FFCP PHASE1:Hg19::chr3:69435428..69435443,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23150 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24886 | |||
|TSSclassifier=strong | |||
|UniProt=F5H6F3,B3KNA2,Q2TB00,Q9Y2L6,Q6PEW6 | |||
|association_with_transcript=0bp_to_ENST00000542259,NM_015123,uc003dnv.2,uc003dny.2_5end | |||
|coexpression_cluster_id=C2751 | |||
|description=CAGE_peak_19_at_FRMD4B_5end | |||
|id=chr3:69435428..69435443,- | |||
|ontology_enrichment_celltype=CL:0002274!1.27e-08!5;CL:0000457!1.27e-08!5;CL:0002191!1.27e-08!5;CL:0000097!1.27e-08!5;CL:0000831!1.27e-08!5;CL:0002028!1.27e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;8.72e-15;5!CL:0002619;1.65e-11;3!CL:0000784;6.32e-11;3!CL:0002032;2.31e-09;1!CL:0000557;2.31e-09;1!CL:0000037;8.16e-09;1!CL:0001024;8.16e-09;1!CL:0000163;1.94e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.14e-15,5;CL:0002028,9.14e-15,5;CL:0002619,1.66e-11,3;CL:0000784,5.43e-11,3;CL:0001024,7.27e-09,1;CL:0000163,1.99e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0010115;3.72e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.46e-16!115;UBERON:0002405!1.28e-08!115;UBERON:0002193!5.02e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.28e-24;5!UBERON:0005057;1.28e-24;5!UBERON:0002370;1.37e-16;2!UBERON:0005058;1.37e-16;2!UBERON:0009113;1.37e-16;2!UBERON:0002106;6.32e-11;3!UBERON:0002405;9.46e-10;27!UBERON:0002363;3.72e-09;1!UBERON:0002426;8.16e-09;1!UBERON:0003831;8.16e-09;1!UBERON:0003898;8.16e-09;1!UBERON:0004830;8.16e-09;1!UBERON:0003830;8.16e-09;1!UBERON:0005175;8.16e-09;1!UBERON:0001774;8.16e-09;1!UBERON:0001103;8.16e-09;1!UBERON:0002390;2.53e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.43e-17,7;UBERON:0005057,1.43e-17,7;UBERON:0002405,1.50e-11,93;UBERON:0002106,6.32e-11,3;UBERON:0004854,6.32e-11,3;UBERON:0009034,6.32e-11,3;UBERON:0002095,6.32e-11,3;UBERON:0004782,6.32e-11,3;UBERON:0003281,6.32e-11,3;UBERON:0009664,6.32e-11,3;UBERON:0002296,6.32e-11,3;UBERON:0005602,6.32e-11,3;UBERON:0001179,6.32e-11,3;UBERON:0006293,6.32e-11,3;UBERON:0002390,7.53e-11,98;UBERON:0003061,7.53e-11,98;UBERON:0002193,1.22e-09,108;UBERON:0002363,2.60e-09,1;UBERON:0007645,2.60e-09,1;UBERON:0007647,2.60e-09,1;UBERON:0010115,2.60e-09,1;UBERON:0002426,6.72e-09,1;UBERON:0003831,6.72e-09,1;UBERON:0003898,6.72e-09,1;UBERON:0004830,6.72e-09,1;UBERON:0003830,6.72e-09,1;UBERON:0005175,6.72e-09,1;UBERON:0001774,6.72e-09,1;UBERON:0001103,6.72e-09,1;UBERON:0010084,6.72e-09,1;UBERON:0002370,1.16e-08,4;UBERON:0005058,1.16e-08,4;UBERON:0009113,1.16e-08,4;UBERON:0003295,1.16e-08,4;UBERON:0005562,1.16e-08,4;UBERON:0002371,7.30e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46800219667424,0,0,0.434021741431704,2.23915474239924,0.647787332037959,3.34848237924443,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28685314316103,0.560508562981536,0.526768169550154,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511946444617674,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0.476981248610684,1.14398982156026,1.85728750664782,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,2.36315962672562,8.38779888887836,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.738651018262192,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0.264145302039678,2.28060927094849,2.01767934783746,4.03975786964416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,2.43247561282381,2.00902836572851,0,0,0,0,0,0,0.358121926479791,0,0.197030760201927,1.07813787429759,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.721287081534056,0,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0.142283686696828,0.318852545457645,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.597743964753209,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0.134802265961354,1.60515529459758,0,0,0,0,0,1.20990716048664,0,2.59064976476801,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,3.83239764200917,0.429765441419957,0,0.837847203816763,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0.0607495566580247,0,0.630445658393585,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0.992332043623902,0,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3560912801805,0,0,0,0.256916900385838,0,0.319267718114302,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0.992422356778588,0,0,0,0,0,0.227662191351298,0.532214220975833,0.576169937778896,0,0.0679697329768317,0,0,0,0.313972371402056,0,0,0,0,0,0.643288897589907,0,0.23248285073625,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0.233939463462106,0,0,0,0.439762066981716,0,0.0771741581079447,0.437119121007915,0,0.490296643507811,0,0,0,0,0,1.03382309777839,1.67590508731301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0.20686599172379,0.639701945702943,0.23806443146374,2.00225620491619,2.23468971465088,0,0.12729431655633,0.404234377916439,0.217716747896961,0,0.134704106029175,0.358611026963382,0.99798106963804,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p19@FRMD4B | |||
}} |
Revision as of 19:42, 21 January 2014
Short description: | p19@FRMD4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_FRMD4B_5end |
Coexpression cluster: | C2751_non_Hodgkin_Mast_CD14_CD34_granulocyte_dura |
Association with transcript: | 0bp_to_ENST00000542259, NM_015123, uc003dnv.2, uc003dny.2_5end |
EntrezGene: | FRMD4B |
HGNC: | 24886 |
UniProt: | F5H6F3B3KNA2Q2TB00Q9Y2L6Q6PEW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.14e-15 | 5 |
basophil mast progenitor cell | 9.14e-15 | 5 |
adult endothelial progenitor cell | 1.66e-11 | 3 |
plasmacytoid dendritic cell | 5.43e-11 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 7.27e-09 | 1 |
endocrine cell | 1.99e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.43e-17 | 7 |
immune organ | 1.43e-17 | 7 |
immune system | 1.50e-11 | 93 |
spleen | 6.32e-11 | 3 |
gastrointestinal system mesentery | 6.32e-11 | 3 |
stomach region | 6.32e-11 | 3 |
mesentery | 6.32e-11 | 3 |
gastrointestinal system serosa | 6.32e-11 | 3 |
mesentery of stomach | 6.32e-11 | 3 |
gut mesentery | 6.32e-11 | 3 |
dorsal mesentery | 6.32e-11 | 3 |
dorsal mesogastrium | 6.32e-11 | 3 |
peritoneal cavity | 6.32e-11 | 3 |
spleen primordium | 6.32e-11 | 3 |
hematopoietic system | 7.53e-11 | 98 |
blood island | 7.53e-11 | 98 |
hemolymphoid system | 1.22e-09 | 108 |
dura mater | 2.60e-09 | 1 |
future meninx | 2.60e-09 | 1 |
ectomeninx | 2.60e-09 | 1 |
future dura mater | 2.60e-09 | 1 |
chest muscle | 6.72e-09 | 1 |
respiratory system muscle | 6.72e-09 | 1 |
skeletal muscle of trunk | 6.72e-09 | 1 |
respiratory system skeletal muscle | 6.72e-09 | 1 |
thoracic segment muscle | 6.72e-09 | 1 |
chest organ | 6.72e-09 | 1 |
muscle of trunk | 6.72e-09 | 1 |
diaphragm | 6.72e-09 | 1 |
future diaphragm | 6.72e-09 | 1 |
thymus | 1.16e-08 | 4 |
hemolymphoid system gland | 1.16e-08 | 4 |
thymic region | 1.16e-08 | 4 |
pharyngeal gland | 1.16e-08 | 4 |
thymus primordium | 1.16e-08 | 4 |
bone marrow | 7.30e-07 | 76 |