FFCP PHASE1:Hg19::chr21:34100244..34100277,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8867 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11503 | |||
|TSSclassifier=strong | |||
|UniProt=O43426,C9JW66,B9EGN3 | |||
|association_with_transcript=0bp_to_ENST00000357345,ENST00000382491,ENST00000429236,NM_001160302,NM_001160306,uc002yqf.2,uc002yqg.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SYNJ1_5end | |||
|id=chr21:34100244..34100277,- | |||
|ontology_enrichment_celltype=CL:0000738!6.63e-12!140;CL:0000037!9.61e-12!172;CL:0000566!9.61e-12!172;CL:0000988!8.85e-11!182;CL:0002032!1.53e-10!165;CL:0000837!1.53e-10!165;CL:0000766!1.70e-10!76;CL:0000763!2.92e-09!112;CL:0000049!2.92e-09!112;CL:0002031!4.79e-09!124;CL:0002087!2.11e-08!119;CL:0000839!3.84e-08!70;CL:0000557!7.43e-08!71;CL:0000860!3.15e-07!45;CL:0002057!3.19e-07!42;CL:0002194!3.30e-07!63;CL:0000576!3.30e-07!63;CL:0000040!3.30e-07!63;CL:0000559!3.30e-07!63;CL:0002009!6.59e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.28e-08;18!CL:0000789;9.28e-08;18!CL:0002419;9.28e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.75e-11,136;CL:0000766,1.58e-10,72;CL:0000037,1.72e-09,168;CL:0000791,1.00e-08,18;CL:0000789,1.00e-08,18;CL:0002420,1.00e-08,18;CL:0002419,1.00e-08,18;CL:0000790,1.00e-08,18;CL:0002032,1.31e-08,161;CL:0000837,1.31e-08,161;CL:0000988,1.35e-08,177;CL:0002087,1.75e-08,115;CL:0002031,4.68e-08,120;CL:0002194,9.48e-08,59;CL:0000576,9.48e-08,59;CL:0000040,9.48e-08,59;CL:0000559,9.48e-08,59;CL:0002009,3.01e-07,61;CL:0000839,3.66e-07,66;CL:0000557,3.98e-07,67;CL:0000084,4.30e-07,25;CL:0000827,4.30e-07,25;CL:0000763,4.80e-07,108;CL:0000049,4.80e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.02e-10;82!CL:0000790;9.28e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.31e-29!115;UBERON:0001049!6.52e-28!57;UBERON:0005068!6.52e-28!57;UBERON:0006241!6.52e-28!57;UBERON:0007135!6.52e-28!57;UBERON:0001017!3.93e-25!82;UBERON:0000955!1.37e-24!69;UBERON:0006238!1.37e-24!69;UBERON:0005743!3.23e-24!86;UBERON:0003080!6.76e-24!42;UBERON:0002780!1.55e-23!41;UBERON:0001890!1.55e-23!41;UBERON:0006240!1.55e-23!41;UBERON:0002616!2.50e-23!59;UBERON:0000073!1.01e-21!94;UBERON:0001016!1.01e-21!94;UBERON:0001893!3.48e-19!34;UBERON:0002020!5.57e-19!34;UBERON:0003528!5.57e-19!34;UBERON:0002791!1.70e-18!33;UBERON:0003075!1.71e-18!86;UBERON:0007284!1.71e-18!86;UBERON:0001869!3.27e-18!32;UBERON:0002346!3.69e-18!90;UBERON:0002619!1.55e-15!22;UBERON:0003056!3.31e-15!61;UBERON:0001950!2.35e-14!20;UBERON:0000956!4.08e-14!25;UBERON:0000203!4.08e-14!25;UBERON:0000153!6.91e-11!129;UBERON:0007811!6.91e-11!129;UBERON:0000033!1.04e-09!123;UBERON:0002390!3.05e-09!102;UBERON:0003061!3.05e-09!102;UBERON:0000924!1.72e-07!173;UBERON:0006601!1.72e-07!173;UBERON:0004121!1.92e-07!169;UBERON:0002193!3.54e-07!112;UBERON:0002420!9.43e-07!9;UBERON:0007245!9.43e-07!9;UBERON:0010009!9.43e-07!9;UBERON:0010011!9.43e-07!9;UBERON:0000454!9.43e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.27e-28;41!UBERON:0001890;4.27e-28;41!UBERON:0002619;1.08e-26;22!UBERON:0001893;1.89e-26;34!UBERON:0001869;2.04e-26;32!UBERON:0003528;2.94e-26;34!UBERON:0002020;2.94e-26;34!UBERON:0002791;3.32e-26;32!UBERON:0000073;3.79e-25;53!UBERON:0002616;3.79e-25;53!UBERON:0001950;1.59e-24;20!UBERON:0000956;1.56e-22;25!UBERON:0000203;1.56e-22;25!UBERON:0000955;2.52e-17;68!UBERON:0001017;5.60e-16;75!UBERON:0001016;2.48e-14;83!UBERON:0007023;1.08e-12;114!UBERON:0002420;1.28e-10;9!UBERON:0007245;1.28e-10;9!UBERON:0010009;1.28e-10;9!UBERON:0010011;1.28e-10;9!UBERON:0000454;1.28e-10;9!UBERON:0000125;9.07e-10;9!UBERON:0002308;9.07e-10;9!UBERON:0001894;3.66e-09;7!UBERON:0000200;1.33e-08;6!UBERON:0001871;1.85e-08;6!UBERON:0009663;3.36e-08;7!UBERON:0000349;1.87e-07;5!UBERON:0002021;2.52e-07;5!UBERON:0001872;3.27e-07;5!UBERON:0002298;6.94e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.67e-47,56;UBERON:0005068,4.67e-47,56;UBERON:0006241,4.67e-47,56;UBERON:0007135,4.67e-47,56;UBERON:0000073,2.10e-44,53;UBERON:0002616,2.10e-44,53;UBERON:0002780,2.07e-39,41;UBERON:0001890,2.07e-39,41;UBERON:0003080,2.07e-39,41;UBERON:0006240,2.07e-39,41;UBERON:0001017,3.97e-38,81;UBERON:0000955,5.20e-37,68;UBERON:0006238,5.20e-37,68;UBERON:0007023,7.98e-35,114;UBERON:0001016,1.60e-34,89;UBERON:0001893,1.34e-31,34;UBERON:0003528,3.07e-31,34;UBERON:0002020,3.07e-31,34;UBERON:0003075,3.25e-30,82;UBERON:0007284,3.25e-30,82;UBERON:0001869,7.62e-30,32;UBERON:0002791,1.76e-29,32;UBERON:0002346,6.21e-29,86;UBERON:0002619,1.16e-26,22;UBERON:0003056,1.45e-24,61;UBERON:0001950,1.55e-24,20;UBERON:0010371,5.08e-23,104;UBERON:0000956,1.65e-22,25;UBERON:0000203,1.65e-22,25;UBERON:0010314,8.47e-15,132;UBERON:0004121,2.01e-13,171;UBERON:0000924,2.01e-13,171;UBERON:0006601,2.01e-13,171;UBERON:0002420,6.87e-11,9;UBERON:0007245,6.87e-11,9;UBERON:0010009,6.87e-11,9;UBERON:0010011,6.87e-11,9;UBERON:0000454,6.87e-11,9;UBERON:0000125,3.72e-10,9;UBERON:0002308,3.72e-10,9;UBERON:0011216,4.15e-10,223;UBERON:0001894,3.35e-09,7;UBERON:0006222,3.35e-09,7;UBERON:0003076,4.23e-09,15;UBERON:0003057,4.23e-09,15;UBERON:0000200,1.32e-08,6;UBERON:0001871,1.76e-08,6;UBERON:0009663,1.80e-08,7;UBERON:0002390,2.33e-08,98;UBERON:0003061,2.33e-08,98;UBERON:0000349,2.11e-07,5;UBERON:0002021,2.78e-07,5;UBERON:0001872,2.92e-07,5;UBERON:0002298,6.67e-07,6;UBERON:0004733,8.82e-07,12;UBERON:0002028,8.82e-07,12;UBERON:0007277,8.82e-07,12 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0.436882744260345,0,0.37129905888014,0.994192127183747,0,0,0,0,0.369363174230364,0.204000691244253,0,0.572471974262113,0.273748850145768,0.251085279189606,0.382067028739756,0.492603536699674,0.629686250509434,1.96682138424452,1.53531759238885,0.619264493264304,0,0.30120591877825,0,0.232401601740905,0.284338464974843,0.293600439334847,2.21598163412751,1.80490002723128,2.60413044859022,1.34349284543955,1.94336199611388,1.80302897343931,0.726991193897824,0.377875943688809,1.4555043671269,2.32429036905685,1.23350366406548,1.85823822537062,0,1.0246428261164,0.945928919554341,1.03423704220986,1.29096936716765,0,0.564727018627814,1.36453075028923,0.674170453335254,1.53041946185451,0.962787081228281,1.27867425159808,0.329851300186716,0.797854630486527,0.852449501065388,0.580418477257168,1.70215567407342,0,0.502497330513487,0.521482918420201,0.868755378820466,0,1.10483290796269,1.89877432464531,0.422510572623884,1.06302149982522,2.09658645508376,1.01095768031846,0.150176892841506,1.28580469357664,1.14005097496499,2.78483348078726,2.19196984517561,0,0.546138611262131,0.889509253863555,0,0,1.14950487990897,0,0,0.569212969109448,0,0.382273228125229,0,2.24203425192614,0.263384084775077,3.34406609193516,0,2.46721798799411,1.83905144929746,2.28145586643513,0.946895611469467,0,1.33692548262208,1.76763544484902,1.10766947291811,2.70803863765016,0.640456598628376,0.260118695119756,0.328875809207352,0.829050053357545,0,2.07601188426885,1.07016331235885,2.09071047609954,1.13309342697566,1.91610246800961,2.06176467289578,2.02415753615602,1.91139248594458,0.651083453856419,1.90090408889675,1.95747654801105,1.91979916731628,1.24930726552346,2.36777252044017,0,1.41124720257313,1.33720097891754,1.73789284659359,0,0,0,0.722878304769133,0,1.15877215168659,0,0.973269740605272,0.189069634328136,0.443458794925128,0.351339142772504,1.11332214173056,0,0,1.29818957461873,1.0447784237956,2.12732736830184,0.715471872916026,1.71598473234038,1.85728750664782,0,0,0,0,0,0.275118041940067,0.208994966536811,0.516833518338658,0,0.33472061276467,0,0,0,0,0.81014194788176,0.17859945656816,0,0,0,0,0.183201743930407,6.58902087180316,3.87780264148325,0.436094052142534,0.993943903390637,0.25326102332916,0.926864265692532,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0.622422070799533,0.269421344139376,0,0,0,0,0,0,0,0.469737994575059,0.485618833104395,0.421352420106746,0.61246251376468,0.491337269247072,0.309977343527296,0,0.247266929278557,0,0,0,0.500474079487857,0.554128230968366,0.438977620880838,0,0,0,0.89694817844431,0.213557388818567,0.423863802319124,0.600182192168805,0.515262646192195,0.515281080091258,0.558350568994769,0.506328996723799,0.0974370051611986,1.26216887122057,0.184099797284599,0.161646056818812,0.710019185033229,0.403008392910561,0.339121184620975,0.193260853163297,0,0,0.121973706129595,0.397589304964456,0,0.207322110030741,0,0.36497735907583,1.56449532329816,0,0,0.464367928031979,0,0.118306800039844,0,0.964044119533928,0.330881918197182,0.217879444092406,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,1.18157981336281,1.7658523976586,0.614942192715568,0.171567810298526,0,0,0.100528972411631,0.185176890317059,0.325808305310325,0,0,0.34779121492523,0.587043471179108,0.144366447761074,0,0.190254152234598,0,0,2.21595305478658,1.40402559083543,1.18904929830983,0,0.16798212819886,0,0.268675568108545,0,0,0.985326475791887,0.704387472105808,0.414656231081544,0.576479813667846,1.00993946741104,0.63497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0.531876233169741,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.821905290201534,0.716243852959582,0.448340575974109,0.788123040807709,2.15627574859517,1.79680250791648,0.508189248444927,1.30139853857622,0,1.84267891867784,0.637938751653163,1.49801404789436,2.99161459204025,3.72973962092432,0.736148950314839,0.500170521059677,0.542530047399471,0,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0,0.347534457872331,0.391602314925481,0.343143423810856,1.03384013061444,0.431428401637234,0.960548020230999,0.606255142892519,1.66435439510497,0,0.496215615637554,0.767309866440312,0.280660094433074,0,0,0.482561763430822,1.48418066444991,0.308419387605311,0,0,0,0.116210378459959,0.241718899183244,0,0.0920809889358963,0.114814448164607,0.364182336013434,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0.254876273045038,0,0.223874754722178,0.657779629937804,1.0457418040996,0.256450125116389,0,0.325378394664303,0.618246069886334,1.28197250745681,0.990113999047056,0,0,0,0.096670718292122,0,0,0.137836572484531,0.214840489736547,0.580066775656914,0.511359764496605,0.267096106940212,0,0,0.765676274967505,0.2023155617111,0,0.31481234683064,0,0,0,0,0.37064843820784,0.4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| |||
|short_description=p3@SYNJ1 | |||
}} |
Revision as of 13:24, 21 January 2014
Short description: | p3@SYNJ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SYNJ1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000357345, ENST00000382491, ENST00000429236, NM_001160302, NM_001160306, uc002yqf.2, uc002yqg.2_5end |
EntrezGene: | SYNJ1 |
HGNC: | 11503 |
UniProt: | O43426C9JW66B9EGN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.75e-11 | 136 |
myeloid leukocyte | 1.58e-10 | 72 |
hematopoietic stem cell | 1.72e-09 | 168 |
mature alpha-beta T cell | 1.00e-08 | 18 |
alpha-beta T cell | 1.00e-08 | 18 |
immature T cell | 1.00e-08 | 18 |
mature T cell | 1.00e-08 | 18 |
immature alpha-beta T cell | 1.00e-08 | 18 |
hematopoietic oligopotent progenitor cell | 1.31e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-08 | 161 |
hematopoietic cell | 1.35e-08 | 177 |
nongranular leukocyte | 1.75e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 4.68e-08 | 120 |
monopoietic cell | 9.48e-08 | 59 |
monocyte | 9.48e-08 | 59 |
monoblast | 9.48e-08 | 59 |
promonocyte | 9.48e-08 | 59 |
macrophage dendritic cell progenitor | 3.01e-07 | 61 |
myeloid lineage restricted progenitor cell | 3.66e-07 | 66 |
granulocyte monocyte progenitor cell | 3.98e-07 | 67 |
T cell | 4.30e-07 | 25 |
pro-T cell | 4.30e-07 | 25 |
myeloid cell | 4.80e-07 | 108 |
common myeloid progenitor | 4.80e-07 | 108 |