FFCP PHASE1:Hg19::chr22:36902522..36902540,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80020 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26264 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IWF2 | |||
|association_with_transcript=36bp_to_ENST00000397223,uc003apn.3_5end | |||
|description=CAGE_peak_6_at_FOXRED2_5end | |||
|id=chr22:36902522..36902540,- | |||
|ontology_enrichment_celltype=CL:0000039!3.26e-17!7;CL:0000586!3.26e-17!7;CL:0002563!4.75e-12!4;CL:0002253!4.49e-11!2 | |||
|ontology_enrichment_celltype_v019=CL:0002563;3.92e-19;4!CL:0002253;1.98e-10;2!CL:0002535;3.13e-10;2!CL:0002076;1.74e-07;42!CL:0002231;1.99e-07;3!CL:0000322;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.92e-19,4;CL:0002253,1.89e-10,2;CL:0002535,2.99e-10,2;CL:0000223,6.81e-08,58;CL:0002231,1.93e-07,3;CL:0000322,2.47e-07,3;CL:0002076,2.94e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0008425;8.95e-20;1 | |||
|ontology_enrichment_disease=DOID:4362!1.34e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:1799;4.28e-19;1!DOID:10165;4.28e-19;1!DOID:1798;4.28e-19;1!DOID:4362;3.35e-15;5!DOID:1325;2.30e-11;7!DOID:3904;2.30e-11;7!DOID:3910;2.37e-10;2!DOID:3905;4.80e-09;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.25e-19,1;DOID:10165,3.25e-19,1;DOID:1798,3.25e-19,1;DOID:4362,3.61e-15,5;DOID:1325,2.30e-11,7;DOID:3904,2.30e-11,7;DOID:305,1.96e-10,106;DOID:3910,2.27e-10,2;DOID:3905,4.80e-09,9;DOID:0050687,1.36e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001242!4.75e-12!4;UBERON:0001262!4.75e-12!4;UBERON:0004786!4.75e-12!4;UBERON:0004808!4.75e-12!4;UBERON:0001277!4.75e-12!4;UBERON:0000473!5.80e-10!8;UBERON:0003350!9.98e-10!5;UBERON:0000002!4.54e-08!6;UBERON:0001560!4.54e-08!6;UBERON:0003135!2.92e-07!11;UBERON:0000060!6.14e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;3.92e-19;4!UBERON:0001262;3.92e-19;4!UBERON:0004786;3.92e-19;4!UBERON:0004808;3.92e-19;4!UBERON:0001277;3.92e-19;4!UBERON:0000002;7.78e-13;6!UBERON:0001560;7.78e-13;6!UBERON:0000485;2.30e-11;7!UBERON:0003929;2.30e-11;7!UBERON:0004903;2.37e-10;2!UBERON:0002173;2.37e-10;2!UBERON:0002186;2.37e-10;2!UBERON:0006955;3.13e-10;2!UBERON:0004801;3.13e-10;2!UBERON:0003350;4.62e-10;8!UBERON:0005911;5.80e-09;36!UBERON:0004821;2.55e-07;3!UBERON:0007499;2.55e-07;3!UBERON:0003215;2.55e-07;3!UBERON:0010368;2.55e-07;3!UBERON:0009911;2.55e-07;3!UBERON:0002299;2.55e-07;3!UBERON:0006524;2.55e-07;3!UBERON:0008874;2.55e-07;3!UBERON:0002169;2.55e-07;3!UBERON:0004894;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,3.92e-19,4;UBERON:0001262,3.92e-19,4;UBERON:0004786,3.92e-19,4;UBERON:0004808,3.92e-19,4;UBERON:0001277,3.92e-19,4;UBERON:0000002,8.27e-13,6;UBERON:0001560,8.27e-13,6;UBERON:0004903,2.27e-10,2;UBERON:0002173,2.27e-10,2;UBERON:0002186,2.27e-10,2;UBERON:0006955,2.99e-10,2;UBERON:0004801,2.99e-10,2;UBERON:0003350,4.62e-10,8;UBERON:0000485,4.80e-09,9;UBERON:0005153,3.03e-08,37;UBERON:0004821,2.47e-07,3;UBERON:0003215,2.47e-07,3;UBERON:0010368,2.47e-07,3;UBERON:0009911,2.47e-07,3;UBERON:0002299,2.47e-07,3;UBERON:0006524,2.47e-07,3;UBERON:0008874,2.47e-07,3;UBERON:0002169,2.47e-07,3;UBERON:0004894,2.47e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19769940212095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,4.71351853407327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,2.05854594449042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73441999970707,0,0,2.2882828526349,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0,0.21787692703798,0,0,0,0.23056390438806,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,3.39247371441458,0.216388639742091,0,0,0,0,0,0,0,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,1.83334686136996,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,1.16969731731053,0,0,0,0,4.67984815056688,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60330443159336,0,0.752122617877125,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@FOXRED2 | |||
}} |
Revision as of 15:42, 21 January 2014
Short description: | p6@FOXRED2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FOXRED2_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_ENST00000397223, uc003apn.3_5end |
EntrezGene: | FOXRED2 |
HGNC: | 26264 |
UniProt: | Q8IWF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.92e-19 | 4 |
epithelial cell of large intestine | 1.89e-10 | 2 |
epithelial cell of cervix | 2.99e-10 | 2 |
endodermal cell | 6.81e-08 | 58 |
epithelial cell of prostate | 1.93e-07 | 3 |
pneumocyte | 2.47e-07 | 3 |
endo-epithelial cell | 2.94e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 3.92e-19 | 4 |
wall of intestine | 3.92e-19 | 4 |
gastrointestinal system mucosa | 3.92e-19 | 4 |
gastrointestinal system epithelium | 3.92e-19 | 4 |
intestinal epithelium | 3.92e-19 | 4 |
uterine cervix | 8.27e-13 | 6 |
neck of organ | 8.27e-13 | 6 |
bronchoalveolar duct junction | 2.27e-10 | 2 |
alveolar duct | 2.27e-10 | 2 |
bronchiole | 2.27e-10 | 2 |
uterine epithelium | 2.99e-10 | 2 |
cervix epithelium | 2.99e-10 | 2 |
epithelium of mucosa | 4.62e-10 | 8 |
simple columnar epithelium | 4.80e-09 | 9 |
epithelial bud | 3.03e-08 | 37 |
pulmonary alveolus epithelium | 2.47e-07 | 3 |
alveolus | 2.47e-07 | 3 |
pulmonary lobule | 2.47e-07 | 3 |
lobule | 2.47e-07 | 3 |
alveolus of lung | 2.47e-07 | 3 |
alveolar system | 2.47e-07 | 3 |
pulmonary acinus | 2.47e-07 | 3 |
alveolar sac | 2.47e-07 | 3 |
alveolar wall | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.25e-19 | 1 |
endocrine pancreas cancer | 3.25e-19 | 1 |
pancreatic endocrine carcinoma | 3.25e-19 | 1 |
cervical cancer | 3.61e-15 | 5 |
bronchus cancer | 2.30e-11 | 7 |
bronchogenic carcinoma | 2.30e-11 | 7 |
carcinoma | 1.96e-10 | 106 |
lung adenocarcinoma | 2.27e-10 | 2 |
lung carcinoma | 4.80e-09 | 9 |
cell type cancer | 1.36e-07 | 143 |