FFCP PHASE1:Hg19::chr22:37213052..37213086,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5816 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9704 | |||
|TSSclassifier=strong | |||
|UniProt=P20472 | |||
|association_with_transcript=0bp_to_ENST00000417718,ENST00000467935,uc010gwz.2_5end | |||
|description=CAGE_peak_1_at_PVALB_5end | |||
|id=chr22:37213052..37213086,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;7.82e-10;5!CL:0000235;4.59e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,8.43e-10,5;CL:0002028,8.43e-10,5;CL:0000235,4.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.32e-16;82!UBERON:0006215;1.19e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.10e-66!115;UBERON:0001049!9.24e-36!57;UBERON:0005068!9.24e-36!57;UBERON:0006241!9.24e-36!57;UBERON:0007135!9.24e-36!57;UBERON:0001017!2.71e-30!82;UBERON:0005743!1.74e-29!86;UBERON:0000955!1.01e-28!69;UBERON:0006238!1.01e-28!69;UBERON:0002616!1.28e-28!59;UBERON:0002780!8.70e-27!41;UBERON:0001890!8.70e-27!41;UBERON:0006240!8.70e-27!41;UBERON:0000073!5.37e-26!94;UBERON:0001016!5.37e-26!94;UBERON:0003080!7.66e-26!42;UBERON:0003075!4.41e-25!86;UBERON:0007284!4.41e-25!86;UBERON:0002346!5.31e-25!90;UBERON:0001893!2.74e-24!34;UBERON:0002020!2.92e-24!34;UBERON:0003528!2.92e-24!34;UBERON:0002791!3.57e-23!33;UBERON:0001869!1.73e-22!32;UBERON:0002619!2.02e-21!22;UBERON:0001950!1.05e-19!20;UBERON:0000956!5.77e-18!25;UBERON:0000203!5.77e-18!25;UBERON:0003056!8.64e-18!61;UBERON:0000153!6.30e-17!129;UBERON:0007811!6.30e-17!129;UBERON:0000033!1.17e-15!123;UBERON:0000924!1.02e-12!173;UBERON:0006601!1.02e-12!173;UBERON:0004121!1.82e-12!169;UBERON:0000178!1.42e-11!15;UBERON:0000179!1.42e-11!15;UBERON:0000463!1.42e-11!15;UBERON:0003076!6.47e-11!15;UBERON:0003057!6.47e-11!15;UBERON:0004732!5.52e-09!13;UBERON:0000200!3.08e-08!6;UBERON:0004733!3.90e-08!12;UBERON:0002028!3.90e-08!12;UBERON:0007277!3.90e-08!12;UBERON:0002308!9.67e-08!9;UBERON:0000125!9.67e-08!9;UBERON:0002298!1.44e-07!8;UBERON:0001872!8.46e-07!5;UBERON:0002420!9.96e-07!9;UBERON:0007245!9.96e-07!9;UBERON:0010009!9.96e-07!9;UBERON:0010011!9.96e-07!9;UBERON:0000454!9.96e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.61e-28;34!UBERON:0002619;2.56e-27;22!UBERON:0003528;2.04e-26;34!UBERON:0002020;2.04e-26;34!UBERON:0000073;2.30e-26;53!UBERON:0002616;2.30e-26;53!UBERON:0001869;6.68e-26;32!UBERON:0002780;5.31e-25;41!UBERON:0001890;5.31e-25;41!UBERON:0002791;6.07e-25;32!UBERON:0001950;1.58e-24;20!UBERON:0000956;1.81e-23;25!UBERON:0000203;1.81e-23;25!UBERON:0001017;6.39e-20;75!UBERON:0000955;1.17e-19;68!UBERON:0007023;1.86e-19;114!UBERON:0001016;9.17e-17;83!UBERON:0004732;1.05e-14;13!UBERON:0004733;2.73e-13;12!UBERON:0002028;2.73e-13;12!UBERON:0000200;1.51e-12;6!UBERON:0002298;1.55e-12;6!UBERON:0001872;3.01e-10;5!UBERON:0000125;1.02e-09;9!UBERON:0002308;1.02e-09;9!UBERON:0000178;1.70e-08;15!UBERON:0000179;1.70e-08;15!UBERON:0000463;1.70e-08;15!UBERON:0002680;2.11e-08;9!UBERON:0001895;2.11e-08;9!UBERON:0011216;1.55e-07;132!UBERON:0002021;2.56e-07;5!UBERON:0000988;3.66e-07;3!UBERON:0001896;5.04e-07;3!UBERON:0001870;5.04e-07;3!UBERON:0005290;5.04e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.06e-70,114;UBERON:0001049,8.89e-52,56;UBERON:0005068,8.89e-52,56;UBERON:0006241,8.89e-52,56;UBERON:0007135,8.89e-52,56;UBERON:0000073,4.82e-47,53;UBERON:0002616,4.82e-47,53;UBERON:0001017,9.33e-45,81;UBERON:0000955,7.59e-44,68;UBERON:0006238,7.59e-44,68;UBERON:0001016,1.09e-40,89;UBERON:0003075,5.26e-35,82;UBERON:0007284,5.26e-35,82;UBERON:0002780,9.42e-35,41;UBERON:0001890,9.42e-35,41;UBERON:0003080,9.42e-35,41;UBERON:0006240,9.42e-35,41;UBERON:0002346,9.51e-33,86;UBERON:0001893,8.41e-32,34;UBERON:0003528,9.26e-32,34;UBERON:0002020,9.26e-32,34;UBERON:0001869,6.02e-29,32;UBERON:0002791,1.99e-28,32;UBERON:0002619,2.91e-27,22;UBERON:0010371,3.70e-26,104;UBERON:0001950,1.79e-24,20;UBERON:0003056,6.48e-24,61;UBERON:0000956,2.02e-23,25;UBERON:0000203,2.02e-23,25;UBERON:0010314,4.24e-21,132;UBERON:0004121,6.88e-20,171;UBERON:0000924,6.88e-20,171;UBERON:0006601,6.88e-20,171;UBERON:0011216,6.17e-19,223;UBERON:0003076,6.55e-18,15;UBERON:0003057,6.55e-18,15;UBERON:0004732,1.08e-14,13;UBERON:0004733,2.77e-13,12;UBERON:0002028,2.77e-13,12;UBERON:0007277,2.77e-13,12;UBERON:0000200,1.49e-12,6;UBERON:0002298,1.58e-12,6;UBERON:0001872,3.41e-10,5;UBERON:0000025,4.06e-10,192;UBERON:0000125,9.97e-10,9;UBERON:0002308,9.97e-10,9;UBERON:0004111,3.44e-09,240;UBERON:0000922,5.25e-09,592;UBERON:0000923,1.37e-08,560;UBERON:0010316,1.37e-08,560;UBERON:0005291,1.37e-08,560;UBERON:0006598,1.37e-08,560;UBERON:0010317,1.37e-08,560;UBERON:0002532,1.37e-08,560;UBERON:0000178,1.67e-08,15;UBERON:0000179,1.67e-08,15;UBERON:0000463,1.67e-08,15;UBERON:0005423,1.68e-08,581;UBERON:0002680,2.12e-08,9;UBERON:0001895,2.12e-08,9;UBERON:0010092,2.12e-08,9;UBERON:0002050,2.30e-08,564;UBERON:0002021,2.56e-07,5;UBERON:0000988,3.67e-07,3;UBERON:0001870,5.04e-07,3;UBERON:0001896,5.14e-07,3;UBERON:0005290,5.14e-07,3;UBERON:0010096,5.14e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0.895661896959697,1.94336199611388,0.515151135268373,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0,1.32171328579026,1.68152568894461,1.05353633910031,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0.25618263945135,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,24.4275975803234,0,0,0,0,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,2.46217006087397,3.04205544681009,2.0808362720422,0,0,0,0,0,0,90.1573725349577,46.0493309889172,7.25648404392702,4.32359860250884,4.03975786964416,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.099972991182057,3.64871341923571,0,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,1.53481913652154,1.0457418040996,0,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7887322147588,0,0,0,0,10.1489521846434,5.35246044999663,4.5571774973933,5.95579438644473,6.17043409629291,6.48473311192717,5.40031437238115,5.55187623405989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0.33307196799782,16.9184406105419,0,0.586032717087576,0,0,0,0,0.890894042497916,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,3.98495976502139,1.93398740871803,0,0,0.123084805461069,0,0,0,0,1.08507746200627,7.18449277040819,0,81.4239506719984,74.7710871184521,1.99613798001194,1.30213880542617,5.33505999976794,0,0,0,0,0,0,0.173624994933292,4.42870692906919,0,437.909583230029,232.548183635365,529.03023792685,65.5962337490378,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0.498635045700469,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0.86494757262552,0.835375596043643,34.644182352068,2.40773294189637,208.495356695552,0,0,0,0,0,3.36680037793539,2.33790344625405,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,2.44617335538842,0,0,0,0,0.0969890164884194,0,110.956543723241,0,0,45.6470838841885,0.195551382734803,0,0.85381197895741,0,0,0,0,0,0,0,3.39760515184035,2.510468311496,0,0,13.2092463516154,8.89884962797955,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,4.77137813885582,2.17925449778521,0.321506296930038,0.137539436597234,0,0,0.77380195455795,32.1972650287531,0,43.1067218926614,14.3725571489895,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,3.22414914091781,2.65013777824443,138.591329219582,21.2894488805731,0,0,0.320362237703084,0.157204305099666,0.828478110694391,0,0.197611631897944,0,0,0,0,0,0,0,46.0755453582833,24.6493055101966,34.302315013581,21.2161402405326,44.4825496662778,102.086486435634,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,27.3751703580427,0,0,0.163565394255844,0,0,0,0.59996218756479,0,0,0,0,0,7.46492712039567,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,22.0948534331821,123.276021403259,31.1286025161445,117.736793074193,0.252071696221718,218.606075039393,15.0172350437622,4.28308260777463,0,0.11796972334774,0,0,0,0,0,0.150420656698515,0,0,0,0,0,119.946750282269,39.8349830293062,69.2400768278967,89.7967872345721,1.09394961803644,1.09651553371436,0,0.175871244359621,0,1.07140367175657,0,0,0.227662191351298,0.620916591138472,0,0,99.9155074759426,156.670746626707,0,0,1.41287567130925,0.471346769748006,0,0,0,0,142.524229088253,0,0,0,0,0,0,0,3.44181887056222,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,2.33939463462106,0,0,0,0,0,0.154348316215889,0,0,0.490296643507811,0,19.8271551786095,4.1586496045792,21.5554421067534,0,1.50374268767766,1.74036297528658,0,0,0,0,0,7.33966853447265,1.43339583151451,0,65.4078135636599,0.872701380680755,6.34832208618481,0,0,0,0,0,0.126698501011437,0,0.26721740526556,0,0,0.0757786982182394,1.87574891109325,327.521928586218,9.20553663170868,0.213233981900981,6.18967521805725,0.193766729508018,0.434523000071005,0,6.36471582781649,6.2656328577048,0,0,1.01028079521881,0.215166616178029,1.33064142618405,0,0,0,0,0,0.122241444182866,0.813792356631477,6.65756774185513,1.61019034872821,0 | |||
|short_description=p1@PVALB | |||
}} |
Revision as of 15:44, 21 January 2014
Short description: | p1@PVALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PVALB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000417718, ENST00000467935, uc010gwz.2_5end |
EntrezGene: | PVALB |
HGNC: | 9704 |
UniProt: | P20472 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.43e-10 | 5 |
basophil mast progenitor cell | 8.43e-10 | 5 |
macrophage | 4.97e-07 | 6 |