FFCP PHASE1:Hg19::chr21:42741979..42742031,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4600 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7533 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z5D3 | |||
|association_with_transcript=0bp_to_ENST00000543692,uc011aer.1_5end | |||
|description=CAGE_peak_2_at_MX2_5end | |||
|id=chr21:42741979..42742031,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.66e-37!140;CL:0000037!1.36e-32!172;CL:0000566!1.36e-32!172;CL:0002087!1.68e-30!119;CL:0002032!2.42e-29!165;CL:0000837!2.42e-29!165;CL:0000988!4.50e-29!182;CL:0002031!7.81e-28!124;CL:0000542!3.14e-21!53;CL:0000051!3.14e-21!53;CL:0000838!2.22e-20!52;CL:0000766!5.76e-13!76;CL:0000791!7.28e-12!18;CL:0000789!7.28e-12!18;CL:0002420!7.28e-12!18;CL:0002419!7.28e-12!18;CL:0000790!7.28e-12!18;CL:0000763!7.10e-11!112;CL:0000049!7.10e-11!112;CL:0000945!1.12e-10!24;CL:0000826!1.12e-10!24;CL:0000557!1.41e-10!71;CL:0000839!1.50e-09!70;CL:0002194!2.10e-09!63;CL:0000576!2.10e-09!63;CL:0000040!2.10e-09!63;CL:0000559!2.10e-09!63;CL:0002009!2.30e-09!65;CL:0000084!2.49e-09!25;CL:0000827!2.49e-09!25;CL:0000625!3.56e-09!11;CL:0000236!1.17e-07!14;CL:0002057!7.75e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.21e-19;53!CL:0000791;3.68e-18;18!CL:0000789;3.68e-18;18!CL:0002419;3.68e-18;18!CL:0000945;2.00e-16;24!CL:0000084;1.48e-15;25!CL:0000625;1.36e-13;11!CL:0002087;4.72e-12;104!CL:0000236;2.01e-09;13!CL:0002322;8.91e-09;5!CL:0000738;5.13e-08;136!CL:0000624;1.45e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.75e-39,136;CL:0000037,2.21e-38,168;CL:0002087,1.10e-35,115;CL:0000542,2.13e-35,53;CL:0000051,2.13e-35,53;CL:0000988,4.20e-35,177;CL:0000838,5.36e-34,52;CL:0002032,1.72e-33,161;CL:0000837,1.72e-33,161;CL:0002031,2.64e-30,120;CL:0000791,1.50e-18,18;CL:0000789,1.50e-18,18;CL:0002420,1.50e-18,18;CL:0002419,1.50e-18,18;CL:0000790,1.50e-18,18;CL:0000945,2.12e-16,24;CL:0000826,2.12e-16,24;CL:0000084,7.36e-16,25;CL:0000827,7.36e-16,25;CL:0000625,7.94e-14,11;CL:0000236,1.48e-10,14;CL:0002322,8.71e-09,5;CL:0000134,6.08e-08,354;CL:0000624,9.54e-08,6;CL:0000763,9.79e-08,108;CL:0000049,9.79e-08,108;CL:0002320,2.14e-07,361;CL:0000766,2.84e-07,72;CL:0000219,8.72e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000051;2.21e-19;53!CL:0000790;3.68e-18;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.56e-19!115;UBERON:0002390!1.43e-14!102;UBERON:0003061!1.43e-14!102;UBERON:0002193!6.70e-13!112;UBERON:0002371!1.56e-08!80;UBERON:0002405!3.77e-08!115;UBERON:0001474!5.06e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.37e-07;15!UBERON:0000179;1.37e-07;15!UBERON:0000463;1.37e-07;15!UBERON:0002390;6.16e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.90e-12,98;UBERON:0003061,7.90e-12,98;UBERON:0002193,3.15e-11,108;UBERON:0000178,9.82e-08,15;UBERON:0000179,9.82e-08,15;UBERON:0000463,9.82e-08,15;UBERON:0002384,4.04e-07,371;UBERON:0002405,8.23e-07,93 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0,0.491467873003018,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,9.16960868975415,12.3150884174919,12.0427495409929,4.32700704533794,5.75744097145819,0.619264493264304,0,0,0,0,0,3.52320527201817,1.66198622559563,2.80762226458198,0.868043482863407,3.58264758783879,1.94336199611388,1.03030227053675,0.145398238779565,2.64513160582167,0,0,1.23350366406548,0,0,1.2808035326455,0.709446689665756,0,0.645484683583826,1.35426486594342,0,1.09162460023138,0.449446968890169,0,1.60464513538047,1.27867425159808,0.329851300186716,0.797854630486527,0,0,0.56738522469114,0,0.502497330513487,2.08593167368081,1.08594422352558,1.21079900526674,0.368277635987565,1.26584954976354,0.211255286311942,0.425208599930087,0,1.01095768031846,0.150176892841506,0.32145117339416,0.570025487482497,0.19891667719909,0.365328307529268,5.27988733383968,8.19207916893197,8.89509253863555,0,2.40237592221607,5.74752439954483,7.27149360063348,3.81621501814146,1.1384259382189,0.587237189370939,1.52909291250092,2.64342657158052,1.12101712596307,3.423993102076,2.16380747125216,7.8602152549833,1.64481199199607,2.34061093546949,4.88883399950386,3.78758244587787,0,1.55974639639243,2.94605907474837,2.87994062958707,2.70803863765016,1.5370958367081,1.1705341280389,2.30213066445147,0.552700035571697,2.60822777161547,8.74890722656157,2.1403266247177,3.1360657141493,1.47302145506836,1.53288197440768,1.03088233644789,3.03623630423403,8.60126618675061,4.55758417699493,2.85135613334512,1.6563263098555,2.55973222308837,7.49584359314075,8.28720382154059,4.92676798152628,3.42731463482045,4.81392352410313,1.59306844271079,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.72038491523742,0,0,0.324547393654683,0,0,10.9705687180457,13.1558829479429,7.05769252526173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0,0,0.423863802319124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9776335516636,9.54214331914694,17.8938672019058,10.2624444465217,11.8590799911545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,3.2925920906512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,1.4512968087854,0.720599767084807,1.00993946741104,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,1.2162378064119,2.00902836572851,2.10833939483032,0,0,0,0,0,0,0,3.94061520403854,2.37190332345469,1.02674429023799,0,0,0,0.167516265334349,0,0.749007023947182,2.99161459204025,0.828831026872071,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,1.6541442089831,3.23571301227925,1.81436848265855,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,1.6068392984416,0,0,0.307007349452259,0.551346289938122,0.214840489736547,1.16013355131383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,7.10426652925037,10.7049208999933,5.69647187174163,0.476463550915578,0.822724546172388,5.83625980073446,2.70015718619057,4.75875105776562,0,0,13.4772118789567,25.8266413424749,0,30.0218578930308,0,0,1.91505370132367,0,0,9.26630687774414,0,0,0,0,3.37234957717769,9.68638594517028,4.68430861459359,0,5.22309299324379,6.26293102098765,5.17232339306916,15.0448833459571,0,9.84699191581699,0,0,0,0,0.586032717087576,0,8.58114058936583,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,1.19548792950642,0.828851746593443,0,0,18.5858056246215,0,0,0,0,0.591860433821602,4.7896618469388,0,0,0.463840490809256,0,0,0,0,0,0,0,0.344743373241465,0,0,1.77148277162768,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0,0.461701551022782,0,0.23056390438806,0,0,0,0.549585560411174,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,1.85760885457012,0,0,0,0,0.539209063845416,0,0,21.7121199166643,0,6.7978506269546,0.394584402849391,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581934098930517,0,0.451961481561065,0,0,0.189932387867636,0,0,1.70762395791482,16.7840072048989,0,0,5.66263492944483,0,0,1.17847017308398,0,0,0,0,1.20084057741958,0,1.27746588066972,0.429765441419957,0,0.558564802544508,0,1.43574604915363,0.399358000997982,0.429226048136571,0,0,0,0,8.19345095995126,8.07675412135431,8.82986424489822,0,11.3462264968151,0,0.272406812223151,0.482259445395058,0.550157746388935,0,0.674921674654501,0,0.546746009922222,0,0.472834243795189,0.629455057619977,0,0,0,2.1440859791201,0,0,3.80099721227599,0,0,0,0,0,23.3422908531459,0.439656701034247,0,0.517131825446202,0,0,0,0.533937062838473,0,0,3.47316215268366,0.197611631897944,2.80122976276061,0,0,0,0.306345576763462,0,0,1.77213635993397,0.488105059607853,0.250381861413,0.573409195690071,0.221858103073705,0.310482014706917,0,0,0,0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| |||
|short_description=p2@MX2 | |||
}} |
Revision as of 13:54, 21 January 2014
Short description: | p2@MX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000543692, uc011aer.1_5end |
EntrezGene: | MX2 |
HGNC: | 7533 |
UniProt: | B7Z5D3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.75e-39 | 136 |
hematopoietic stem cell | 2.21e-38 | 168 |
nongranular leukocyte | 1.10e-35 | 115 |
lymphocyte | 2.13e-35 | 53 |
common lymphoid progenitor | 2.13e-35 | 53 |
hematopoietic cell | 4.20e-35 | 177 |
lymphoid lineage restricted progenitor cell | 5.36e-34 | 52 |
hematopoietic oligopotent progenitor cell | 1.72e-33 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-33 | 161 |
hematopoietic lineage restricted progenitor cell | 2.64e-30 | 120 |
mature alpha-beta T cell | 1.50e-18 | 18 |
alpha-beta T cell | 1.50e-18 | 18 |
immature T cell | 1.50e-18 | 18 |
mature T cell | 1.50e-18 | 18 |
immature alpha-beta T cell | 1.50e-18 | 18 |
lymphocyte of B lineage | 2.12e-16 | 24 |
pro-B cell | 2.12e-16 | 24 |
T cell | 7.36e-16 | 25 |
pro-T cell | 7.36e-16 | 25 |
CD8-positive, alpha-beta T cell | 7.94e-14 | 11 |
B cell | 1.48e-10 | 14 |
embryonic stem cell | 8.71e-09 | 5 |
mesenchymal cell | 6.08e-08 | 354 |
CD4-positive, alpha-beta T cell | 9.54e-08 | 6 |
myeloid cell | 9.79e-08 | 108 |
common myeloid progenitor | 9.79e-08 | 108 |
connective tissue cell | 2.14e-07 | 361 |
myeloid leukocyte | 2.84e-07 | 72 |
motile cell | 8.72e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.90e-12 | 98 |
blood island | 7.90e-12 | 98 |
hemolymphoid system | 3.15e-11 | 108 |
blood | 9.82e-08 | 15 |
haemolymphatic fluid | 9.82e-08 | 15 |
organism substance | 9.82e-08 | 15 |
connective tissue | 4.04e-07 | 371 |
immune system | 8.23e-07 | 93 |