FFCP PHASE1:Hg19::chr2:237146889..237146895,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2239 | |||
|description=CAGE_peak_at_chr2:237146889..237146895,- | |||
|id=chr2:237146889..237146895,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!2.03e-86!8;UBERON:0003076!7.58e-60!15;UBERON:0003057!7.58e-60!15;UBERON:0004733!1.34e-57!12;UBERON:0002028!1.34e-57!12;UBERON:0007277!1.34e-57!12;UBERON:0004732!3.75e-53!13;UBERON:0001049!1.79e-46!57;UBERON:0005068!1.79e-46!57;UBERON:0006241!1.79e-46!57;UBERON:0007135!1.79e-46!57;UBERON:0006331!8.03e-44!3;UBERON:0000988!1.07e-43!3;UBERON:0001896!4.55e-43!3;UBERON:0005290!4.55e-43!3;UBERON:0010096!4.55e-43!3;UBERON:0002616!1.30e-38!59;UBERON:0000955!1.84e-32!69;UBERON:0006238!1.84e-32!69;UBERON:0001017!9.37e-32!82;UBERON:0003075!1.28e-30!86;UBERON:0007284!1.28e-30!86;UBERON:0005743!2.93e-30!86;UBERON:0002148!4.49e-30!2;UBERON:0009662!4.49e-30!2;UBERON:0001897!1.44e-29!2;UBERON:0002346!3.18e-29!90;UBERON:0000073!2.40e-27!94;UBERON:0001016!2.40e-27!94;UBERON:0002680!7.63e-26!9;UBERON:0001895!7.63e-26!9;UBERON:0010092!7.63e-26!9;UBERON:0002308!9.85e-26!9;UBERON:0000125!9.85e-26!9;UBERON:0007023!7.03e-23!115;UBERON:0000033!6.30e-18!123;UBERON:0000153!4.76e-17!129;UBERON:0007811!4.76e-17!129;UBERON:0002038!1.34e-15!1;UBERON:0009661!1.34e-15!1;UBERON:0002902!2.38e-15!1;UBERON:0009899!2.38e-15!1;UBERON:0002581!3.66e-15!1;UBERON:0004121!7.08e-15!169;UBERON:0000924!1.65e-14!173;UBERON:0006601!1.65e-14!173;UBERON:0002020!2.43e-14!34;UBERON:0003528!2.43e-14!34;UBERON:0000025!5.80e-13!194;UBERON:0002780!7.67e-12!41;UBERON:0001890!7.67e-12!41;UBERON:0006240!7.67e-12!41;UBERON:0003080!1.47e-11!42;UBERON:0004111!3.58e-10!241;UBERON:0001894!3.73e-09!7;UBERON:0006222!3.73e-09!7;UBERON:0009663!5.16e-09!7;UBERON:0002950!1.86e-08!2;UBERON:0001891!1.86e-08!2;UBERON:0009616!1.86e-08!2;UBERON:0000477!2.40e-08!286;UBERON:0001875!2.67e-08!2;UBERON:0006514!2.67e-08!2;UBERON:0003056!6.29e-08!61;UBERON:0000483!1.30e-07!309;UBERON:0000119!1.59e-07!312;UBERON:0002420!3.34e-07!9;UBERON:0007245!3.34e-07!9;UBERON:0010009!3.34e-07!9;UBERON:0010011!3.34e-07!9;UBERON:0000454!3.34e-07!9;UBERON:0002791!7.26e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002148;3.29e-195;2!UBERON:0006331;3.29e-195;2!UBERON:0009662;3.29e-195;2!UBERON:0000988;8.98e-131;3!UBERON:0002298;2.83e-66;6!UBERON:0002680;9.75e-45;9!UBERON:0000125;9.75e-45;9!UBERON:0002308;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0004733;5.97e-34;12!UBERON:0002028;5.97e-34;12!UBERON:0004732;1.86e-31;13!UBERON:0003528;1.58e-09;34!UBERON:0002020;1.58e-09;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002148,3.29e-195,2;UBERON:0006331,3.29e-195,2;UBERON:0009662,3.29e-195,2;UBERON:0000988,8.98e-131,3;UBERON:0002298,2.83e-66,6;UBERON:0002680,9.75e-45,9;UBERON:0000125,9.75e-45,9;UBERON:0002308,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0003528,1.42e-12,34;UBERON:0002020,1.42e-12,34;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442317039724898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.443716206147409,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:237146889..237146895,- | |||
}} |
Revision as of 09:22, 21 January 2014
Short description: | p@chr2:237146889..237146895, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:237146889..237146895, - |
Coexpression cluster: | C2239_locus_pons_medulla_gastrointestinal_thalamus_globus_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
locus ceruleus | 3.29e-195 | 2 |
brainstem nucleus | 3.29e-195 | 2 |
hindbrain nucleus | 3.29e-195 | 2 |
pons | 8.98e-131 | 3 |
brainstem | 2.83e-66 | 6 |
regional part of metencephalon | 9.75e-45 | 9 |
neural nucleus | 9.75e-45 | 9 |
nucleus of brain | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
brain grey matter | 1.42e-12 | 34 |
gray matter | 1.42e-12 | 34 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |