;UBERON:0001890!3.46e-50!41;UBERON:0006240!3.46e-50!41;UBERON:0003080!8.61e-49!42;UBERON:0001893!7.33e-47!34;UBERON:0002020!8.34e-47!34;UBERON:0003528!8.34e-47!34;UBERON:0001869!1.40e-46!32;UBERON:0003075!5.73e-46!86;UBERON:0007284!5.73e-46!86;UBERON:0002791!1.04e-44!33;UBERON:0002346!2.33e-43!90;UBERON:0002619!1.00e-41!22;UBERON:0004121!8.21e-40!169;UBERON:0000956!1.33e-39!25;UBERON:0000203!1.33e-39!25;UBERON:0000924!1.59e-38!173;UBERON:0006601!1.59e-38!173;UBERON:0001950!8.56e-38!20;UBERON:0003056!6.40e-33!61;UBERON:0000033!3.60e-31!123;UBERON:0000153!4.00e-29!129;UBERON:0007811!4.00e-29!129;UBERON:0007023!1.50e-26!115;UBERON:0003076!2.22e-20!15;UBERON:0003057!2.22e-20!15;UBERON:0000025!7.61e-19!194;UBERON:0004733!6.86e-18!12;UBERON:0002028!6.86e-18!12;UBERON:0007277!6.86e-18!12;UBERON:0004732!2.44e-16!13;UBERON:0001871!2.18e-14!7;UBERON:0000200!2.25e-14!6;UBERON:0004111!1.36e-12!241;UBERON:0002680!2.99e-12!9;UBERON:0001895!2.99e-12!9;UBERON:0010092!2.99e-12!9;UBERON:0000349!4.69e-12!5;UBERON:0001872!5.65e-12!5;UBERON:0000483!1.34e-10!309;UBERON:0000119!2.30e-10!312;UBERON:0000064!3.00e-10!219;UBERON:0002298!3.53e-10!8;UBERON:0000369!5.88e-10!4;UBERON:0002435!5.88e-10!4;UBERON:0000204!5.88e-10!4;UBERON:0010082!5.88e-10!4;UBERON:0000475!1.26e-09!365;UBERON:0000477!2.83e-09!286;UBERON:0002420!2.95e-09!9;UBERON:0007245!2.95e-09!9;UBERON:0010009!2.95e-09!9;UBERON:0010011!2.95e-09!9;UBERON:0000454!2.95e-09!9;UBERON:0002308!4.76e-09!9;UBERON:0000125!4.76e-09!9;UBERON:0002021!2.13e-08!5;UBERON:0000988!5.41e-08!3;UBERON:0005383!8.67e-08!3;UBERON:0005382!8.67e-08!3;UBERON:0002771!1.48e-07!3;UBERON:0001896!1.62e-07!3;UBERON:0005290!1.62e-07!3;UBERON:0010096!1.62e-07!3;UBERON:0000922!3.71e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.03e-23;20!UBERON:0002619;1.33e-21;22!UBERON:0002021;1.16e-19;5!UBERON:0000956;4.82e-19;25!UBERON:0000203;4.82e-19;25!UBERON:0002791;2.23e-14;32!UBERON:0001869;2.23e-14;32!UBERON:0001871;5.55e-14;6!UBERON:0001893;1.68e-12;34!UBERON:0003528;4.31e-12;34!UBERON:0002020;4.31e-12;34!UBERON:0002902;1.19e-11;1!UBERON:0009899;1.19e-11;1!UBERON:0000955;5.05e-09;68!UBERON:0000073;1.08e-08;53!UBERON:0002616;1.08e-08;53!UBERON:0001016;1.28e-08;83!UBERON:0001017;1.95e-08;75!UBERON:0002780;5.16e-08;41!UBERON:0001890;5.16e-08;41!UBERON:0000200;8.41e-08;6!UBERON:0000922;7.76e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.42e-27,89;UBERON:0001017,2.29e-26,81;UBERON:0001950,9.46e-24,20;UBERON:0002619,1.23e-21,22;UBERON:0002021,1.59e-19,5;UBERON:0000956,4.50e-19,25;UBERON:0000203,4.50e-19,25;UBERON:0001049,5.64e-17,56;UBERON:0005068,5.64e-17,56;UBERON:0006241,5.64e-17,56;UBERON:0007135,5.64e-17,56;UBERON:0004121,4.12e-15,171;UBERON:0000924,4.12e-15,171;UBERON:0006601,4.12e-15,171;UBERON:0002791,6.73e-15,32;UBERON:0001869,6.73e-15,32;UBERON:0000073,1.50e-14,53;UBERON:0002616,1.50e-14,53;UBERON:0001871,4.75e-14,6;UBERON:0003528,5.19e-14,34;UBERON:0002020,5.19e-14,34;UBERON:0001893,5.19e-14,34;UBERON:0000955,1.22e-13,68;UBERON:0006238,1.22e-13,68;UBERON:0002780,1.44e-11,41;UBERON:0001890,1.44e-11,41;UBERON:0003080,1.44e-11,41;UBERON:0006240,1.44e-11,41;UBERON:0002902,1.63e-11,1;UBERON:0009899,1.63e-11,1;UBERON:0003075,3.13e-11,82;UBERON:0007284,3.13e-11,82;UBERON:0011216,4.81e-11,223;UBERON:0002346,1.19e-10,86;UBERON:0010371,1.85e-10,104;UBERON:0000200,6.84e-08,6;UBERON:0003056,1.29e-07,61;UBERON:0003076,7.65e-07,15;UBERON:0003057,7.65e-07,15 | |||
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|short_description=p11@TAGLN3 | |||
}} |
Revision as of 20:29, 21 January 2014
Short description: | p11@TAGLN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TAGLN3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 8bp_to_ENST00000455401_5end |
EntrezGene: | TAGLN3 |
HGNC: | 29868 |
UniProt: | Q9UI15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.45e-21 | 8 |
neuron | 1.31e-16 | 6 |
neuroblast | 1.31e-16 | 6 |
electrically signaling cell | 1.31e-16 | 6 |
neural cell | 1.01e-09 | 25 |
neurectodermal cell | 9.40e-08 | 59 |