FFCP PHASE1:Hg19::chr21:45845527..45845538,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7226 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12339 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=88bp_to_ENST00000490982_5end | |||
|description=CAGE_peak_8_at_TRPM2_5end | |||
|id=chr21:45845527..45845538,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.29e-10!254;CL:0002178!1.60e-08!3;CL:0002150!4.24e-08!3;CL:0000861!4.24e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.18e-12;3!CL:0000167;6.32e-10;1!CL:0000164;6.32e-10;1!CL:0000502;6.32e-10;1!CL:0000172;6.32e-10;1!CL:0000173;6.32e-10;1!CL:0000082;1.23e-07;19!CL:0002149;9.41e-07;6!CL:0002255;9.41e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.41e-12,3;CL:0000167,3.71e-10,1;CL:0000164,3.71e-10,1;CL:0000502,3.71e-10,1;CL:0000172,3.71e-10,1;CL:0000173,3.71e-10,1;CL:0002351,3.71e-10,1;CL:0000082,1.06e-07,19 | |||
|ontology_enrichment_development_v019=CL:0002351;6.32e-10;1!UBERON:0008947;1.97e-07;29 | |||
|ontology_enrichment_disease=DOID:305!1.66e-32!106;DOID:0050687!1.99e-32!143;DOID:14566!4.04e-23!239;DOID:162!5.94e-23!235;DOID:3119!8.27e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1325;4.57e-12;7!DOID:3904;4.57e-12;7!DOID:0060085;6.32e-10;1!DOID:3165;6.32e-10;1!DOID:0060121;6.32e-10;1!DOID:2438;6.32e-10;1!DOID:4418;6.32e-10;1!DOID:4430;6.32e-10;1!DOID:5409;8.25e-10;4!DOID:1324;1.22e-09;15!DOID:3905;2.49e-09;9!DOID:0050615;4.79e-09;16!DOID:4362;6.09e-08;5!DOID:3001;9.41e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,3.86e-12,7;DOID:3904,3.86e-12,7;DOID:305,1.06e-11,106;DOID:0050687,4.06e-11,143;DOID:4430,3.71e-10,1;DOID:162,4.11e-10,235;DOID:0050686,6.21e-10,137;DOID:5409,6.63e-10,4;DOID:0060085,7.55e-10,1;DOID:3165,7.55e-10,1;DOID:0060121,7.55e-10,1;DOID:2438,7.55e-10,1;DOID:4418,7.55e-10,1;DOID:14566,7.78e-10,239;DOID:1324,1.01e-09,15;DOID:3905,1.93e-09,9;DOID:0050615,4.01e-09,16;DOID:4362,5.69e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.27e-20!9;UBERON:0001557!1.63e-10!19;UBERON:0000077!1.90e-10!130;UBERON:0001041!6.65e-10!98;UBERON:0008947!2.29e-09!38;UBERON:0003258!2.29e-09!38;UBERON:0004921!7.54e-09!129;UBERON:0004185!7.54e-09!129;UBERON:0000072!2.49e-08!46;UBERON:0001007!4.12e-08!155;UBERON:0001555!4.12e-08!155;UBERON:0007026!4.12e-08!155;UBERON:0002075!2.12e-07!18;UBERON:0004119!2.20e-07!169;UBERON:0000925!2.20e-07!169;UBERON:0006595!2.20e-07!169;UBERON:0000065!9.09e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0000995;1.89e-08;17!UBERON:0001264;2.17e-08;10!UBERON:0003975;5.49e-08;18!UBERON:0000945;6.09e-08;5!UBERON:0010039;6.09e-08;5!UBERON:0004802;1.23e-07;19!UBERON:0000115;1.23e-07;19!UBERON:0004175;7.31e-07;21!UBERON:0000002;9.41e-07;6!UBERON:0001560;9.41e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.96e-08,10;UBERON:0005153,3.15e-08,37;UBERON:0004802,1.06e-07,19;UBERON:0000115,1.06e-07,19;UBERON:0000995,7.43e-07,21;UBERON:0000002,8.89e-07,6;UBERON:0001560,8.89e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,0.674338760312407,1.20505514941741,0.772057809126758,0.435758888184812,0.237270619111097,0.539325232640658,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53735113621709,0,3.4504441124869,0,0.088048434013226,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26739473068848,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,3.07303986298317,0.689486746482929,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0.922255617552241,1.07709173291727,0,0,0,0,0,0,0,0.451191321234361,0,0,0,0.476809736941136,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,1.36965233252463,0,0,0,0,0,0,0,2.65861549082874,0,1.2557316736289,0,0,0,2.60339607502696,0.0979923974143777,0,0,0,0.483781656445426,1.0232504392066,0.739039113478883,0,0,0,0,1.19228767021794,0,0.782205530939212,0.160317640503067,0,1.19885765749278,2.01726584015748,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0,1.43429871466276,0,0,0,0,0,0,0,0,0,0,0.906496732161005,0,0,0,0,0.513260513652988,0,0,0,0,0,2.96417447846916,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0.110929051536852,0,0,0,0.909894705249887,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.462102664601353,0,0,0,0,0,0,0.785720083444267,0,0.591424344868181,0,0,0.206686796501184,0,0,0,0,0,0.383287282918786,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0.354581522651905,1.77970243027311,0,0,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,1.14553434272025,0,0,0,0.687051635306701,0,0,0,0,0,1.40363678077263,0,1.54596118010839,0,0,4.22695961986686,0,0,0,0,1.64973582971138,0,0,0,0,0,0.0644578879735772,0,0.892769693028288,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0.504665699340316,0,0,0.305966489225945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718601616852695,0,0,0,0,0,0 | |||
|short_description=p8@TRPM2 | |||
}} |
Revision as of 14:11, 21 January 2014
Short description: | p8@TRPM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TRPM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 88bp_to_ENST00000490982_5end |
EntrezGene: | TRPM2 |
HGNC: | 12339 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.41e-12 | 3 |
peptide hormone secreting cell | 3.71e-10 | 1 |
enteroendocrine cell | 3.71e-10 | 1 |
type D enteroendocrine cell | 3.71e-10 | 1 |
somatostatin secreting cell | 3.71e-10 | 1 |
pancreatic D cell | 3.71e-10 | 1 |
progenitor cell of endocrine pancreas | 3.71e-10 | 1 |
epithelial cell of lung | 1.06e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
pancreas | 1.96e-08 | 10 |
epithelial bud | 3.15e-08 | 37 |
respiratory tract epithelium | 1.06e-07 | 19 |
lung epithelium | 1.06e-07 | 19 |
uterus | 7.43e-07 | 21 |
uterine cervix | 8.89e-07 | 6 |
neck of organ | 8.89e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 3.86e-12 | 7 |
bronchogenic carcinoma | 3.86e-12 | 7 |
carcinoma | 1.06e-11 | 106 |
cell type cancer | 4.06e-11 | 143 |
somatostatinoma | 3.71e-10 | 1 |
cancer | 4.11e-10 | 235 |
organ system cancer | 6.21e-10 | 137 |
lung small cell carcinoma | 6.63e-10 | 4 |
organ system benign neoplasm | 7.55e-10 | 1 |
skin benign neoplasm | 7.55e-10 | 1 |
integumentary system benign neoplasm | 7.55e-10 | 1 |
dermis tumor | 7.55e-10 | 1 |
cutaneous fibrous histiocytoma | 7.55e-10 | 1 |
disease of cellular proliferation | 7.78e-10 | 239 |
lung cancer | 1.01e-09 | 15 |
lung carcinoma | 1.93e-09 | 9 |
respiratory system cancer | 4.01e-09 | 16 |
cervical cancer | 5.69e-08 | 5 |