FFCP PHASE1:Hg19::chr3:15373291..15373309,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9467 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10827 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=260bp_to_ENST00000459627_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_SH3BP5_5end | |||
|id=chr3:15373291..15373309,- | |||
|ontology_enrichment_celltype=CL:0002057!1.40e-45!42;CL:0000860!7.15e-44!45;CL:0002009!2.12e-41!65;CL:0000766!8.91e-41!76;CL:0002194!1.31e-38!63;CL:0000576!1.31e-38!63;CL:0000040!1.31e-38!63;CL:0000559!1.31e-38!63;CL:0000557!1.22e-36!71;CL:0000738!1.39e-36!140;CL:0002087!1.56e-33!119;CL:0000839!2.50e-33!70;CL:0002031!1.54e-31!124;CL:0000037!6.93e-26!172;CL:0000566!6.93e-26!172;CL:0002032!1.59e-25!165;CL:0000837!1.59e-25!165;CL:0000763!2.91e-25!112;CL:0000049!2.91e-25!112;CL:0000988!2.86e-24!182;CL:0000094!2.82e-07!8;CL:0000134!5.30e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.94e-76;33!CL:0002057;3.94e-76;33!CL:0000473;8.77e-60;39!CL:0000234;8.77e-60;39!CL:0000576;1.88e-41;48!CL:0000766;3.49e-29;69!CL:0002087;4.43e-12;104!CL:0000763;1.03e-11;100!CL:0000738;3.70e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.86e-71,42;CL:0002057,1.86e-71,42;CL:0000473,4.05e-69,48;CL:0000234,4.05e-69,48;CL:0002009,1.94e-58,61;CL:0002194,1.03e-54,59;CL:0000576,1.03e-54,59;CL:0000040,1.03e-54,59;CL:0000559,1.03e-54,59;CL:0000557,5.11e-53,67;CL:0000766,2.79e-49,72;CL:0000839,1.09e-48,66;CL:0000763,2.49e-35,108;CL:0000049,2.49e-35,108;CL:0002031,1.77e-31,120;CL:0000738,2.76e-30,136;CL:0002087,7.79e-30,115;CL:0002032,4.08e-25,161;CL:0000837,4.08e-25,161;CL:0000037,6.09e-24,168;CL:0000988,1.45e-22,177;CL:0000134,1.30e-09,354;CL:0002320,2.34e-09,361;CL:0000219,1.85e-08,386;CL:0000048,2.34e-07,427;CL:0000723,3.32e-07,433;CL:0000034,5.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-54;42!CL:0000049;1.25e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.61e-32!80;UBERON:0002193!5.10e-30!112;UBERON:0001474!3.33e-29!86;UBERON:0002390!1.81e-27!102;UBERON:0003061!1.81e-27!102;UBERON:0002405!4.80e-26!115;UBERON:0004765!7.04e-24!101;UBERON:0001434!7.04e-24!101;UBERON:0003081!4.25e-12!216;UBERON:0002204!4.89e-11!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.81e-46,76;UBERON:0001474,6.87e-43,82;UBERON:0004765,7.53e-39,90;UBERON:0002405,1.64e-37,93;UBERON:0002390,1.84e-35,98;UBERON:0003061,1.84e-35,98;UBERON:0001434,1.07e-34,100;UBERON:0002193,6.37e-32,108;UBERON:0002204,1.37e-19,167;UBERON:0003081,1.49e-15,203;UBERON:0002384,5.20e-09,371;UBERON:0000926,7.79e-09,315;UBERON:0004120,7.79e-09,315;UBERON:0006603,7.79e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0.786728553697808,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.601633342410425,1.95309783644267,0,0,0,0.436194716338694,0,0.485168122375632,0.464858073811369,1.6446715520873,3.71647645074124,1.43846196161075,3.33008918487831,4.96612682766029,1.72372840368309,6.45484683583826,4.06279459783025,1.31769637679823,1.63743690034707,2.47195832889593,0.918251677112708,2.56743221660875,1.27867425159808,0.329851300186716,0.398927315243264,0,0.870627715885752,1.13477044938228,1.24564449799115,4.52247597462138,3.12889751052121,5.42972111762792,0,0.736555271975129,0.949387162322653,0.211255286311942,0,0.209658645508376,0.336985893439485,0.150176892841506,0.16072558669708,0.285012743741249,0,0,1.75996244461323,0.546138611262131,0,0,0.400395987036012,0.574752439954483,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0.366403487860815,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0.858486162094873,0,0.936017060556951,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,2.43247561282381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,0.77380195455795,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0.213574825135389,0,0,0,0,0.243585196761792,0,0,0,0.306345576763462,0.327872630709804,0,0,0.122026264901963,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0.378806010550178,0,0,0.457680136793847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.19024743058172,0,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p3@SH3BP5 | |||
}} |
Revision as of 17:37, 21 January 2014
Short description: | p3@SH3BP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SH3BP5_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 260bp_to_ENST00000459627_5end |
EntrezGene: | SH3BP5 |
HGNC: | 10827 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.86e-71 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.86e-71 | 42 |
defensive cell | 4.05e-69 | 48 |
phagocyte | 4.05e-69 | 48 |
macrophage dendritic cell progenitor | 1.94e-58 | 61 |
monopoietic cell | 1.03e-54 | 59 |
monocyte | 1.03e-54 | 59 |
monoblast | 1.03e-54 | 59 |
promonocyte | 1.03e-54 | 59 |
granulocyte monocyte progenitor cell | 5.11e-53 | 67 |
myeloid leukocyte | 2.79e-49 | 72 |
myeloid lineage restricted progenitor cell | 1.09e-48 | 66 |
myeloid cell | 2.49e-35 | 108 |
common myeloid progenitor | 2.49e-35 | 108 |
hematopoietic lineage restricted progenitor cell | 1.77e-31 | 120 |
leukocyte | 2.76e-30 | 136 |
nongranular leukocyte | 7.79e-30 | 115 |
hematopoietic oligopotent progenitor cell | 4.08e-25 | 161 |
hematopoietic multipotent progenitor cell | 4.08e-25 | 161 |
hematopoietic stem cell | 6.09e-24 | 168 |
hematopoietic cell | 1.45e-22 | 177 |
mesenchymal cell | 1.30e-09 | 354 |
connective tissue cell | 2.34e-09 | 361 |
motile cell | 1.85e-08 | 386 |
multi fate stem cell | 2.34e-07 | 427 |
somatic stem cell | 3.32e-07 | 433 |
stem cell | 5.23e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.81e-46 | 76 |
bone element | 6.87e-43 | 82 |
skeletal element | 7.53e-39 | 90 |
immune system | 1.64e-37 | 93 |
hematopoietic system | 1.84e-35 | 98 |
blood island | 1.84e-35 | 98 |
skeletal system | 1.07e-34 | 100 |
hemolymphoid system | 6.37e-32 | 108 |
musculoskeletal system | 1.37e-19 | 167 |
lateral plate mesoderm | 1.49e-15 | 203 |
connective tissue | 5.20e-09 | 371 |
mesoderm | 7.79e-09 | 315 |
mesoderm-derived structure | 7.79e-09 | 315 |
presumptive mesoderm | 7.79e-09 | 315 |