FFCP PHASE1:Hg19::chr20:33814480..33814506,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10893 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7172 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y5R2 | |||
|association_with_transcript=23bp_to_ENST00000246186_5end | |||
|description=CAGE_peak_1_at_MMP24_5end | |||
|id=chr20:33814480..33814506,+ | |||
|ontology_enrichment_celltype=CL:0000077!1.17e-08!19;CL:0000540!6.47e-08!6;CL:0000031!6.47e-08!6;CL:0000404!6.47e-08!6;CL:0000047!1.30e-07!8;CL:0002322!1.93e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.12e-22;5!CL:0000077;2.58e-10;19!CL:0000039;3.13e-10;7!CL:0000586;3.13e-10;7!CL:0000650;3.16e-10;2!CL:1000500;3.16e-10;2!CL:1000618;3.16e-10;2!CL:1001318;3.16e-10;2!CL:0002173;3.16e-10;2!CL:0000540;3.96e-07;6!CL:0000404;3.96e-07;6!CL:0002321;4.22e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.40e-22,5;CL:0000039,2.49e-10,7;CL:0000586,2.49e-10,7;CL:0000077,3.30e-10,19;CL:0000650,3.47e-10,2;CL:1000500,3.47e-10,2;CL:1000618,3.47e-10,2;CL:1001318,3.47e-10,2;CL:0002173,3.47e-10,2;CL:0000047,8.11e-09,8;CL:0000540,3.65e-07,6;CL:0000031,3.65e-07,6;CL:0000404,3.65e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.10e-13;3!UBERON:0009117;3.57e-07;10!UBERON:0005564;3.57e-07;10!CL:0000031;3.96e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.08e-28!94;UBERON:0001016!7.08e-28!94;UBERON:0005743!1.16e-27!86;UBERON:0001017!4.52e-26!82;UBERON:0000955!5.49e-21!69;UBERON:0006238!5.49e-21!69;UBERON:0001049!5.54e-20!57;UBERON:0005068!5.54e-20!57;UBERON:0006241!5.54e-20!57;UBERON:0007135!5.54e-20!57;UBERON:0002780!1.68e-19!41;UBERON:0001890!1.68e-19!41;UBERON:0006240!1.68e-19!41;UBERON:0003075!3.26e-19!86;UBERON:0007284!3.26e-19!86;UBERON:0003080!8.66e-19!42;UBERON:0003056!1.11e-18!61;UBERON:0002616!1.01e-17!59;UBERON:0002346!1.21e-17!90;UBERON:0001869!1.41e-17!32;UBERON:0001893!2.21e-17!34;UBERON:0002791!1.45e-16!33;UBERON:0002619!2.08e-16!22;UBERON:0002020!7.86e-16!34;UBERON:0003528!7.86e-16!34;UBERON:0001950!8.54e-15!20;UBERON:0004121!3.75e-14!169;UBERON:0000956!1.03e-13!25;UBERON:0000203!1.03e-13!25;UBERON:0000924!2.33e-13!173;UBERON:0006601!2.33e-13!173;UBERON:0000033!2.50e-13!123;UBERON:0000153!5.88e-12!129;UBERON:0007811!5.88e-12!129;UBERON:0007023!2.02e-09!115;UBERON:0000064!4.50e-07!219;UBERON:0000025!6.77e-07!194;UBERON:0000200!7.78e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.17e-10;49!UBERON:0003567;3.16e-10;2!UBERON:0003838;3.16e-10;2!UBERON:0003586;3.16e-10;2!UBERON:0005169;3.16e-10;2!UBERON:0002321;3.16e-10;2!UBERON:0005215;3.16e-10;2!UBERON:0002303;3.16e-10;2!UBERON:0002319;3.16e-10;2!UBERON:0000473;5.86e-09;8!UBERON:0002037;4.64e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,3.47e-10,2;UBERON:0003838,3.47e-10,2;UBERON:0003586,3.47e-10,2;UBERON:0005169,3.47e-10,2;UBERON:0002321,3.47e-10,2;UBERON:0005215,3.47e-10,2;UBERON:0002303,3.47e-10,2;UBERON:0002319,3.47e-10,2;UBERON:0000473,4.81e-09,8;UBERON:0001017,3.95e-07,81;UBERON:0002037,4.41e-07,6;UBERON:0006215,4.41e-07,6 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0.872338524100369,0,0,0.261185628199839,0.982935746006035,0,0,0.527533956456907,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0.37223371266318,0,0,0,0,0,0,0.201504196455281,0,0,0.272746120590835,0,4.39105342066543,2.51806559810822,1.39432731443422,1.86589899027667,3.5324919122588,1.82488679537915,0,0.643240938192885,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0,0.653638332277218,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,2.61460037580088,7.89786630338251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,2.17771144934653,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0.511707249066704,0,0,0,0,0,0,0.116210378459959,0.604297247958111,0.200506470303285,0.0920809889358963,0,0.182091168006717,0,0,0.308061348417659,0,0,0.73886140225013,0,0,0,0,2.16757150035082,9.53210570324221,0,0,0.447749509444357,0,0,0,1.96808787419823,0.650756789328606,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687743287091848,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,4.05931470284398,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98895302764489,0,0,0,0.994147647766298,0.984685914873589,0,0,0,0.19924798825107,0,0,0.409074730008619,0,0,0.0898683511473268,0,0,0,0,0,0,0.834912883456661,7.98455192004777,0,0,0,0,0,0.709163045303809,2.06846023944879,0,0.694499979733169,0,0.60298219312704,1.52581736317083,2.10100593869327,2.95547618953547,0.219385397153973,0,0,0.0769502585037971,0.683652335082007,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0,0,2.44858209304392,0,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0.17472666824203,0.51595809741485,0,0,0,0,0.0882561266915003,0.451961481561065,0,0,0.759729551470544,0,2.08412932653988,0,0.19980960958213,0,0,0.686379991447858,0,0,0,0.271808412147228,0.732219924186332,0,0,0.600420288709789,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0.803765742325096,1.78801267576404,0.83088067605837,0,0,0.789744236554321,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,1.08599920350743,0,0,0,0,0.170388021785422,0.226624183040251,0.146552233678082,0,0.258565912723101,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,0.3755727921195,0,0.110929051536852,0.372578417648301,0.968440444553616,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,0,0,1.71553273099941,1.04397716786085,0,0.926089897295336,0,0,0.926404341482917,11.8413386772502,1.41351316756705,0.578742114812744,0.506827321959218,0.512483037175893,0.690860683462397,0,0.414775308455192,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.511577485214607,0.970423302570136,0,0.436838552768056,0,0,0,0,0.318004350653419,0,1.60114149657094,0.352675943690684,0,0.642292250964595,0,0.638535436228605,0,3.02486035466062,0.96820153449905,0.322951291263702,0,0,0,0,0,0,0,0,0.150420656698515,0.40341013740704,0,0,0,0.147856086217045,0.675375846183947,0.781078098613847,0.620060389503552,0.570742291745161,1.09394961803644,0,0.496211178389294,0,0,0.535701835878287,0.336283722218824,0,0.91064876540519,0,0,0.171488009437418,0.0679697329768317,0.789273282754189,0.590969204419841,0,0,1.88538707899202,0,0,2.80705868584208,0.47775168788705,0.0714765441766563,1.42212250559454,4.06844988788438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40363678077263,0.596852325484105,0,0,0.659643100472575,1.05673990496671,0,0,0.470317296361523,0,0.235676547101626,0.392616934229891,0,0,0,0.0939839179798536,0,0,0,0.352894871715692,0,0,0,0,0,0.475940431336403,1.30905207102113,0,0,0,0.432626562123789,0.756998549010474,1.63898357945543,0.126698501011437,1.93778776509765,3.20660886318673,6.52453786697399,1.50424523575425,0.0757786982182394,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@MMP24 | |||
}} |
Revision as of 10:56, 21 January 2014
Short description: | p1@MMP24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MMP24_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000246186_5end |
EntrezGene: | MMP24 |
HGNC: | 7172 |
UniProt: | Q9Y5R2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.40e-22 | 5 |
germ line cell | 2.49e-10 | 7 |
germ cell | 2.49e-10 | 7 |
mesothelial cell | 3.30e-10 | 19 |
mesangial cell | 3.47e-10 | 2 |
kidney interstitial cell | 3.47e-10 | 2 |
juxtaglomerular complex cell | 3.47e-10 | 2 |
renal interstitial pericyte | 3.47e-10 | 2 |
extraglomerular mesangial cell | 3.47e-10 | 2 |
neuronal stem cell | 8.11e-09 | 8 |
neuron | 3.65e-07 | 6 |
neuroblast | 3.65e-07 | 6 |
electrically signaling cell | 3.65e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 3.47e-10 | 2 |
abdominal segment connective tissue | 3.47e-10 | 2 |
trunk connective tissue | 3.47e-10 | 2 |
interstitial tissue | 3.47e-10 | 2 |
extraglomerular mesangium | 3.47e-10 | 2 |
kidney interstitium | 3.47e-10 | 2 |
juxtaglomerular apparatus | 3.47e-10 | 2 |
mesangium | 3.47e-10 | 2 |
testis | 4.81e-09 | 8 |
central nervous system | 3.95e-07 | 81 |
cerebellum | 4.41e-07 | 6 |
rhombic lip | 4.41e-07 | 6 |