FFCP PHASE1:Hg19::chr20:49547766..49547785,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23394 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15766 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H2P0 | |||
|association_with_transcript=-16bp_to_ENST00000396029_5end | |||
|description=CAGE_peak_5_at_ADNP_5end | |||
|id=chr20:49547766..49547785,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.45e-07;82 | |||
|ontology_enrichment_disease=DOID:0050687!3.51e-10!143;DOID:162!1.04e-08!235;DOID:14566!2.10e-08!239;DOID:305!5.41e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.23e-09,143;DOID:162,4.32e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.45e-18!94;UBERON:0001016!2.45e-18!94;UBERON:0001017!5.50e-18!82;UBERON:0005743!4.14e-17!86;UBERON:0000924!1.34e-13!173;UBERON:0006601!1.34e-13!173;UBERON:0007023!1.57e-13!115;UBERON:0000955!4.98e-13!69;UBERON:0006238!4.98e-13!69;UBERON:0004121!7.83e-13!169;UBERON:0001049!2.05e-12!57;UBERON:0005068!2.05e-12!57;UBERON:0006241!2.05e-12!57;UBERON:0007135!2.05e-12!57;UBERON:0003080!2.10e-11!42;UBERON:0002780!6.33e-11!41;UBERON:0001890!6.33e-11!41;UBERON:0006240!6.33e-11!41;UBERON:0002616!2.63e-10!59;UBERON:0001893!3.76e-09!34;UBERON:0002020!5.15e-09!34;UBERON:0003528!5.15e-09!34;UBERON:0001869!5.81e-09!32;UBERON:0002346!6.21e-09!90;UBERON:0002791!9.41e-09!33;UBERON:0000153!1.47e-08!129;UBERON:0007811!1.47e-08!129;UBERON:0003075!3.26e-08!86;UBERON:0007284!3.26e-08!86;UBERON:0000033!3.58e-08!123;UBERON:0003056!1.47e-07!61;UBERON:0000956!3.57e-07!25;UBERON:0000203!3.57e-07!25;UBERON:0001950!9.27e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.50e-09;34!UBERON:0001869;4.21e-09;32!UBERON:0003528;5.35e-09;34!UBERON:0002020;5.35e-09;34!UBERON:0002780;9.34e-09;41!UBERON:0001890;9.34e-09;41!UBERON:0002791;1.10e-08;32!UBERON:0000073;4.33e-08;53!UBERON:0002616;4.33e-08;53!UBERON:0001950;6.43e-08;20!UBERON:0000956;8.75e-08;25!UBERON:0000203;8.75e-08;25!UBERON:0002619;1.69e-07;22!UBERON:0000955;3.04e-07;68!UBERON:0001016;4.73e-07;83!UBERON:0001017;7.23e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.35e-19,89;UBERON:0001017,1.14e-18,81;UBERON:0011216,4.25e-18,223;UBERON:0007023,7.31e-16,114;UBERON:0004121,4.19e-14,171;UBERON:0000924,4.19e-14,171;UBERON:0006601,4.19e-14,171;UBERON:0000955,1.62e-13,68;UBERON:0006238,1.62e-13,68;UBERON:0001049,3.91e-13,56;UBERON:0005068,3.91e-13,56;UBERON:0006241,3.91e-13,56;UBERON:0007135,3.91e-13,56;UBERON:0000073,3.35e-12,53;UBERON:0002616,3.35e-12,53;UBERON:0002780,4.69e-12,41;UBERON:0001890,4.69e-12,41;UBERON:0003080,4.69e-12,41;UBERON:0006240,4.69e-12,41;UBERON:0001893,2.06e-10,34;UBERON:0003528,2.95e-10,34;UBERON:0002020,2.95e-10,34;UBERON:0001869,3.30e-10,32;UBERON:0002346,6.05e-10,86;UBERON:0002791,1.76e-09,32;UBERON:0003075,3.93e-09,82;UBERON:0007284,3.93e-09,82;UBERON:0003056,2.18e-08,61;UBERON:0000956,3.28e-08,25;UBERON:0000203,3.28e-08,25;UBERON:0001950,4.90e-08,20;UBERON:0002619,1.15e-07,22;UBERON:0010371,2.03e-07,104 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.704772020479856,0,0.446961094427288,1.74467704820074,0,0.631719873426831,1.30592814099919,0.737201809504527,0,1.74753097704138,1.31883489114227,1.36142988256051,1.32558950291166,0,0,1.46062018077475,0.975865597581014,0.861847406537515,1.02000345622126,0.626909442956176,1.71741592278634,2.46373965131192,1.63205431473244,1.45185470921107,1.31360943119913,0.944529375764151,0.786728553697808,0.383829398097213,0.309632246632152,0,1.50602959389125,0.739508020333575,1.00707360754392,1.56386155736164,0.587200878669695,0,1.20326668482085,0.651032612147555,1.56740831967947,1.29557466407592,0.515151135268373,0.872389432677388,0.755751887377619,1.94067248950253,0.929716147622738,1.6446715520873,0.309706370895104,0.28769239232215,0.256160706529101,0,1.03423704220986,0.645484683583826,0,1.69418105588344,0.818718450173537,0.449446968890169,0.612167784741805,0.962787081228281,1.27867425159808,0.659702600373432,0.797854630486527,1.27867425159808,0,0,0,0,0,0.434377689410233,0,0.368277635987565,0.632924774881769,0.845021145247767,0,0.419317291016752,0.112328631146495,0.600707571366025,1.12507910687956,0,0.19891667719909,0.365328307529268,0,1.09227722252426,1.77901850772711,0.853460445133014,0.400395987036012,0.574752439954483,1.32208974556972,0.954053754535364,0.569212969109448,0.587237189370939,1.91136614062614,0,2.24203425192614,1.05353633910031,0.983548850569165,1.57204305099666,1.02800749499755,0.668745981562712,0.651844533267181,0.473447805734733,1.94826728407911,0.779873198196215,1.17842362989935,0.664601683750863,1.08321545506006,1.66518715643378,1.1705341280389,0.657751618414705,1.10540007114339,1.44901542867526,0.444859689486181,1.07016331235885,0,0.339928028092699,1.91610246800961,0.34362744548263,0.253019692019503,0.637130828648193,0,0.950452044448374,0.903450714466637,0.639933055772092,0,0.947109008176067,0,1.00803371612366,1.06976078313403,1.59306844271079,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0.973269740605272,1.32348744029695,1.77383517970051,1.40535657109002,2.48860243445654,0.364295288292542,0.741568885568859,1.62273696827342,0.696518949197069,0.398873881556595,0.953962497221368,0.571994910780128,0.74291500265913,0.993812036833525,0,1.04142150482278,0,1.67799774483962,0.825354125820202,1.04497483268405,0.516833518338658,0.35576626268671,0.66944122552934,0.805658634218294,0.760272105718513,1.46437234528902,0.735326160691737,0.81014194788176,1.60739510911344,0.673588117878509,1.68917220724983,0,0,1.46561395144326,0,0,0.872188104285069,0,1.13967460498122,0.397227542439656,1.14734648299525,0.709336764396714,0,0,0,2.17847724779836,0.538842688278752,0.817309515567294,0.756787138224657,1.72852777344,1.64025002283658,1.5608003841516,1.1409436430889,0.597794722207204,2.3486899728753,1.94247533241758,0.98315564691574,0.204154171254893,1.35117749042945,1.44656093646072,1.18800285728205,1.97813543422845,2.73048408581408,0,1.17835279767846,3.503318556415,0.831192346452549,1.75591048352335,0.30648779579902,2.25357088359895,0.113432183160021,0.179389635688862,0.427114777637135,0.423863802319124,0.600182192168805,0.515262646192195,0.257640540045629,0.930584281657949,1.0126579934476,0.876933046450788,1.51460264546469,0.644349290496095,0.484938170456436,0.355009592516614,0.604512589365842,0.508681776931463,0.193260853163297,0.545492241181669,0.860413786167011,5.00092195131341,7.55419679432466,3.95059405756363,3.83545903556871,4.79409616663694,3.28479623168247,0,1.28648187638577,0,0.928735856063958,0.721879481669586,0.946454400318751,0.337169380156203,0.964044119533928,1.21323370005633,1.96091499683166,1.66089433377768,0.943819157121151,0.588664395376038,0.38474715694639,1.4763109092493,0,0,0,1.26755034821831,3.9313088667105,1.77236972004421,3.5317047953172,2.7057456479485,0.343135620597051,1.31700342490351,0,1.40740561376283,1.574003567695,1.62904152655162,0,0,0.927443239800615,1.76113041353732,0.288732895522148,0,0.951270761172991,3.95102198979638,4.29243081047436,0.492434012174795,0.234004265139238,0.297262324577456,0,0.839910640994298,0.283550194484773,2.05984602216551,0.581267877027924,0.766765358330422,5.41929561685538,1.49682337822484,2.90259361757081,3.17063897517315,2.77733353538036,0.571481048629521,2.29193055334967,1.17217447210047,0,1.02827492703324,0.300343057843917,2.28661146104463,1.34557301214433,0.87192013766656,1.24675085895615,0.258543431515556,0,0,1.32969058292435,0,0.257207374262142,1.41849132023278,0.266422179016099,0.857867961948885,1.08524321078289,2.46972101034231,0.977208552881205,0.710783897485092,0,1.20575750823834,0,0.299918973546171,0,0,0,0.479249710983165,0,1.42636905040718,0.434343920002738,1.02738161275192,0.537182889719687,0.448340575974109,1.77327684181734,1.72502059887614,1.54011643535698,8.38512259934129,11.712586847186,12.3726210044431,4.52293916402742,8.29320377149112,2.99602809578873,5.9832291840805,5.8018171881045,1.34960640891054,0.500170521059677,0.542530047399471,0.623912584592421,0.178428988797162,0.630809660135739,0.468565659970853,0.902838299183157,2.27407504055985,0,1.32845119707087,1.10621501125022,0.868836144680828,0.783204629850962,0.686286847621712,1.44737618286021,0.647142602455851,1.38745825144478,0.606255142892519,0,0.907170879989041,0.744323423456331,0.460385919864187,1.12264037773229,0.768834895534206,0.511707249066704,0.160853921143607,0,0.771048469013278,0.887808626565635,1.06765302817952,1.03850885836724,1.04589340613963,4.59265908448164,0.40101294060657,1.84161977871793,0.574072240823034,0.910455840033585,1.04899531967539,0.902399225814824,0.462092022626489,0,0,0.844413031143006,1.13733384070897,0.170093705276516,0.215915916102139,0,1.08378575017541,1.50506932156456,1.01950509218015,0,1.34324852833307,0.438519753291869,0,0.512900250232778,0.656029291399411,0.976135183992909,1.854738209659,1.83138929636687,1.73269949833235,0.574265537996172,3.90036147621913,0,2.51343867559517,1.07834031980251,1.84204409671355,0.964856007391714,1.18162269355101,1.59518363305651,1.70453254832202,0.979352392114111,0.826424576804891,2.88285101047659,0.893288987462089,2.73126008309985,0,0.94443704049192,0.6970372701606,1.23213432070436,0.532306030317022,0.869932992075073,0.37064843820784,0.429374660225974,1.116475108079,0.316379424718726,0.762520775695299,0,0.855877976067841,0.636406495851874,2.35484592059769,0.179872457583315,0.54907405947211,0.824686816419805,0.606547444719948,3.17020642346017,0,0.48763373908959,0.487426979262569,0,0.545999645631943,1.83827061539827,0,0.551365343546124,0.66343897524122,0.876901770507525,0.578775534266688,0.655894752046633,0.202910376962704,0,0.563391205064483,1.14729081763241,0.491245205065606,0.35667105148125,0,1.26664581178598,1.31717957183961,0,1.74967360122491,0.48111056362756,0.670302275535787,1.08890984861323,2.16530741786592,0,0,0.443430153536676,0.229723400206959,0,0,0,1.42939065274673,0.411362273086194,0.648473311192717,0,0,2.56377770705936,4.81239927631679,1.96032172784825,1.11481905075431,3.31819189845823,1.56512055366511,0.797131363644112,2.59453182862662,0.5745161103971,0.635020748171649,0.973865820823666,0.842391534340376,1.36940807419915,1.56679895773023,0,1.01575066680962,0.642352300414798,2.62339619348362,1.70338495076131,0.343505344755765,1.22896305723383,1.3420566473545,1.00109485027145,1.17232857241224,0.556812347790485,2.46174797895425,0.270455678475983,4.32993558397166,2.81974010175699,1.12284324244932,2.4906390476222,1.8204078262427,0.557216921387392,2.27308917445131,1.67121139316383,0.890894042497916,0,2.98244294329889,2.11004124615769,1.11308705022906,0.329607748453519,3.1668811219199,0.796991953004279,3.31540698637377,1.51159648712566,0.613612095012929,2.33861130376032,0.622079175323615,1.61763032065188,0.716084698702437,1.53471711068062,1.57829449019094,0,1.11136990144637,3.87733098438087,3.4324196319885,5.98841394003583,2.86470537193757,0.962059999958153,3.62499787717397,1.137934482855,3.55955110409873,2.12748913591143,1.72371686620732,0.874813840149763,2.2571249341328,2.65722415744152,2.05013945663194,0,3.31737779793674,3.25102380848902,3.29078095730959,0,0.975966209950223,2.6932590476329,1.36730467016401,4.6112780877612,2.96200226552248,0.869178975376065,0.31900115973192,1.55715908783166,1.06606955203727,1.02193298195737,1.09886179476517,0.831058409500782,1.80476528493745,3.52912561771931,3.02078856556517,0.948768663620925,2.06617552674492,1.05499032264014,0.163232808159148,3.1097675715467,1.51472047819464,2.98578579323551,2.29989667708682,7.94339188413713,0.889563386041866,3.21266241260907,1.04421949505455,3.30265551605317,0.802577647298789,3.27970224015475,1.45963831372533,3.13063390291344,1.94224303627274,2.36750641709634,0,6.1214552326098,0.884612114798832,3.15679180770434,1.9700756365477,1.32930774541437,1.98595173525299,1.2557316736289,1.19472429772959,1.99226682220855,1.24807205711825,0.173559738335131,3.03776431984571,1.48000651186684,5.59125338374496,1.20390222730132,0.774050650312681,1.24251839046515,0.410577285266046,2.32773639572207,4.05978182780901,1.58186518546373,1.23337732182076,2.98071917554485,2.65905343014691,2.34661659281764,3.20635281006135,2.77488893161158,1.19885765749278,1.58499458869517,3.20702469264564,5.14784993585894,0.864328787928898,1.36677789121976,2.82832841540154,1.9026588850306,1.77824838730966,2.14196257036276,2.02265412931063,1.20084057741958,2.32739144116388,3.83239764200917,0.859530882839914,1.31443677139657,1.11712960508902,2.06244381610515,2.15361907373044,1.59743200399193,0.858452096273142,1.56220020209311,2.14987111957524,0.720599767084807,8.15471646692177,3.23011047459617,2.14281231791033,2.2243169471881,0.492137407573744,1.01607998478941,0.795229689809303,2.72406812223151,2.57205037544031,3.43848591493084,3.73896304226267,0.674921674654501,0,4.31321852271975,1.67717343799633,1.89133697518076,1.78345599658994,2.00640639386872,0.717149357331379,2.30298236783334,0.714695326373367,0.662091970365432,3.81402806482125,1.08599920350743,0.864221491201268,0.653174720218818,1.19730191562487,1.06720276974141,0.851940108927109,3.5126748371239,2.4913879725274,2.65013777824443,3.36135686540031,2.24795422962573,2.9084762440336,0.704815022316672,1.28144895081234,2.04365596629566,5.38510771951354,2.48083010905975,0.790446527591777,0.487170393523584,3.19170628885091,0.544017803369474,0.7520696820681,0.919036730290385,0.983617892129413,4.86867698375726,1.77213635993397,3.17268288745104,2.253436752717,1.14681839138014,2.3295100822739,1.8628920882415,2.35192679391592,4.12435346274952,1.81978941049977,3.42558400253961,0.941063278792687,9.36669811613763,1.7390523433299,0.597019211547496,0.467426619694449,0.554805861502613,0.568209015825267,0.50313580350515,0,0.457680136793847,0.151230923763239,1.24349760466224,0.73927574994817,0.955780602982214,0.449803112163605,1.08684069813382,0.414706207840855,0.797525143673985,1.04349012362347,0.601030435988874,0.380805212168795,0.813741466409323,0.181848659202559,0.322231671127465,1.39210127963548,1.19428766609585,1.20008329398946,0,0,1.26184898228651,0.385239660814607,1.07220795687463,1.04397716786085,0.453411851024545,1.15761237161917,2.44736704506468,0.358177682162975,1.54400723580486,0.438568099157414,1.76689145945881,1.15748422962549,0.675769762612291,0.76872455576384,1.0362910251936,0.911579868532147,2.21213497842769,0.974301544196942,0.265729680626726,0.327130788511688,0.327609848846413,0.491545817507439,4.22624246717254,0.59996218756479,0.426766918776564,0.516644938982447,2.83757976783418,0.552317850755522,0.139879507719444,0,12.7894371303652,1.61737217095023,1.57265941855896,1.85656384926424,1.01839517972415,2.55089904122019,4.58562327758308,2.79322458986622,0.954013051960256,1.65609664502632,2.40171224485641,0.705351887381368,0.918736432059601,3.59683660540173,0,2.87340946302872,5.12790910601888,10.5870112413122,2.83544735103293,2.58361033010962,5.71077681036618,2.84628383652974,1.53360640352062,2.38457178078183,2.65709032145778,1.52552838186867,1.3807198521202,0.795664888465099,2.78278214892252,1.41193548092464,0.781514011233092,2.09525355585138,0.655087670040387,2.06998520703863,3.10672889244615,2.34323429584154,3.30698874401895,2.15613754659283,12.0334457984008,0,2.48105589194647,1.93458368795583,1.53314913167514,4.82131652290458,3.36283722218824,1.21393120847326,0.91064876540519,2.30626162422861,0.230467975111559,0.171488009437418,1.90315252335129,2.56513816895111,0.709163045303809,1.4460082245969,1.96232732126285,2.04250266890802,1.12108865325516,0,0.863710364874486,0.9555033757741,2.43020250200632,2.21219056425817,3.83596703714813,6.25889780289286,0,1.45051314914126,3.414369541879,1.38251932362818,0,1.06498800657509,0.937347452350735,3.38709640152743,0,0,0,0.671132590786754,1.86485443868962,0.975343399858155,0.647428837187895,1.7452677165562,3.4794432940146,3.39997695141398,1.63757624423474,3.780064728066,5.82708444810086,2.823652050974,1.20934568419972,7.69910502190035,2.31522474323834,0.655678681511872,3.29222107453066,1.71603825227734,2.35676547101626,2.94462700672418,2.0793248022896,2.113278637917,1.35941691750254,2.25561403151649,1.99819452718089,0.699588091474503,1.60698544745092,0.705789743431384,1.44434460040503,2.92134555298607,1.37618785021362,1.00337708206016,3.31320280605688,2.92363407820933,10.4724165681691,1.5870805215462,0.371995018166751,0.462175628631418,1.29787968637137,1.51399709802095,1.42045243552804,2.02717601618299,2.03977659483963,3.20660886318673,1.8378979906969,1.50424523575425,8.18409940756986,4.28742608249886,2.48750831837634,3.82702084689012,1.70587185520785,0.714193294391221,5.55464624589653,2.3588391432426,1.34558235096736,1.33659032384146,3.03175783437329,1.30630048738177,2.39563310759697,1.27968900727716,1.57788851863888,2.66128285236811,3.25613074443898,1.49418284228802,1.9307228228694,1.88632924423832,0,2.32258743947446,1.62758471326295,1.99727032255654,2.61655931668334,0 | |||
|short_description=p5@ADNP | |||
}} |
Revision as of 12:06, 21 January 2014
Short description: | p5@ADNP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ADNP_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000396029_5end |
EntrezGene: | ADNP |
HGNC: | 15766 |
UniProt: | Q9H2P0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.35e-19 | 89 |
central nervous system | 1.14e-18 | 81 |
organ system subdivision | 4.25e-18 | 223 |
adult organism | 7.31e-16 | 114 |
ectoderm-derived structure | 4.19e-14 | 171 |
ectoderm | 4.19e-14 | 171 |
presumptive ectoderm | 4.19e-14 | 171 |
brain | 1.62e-13 | 68 |
future brain | 1.62e-13 | 68 |
neural tube | 3.91e-13 | 56 |
neural rod | 3.91e-13 | 56 |
future spinal cord | 3.91e-13 | 56 |
neural keel | 3.91e-13 | 56 |
regional part of nervous system | 3.35e-12 | 53 |
regional part of brain | 3.35e-12 | 53 |
regional part of forebrain | 4.69e-12 | 41 |
forebrain | 4.69e-12 | 41 |
anterior neural tube | 4.69e-12 | 41 |
future forebrain | 4.69e-12 | 41 |
telencephalon | 2.06e-10 | 34 |
brain grey matter | 2.95e-10 | 34 |
gray matter | 2.95e-10 | 34 |
cerebral hemisphere | 3.30e-10 | 32 |
neurectoderm | 6.05e-10 | 86 |
regional part of telencephalon | 1.76e-09 | 32 |
neural plate | 3.93e-09 | 82 |
presumptive neural plate | 3.93e-09 | 82 |
pre-chordal neural plate | 2.18e-08 | 61 |
cerebral cortex | 3.28e-08 | 25 |
pallium | 3.28e-08 | 25 |
neocortex | 4.90e-08 | 20 |
regional part of cerebral cortex | 1.15e-07 | 22 |
ecto-epithelium | 2.03e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.23e-09 | 143 |
cancer | 4.32e-07 | 235 |