FFCP PHASE1:Hg19::chr3:100211600..100211628,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55076 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25480 | |||
|TSSclassifier=strong | |||
|UniProt=C9J9Z5 | |||
|association_with_transcript=96bp_to_ENST00000449609_5end | |||
|coexpression_cluster_id=C4255 | |||
|description=CAGE_peak_4_at_TMEM45A_5end | |||
|id=chr3:100211600..100211628,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.84e-19!180;CL:0000680!2.55e-12!57;CL:0000056!2.55e-12!57;CL:0000355!2.55e-12!57;CL:0000192!1.09e-11!42;CL:0000514!1.09e-11!42;CL:0000187!3.55e-11!54;CL:0000057!1.68e-10!75;CL:0000183!2.89e-10!59;CL:0000359!3.05e-10!32;CL:0000393!5.93e-10!60;CL:0000211!5.93e-10!60 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.75e-12;55!CL:0000048;7.28e-11;58!CL:0000723;1.04e-10;61!CL:0000359;1.28e-10;32!CL:0000192;3.25e-09;43!CL:0000034;3.71e-08;69!CL:0000349;6.09e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.95e-12,43;CL:0000514,3.95e-12,43;CL:0000680,1.49e-11,58;CL:0000056,1.49e-11,58;CL:0000355,1.49e-11,58;CL:0000359,5.63e-11,32;CL:0000048,2.39e-10,427;CL:0000723,2.59e-10,433;CL:0000187,3.65e-10,55;CL:0000034,4.62e-10,441;CL:0000057,1.28e-09,76;CL:0000393,4.12e-08,61;CL:0000211,4.12e-08,61;CL:0000349,8.82e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;3.25e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!1.75e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.62e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.61e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.38e-13!83;UBERON:0002329!2.38e-13!83;UBERON:0003077!2.38e-13!83;UBERON:0003059!2.38e-13!83;UBERON:0007282!2.38e-13!83;UBERON:0009618!2.38e-13!83;UBERON:0007285!2.38e-13!83;UBERON:0004290!2.18e-12!70;UBERON:0002100!1.31e-11!216;UBERON:0005256!1.95e-11!143;UBERON:0001134!2.29e-11!61;UBERON:0002036!2.29e-11!61;UBERON:0003082!2.29e-11!61;UBERON:0002385!3.04e-11!63;UBERON:0001015!3.04e-11!63;UBERON:0000383!3.04e-11!63;UBERON:0000486!1.30e-10!82;UBERON:0003104!1.05e-09!238;UBERON:0009142!1.05e-09!238;UBERON:0004872!1.20e-09!84;UBERON:0001637!4.31e-09!42;UBERON:0003509!4.31e-09!42;UBERON:0004572!4.31e-09!42;UBERON:0004573!2.55e-08!33;UBERON:0004571!2.55e-08!33;UBERON:0003102!2.93e-08!95;UBERON:0002199!4.95e-08!45;UBERON:0002416!4.95e-08!45;UBERON:0000475!5.87e-08!365;UBERON:0005631!1.31e-07!14;UBERON:0000158!1.31e-07!14;UBERON:0000468!4.96e-07!659;UBERON:0002097!7.35e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.96e-08;9!UBERON:0001557;1.96e-08;9!UBERON:0004573;2.08e-08;33!UBERON:0004571;2.08e-08;33!UBERON:0005631;7.54e-08;10!UBERON:0000158;7.54e-08;10!UBERON:0001637;3.63e-07;42!UBERON:0003509;3.63e-07;42!UBERON:0004572;3.63e-07;42!UBERON:0001013;6.73e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,9.42e-11,42;UBERON:0003509,9.42e-11,42;UBERON:0004572,9.42e-11,42;UBERON:0005256,4.37e-10,122;UBERON:0001134,5.01e-10,62;UBERON:0002036,5.01e-10,62;UBERON:0003082,5.01e-10,62;UBERON:0005631,6.72e-10,14;UBERON:0000158,6.72e-10,14;UBERON:0007524,1.34e-09,73;UBERON:0002329,1.58e-09,71;UBERON:0003059,1.58e-09,71;UBERON:0007282,1.58e-09,71;UBERON:0004290,1.58e-09,71;UBERON:0009618,1.58e-09,71;UBERON:0004872,1.67e-09,83;UBERON:0004573,1.82e-09,33;UBERON:0004571,1.82e-09,33;UBERON:0002385,2.39e-09,64;UBERON:0001015,2.39e-09,64;UBERON:0000383,2.39e-09,64;UBERON:0003077,3.18e-09,72;UBERON:0007285,3.18e-09,72;UBERON:0001737,1.80e-08,9;UBERON:0000486,6.78e-08,83;UBERON:0007503,1.33e-07,78;UBERON:0003104,5.19e-07,160;UBERON:0009142,5.19e-07,160;UBERON:0002199,6.11e-07,46;UBERON:0002416,6.11e-07,46 | |||
|phase1_expression=12.1724514111273,16.0575392918237,17.3373917038045,11.0080628188443,17.4314826826642,64.5530507834273,2.53299878168311,8.2123583545488,2.87304191019822,4.42321085702716,0,3.05817920982241,1.31883489114227,0.123766352960047,0.662794751455832,2.01697543935533,1.20538905604795,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0.125542639594803,0,0,0.157421562627358,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,16.877858163346,0.361439152384566,5.51471701699479,3.0417768981773,19.0868627292264,47.2035824193557,0.283604451492204,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0.436094052142534,11.4303548889923,3.29239330327907,6.3556406790345,5.73673241497627,1.06400514659507,7.8494864019923,5.33744978648525,2.4666754841716,1.8672662123986,0.404132016209064,0.326923806226917,1.81628913173918,0.576175924479999,0,1.24864030732128,0.570471821544449,0.597794722207204,0.352303495931295,0.485618833104395,0.702254033511242,1.63323337003915,0.245668634623536,1.13658359293342,2.37600571456411,1.48360157567134,0,0,1.17835279767846,0.125118519871964,1.10825646193673,0.438977620880838,0.612975591598039,0.901428353439581,3.62982986112067,2.33206526395521,7.26095121983129,16.3187563892863,1.20036438433761,3.09157587715317,2.31876486041066,4.46680455195816,2.19409231913646,3.99491721160914,1.7670364197088,6.07529331039176,1.13152239773168,3.19508633264953,1.20902517873168,5.59549954624609,0.386521706326594,0.818238361772504,0,0,0,1.85910308591229,1.65857688024593,0.756962552626885,0,3.12899064659632,1.28648187638577,1.38134921352481,2.78620756819187,2.88751792667834,7.09840800239063,7.24914167335837,4.57920956778616,7.49999014580279,6.53638332277218,10.4399072408883,5.52808363456674,4.51309369788296,8.46443745282059,0,1.40241773803446,1.2347220339942,0,7.60530208930985,8.84544495009863,7.08947888017685,0,0,3.43135620597051,0.878002283269004,1.1240175325762,0.201057944823262,0.0925884451585296,0,1.03993478527958,0,0.115930404975077,0.587043471179108,0.721832238805369,0.462985512576611,0.190254152234598,0,0,0,0,0,0.93733833986777,1.51183915378974,0.850650583454319,0.626909658919938,0.581267877027924,0.383382679165211,0,0.264145302039678,0,0,0.25248486685276,0.253991577168676,0,0,0,0.102827492703324,0,0,0.112131084345361,1.30788020649984,1.24675085895615,0.775630294546667,3.57656445851882,0.845302752556,1.32969058292435,1.04007436911366,1.28603687131071,0,0.799266537048298,23.1624349726199,1.08524321078289,0.823240336780769,1.30294473717494,18.8357732833549,0,3.31583314765545,0,0.199945982364114,0,0.502257091432126,0,3.11512312139057,0,0,6.80472141337622,1.43833425785268,5.19276793395697,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,1.10422342547226,1.00034104211935,1.08506009479894,2.9115920614313,1.24900292158013,1.10391690523754,1.99140405487612,4.51419149591578,0,0,1.99267679560631,2.76553752812555,0.955719759148911,0.783204629850962,0.686286847621712,0,0,0,1.5156378572313,4.99306318531491,3.93107381328584,6.4508030032882,9.97502826372406,4.49056151092918,15.7611153584512,2.04682899626681,8.20354997832398,32.651974617898,0.154209693802656,1.59805552781814,0.164254312027618,2.07701771673448,0.116210378459959,0,8.02025881213139,0.184161977871793,2.75554675595056,0.910455840033585,1.31124414959424,0,0.539107359730903,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0,0,1.95777922130672,1.09883357782012,0.82509499920588,1.14853107599234,0.650060246036521,30.5299466703903,0.096670718292122,0.462145851343933,1.38153307253517,0.689182862422653,1.39646318328756,0.725083469571143,0.255679882248303,0.0890320356467374,3.47098322258054,1.72971060628596,1.53135254993501,1.71968227454435,11.6211387324321,51.629224880225,1.3940745403212,8.93297382510658,1.06461206063404,1.73986598415015,6.67167188774112,10.5912416189074,1.116475108079,0,0.38126038784765,0.767693373934002,0,5.72765846266686,16.4839214441838,1.43897966066652,3.0199073270966,1.41374882814824,3.03273722359974,4.75530963519025,0.842516912477962,1.46290121726877,7.7988316682011,13.7345190783782,1.50149902548784,1.55545975149084,4.52032466480971,9.37321084028411,8.62470667813585,6.13831239355268,0,1.31178950409327,3.44947640836597,1.54911749049875,2.53526042279017,0.286822704408103,0.589494246078727,2.85336841185,3.19284957663538,1.05553817648832,1.31717957183961,0.379473173765715,0,0.192444225451024,0.670302275535787,0,2.91845782408015,4.3050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,1.62310970137278,0,0,0,0,0,0,0,0,2.40453741329035,0,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0.852408440419239,8.35605696581915,8.61197574414652,13.20791019026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| |||
|short_description=p4@TMEM45A | |||
}} |
Revision as of 20:11, 21 January 2014
Short description: | p4@TMEM45A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMEM45A_5end |
Coexpression cluster: | C4255_Adipocyte_amniotic_Smooth_Chondrocyte_chorionic_Ewing_Preadipocyte |
Association with transcript: | 96bp_to_ENST00000449609_5end |
EntrezGene: | TMEM45A |
HGNC: | 25480 |
UniProt: | C9J9Z5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.95e-12 | 43 |
smooth muscle myoblast | 3.95e-12 | 43 |
muscle precursor cell | 1.49e-11 | 58 |
myoblast | 1.49e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.49e-11 | 58 |
vascular associated smooth muscle cell | 5.63e-11 | 32 |
multi fate stem cell | 2.39e-10 | 427 |
somatic stem cell | 2.59e-10 | 433 |
muscle cell | 3.65e-10 | 55 |
stem cell | 4.62e-10 | 441 |
fibroblast | 1.28e-09 | 76 |
electrically responsive cell | 4.12e-08 | 61 |
electrically active cell | 4.12e-08 | 61 |
extraembryonic cell | 8.82e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
artery | 9.42e-11 | 42 |
arterial blood vessel | 9.42e-11 | 42 |
arterial system | 9.42e-11 | 42 |
trunk mesenchyme | 4.37e-10 | 122 |
skeletal muscle tissue | 5.01e-10 | 62 |
striated muscle tissue | 5.01e-10 | 62 |
myotome | 5.01e-10 | 62 |
extraembryonic membrane | 6.72e-10 | 14 |
membranous layer | 6.72e-10 | 14 |
dense mesenchyme tissue | 1.34e-09 | 73 |
somite | 1.58e-09 | 71 |
presomitic mesoderm | 1.58e-09 | 71 |
presumptive segmental plate | 1.58e-09 | 71 |
dermomyotome | 1.58e-09 | 71 |
trunk paraxial mesoderm | 1.58e-09 | 71 |
splanchnic layer of lateral plate mesoderm | 1.67e-09 | 83 |
systemic artery | 1.82e-09 | 33 |
systemic arterial system | 1.82e-09 | 33 |
muscle tissue | 2.39e-09 | 64 |
musculature | 2.39e-09 | 64 |
musculature of body | 2.39e-09 | 64 |
paraxial mesoderm | 3.18e-09 | 72 |
presumptive paraxial mesoderm | 3.18e-09 | 72 |
larynx | 1.80e-08 | 9 |
multilaminar epithelium | 6.78e-08 | 83 |
epithelial vesicle | 1.33e-07 | 78 |
mesenchyme | 5.19e-07 | 160 |
entire embryonic mesenchyme | 5.19e-07 | 160 |
integument | 6.11e-07 | 46 |
integumental system | 6.11e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.61e-11 | 14 |