FFCP PHASE1:Hg19::chr2:218714903..218714928,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:218714903..218714928,- | |||
|id=chr2:218714903..218714928,- | |||
|ontology_enrichment_celltype=CL:0000222!4.14e-28!119;CL:0000220!3.67e-23!246;CL:0002321!1.37e-22!248;CL:0000213!1.36e-20!57;CL:0000215!1.36e-20!57;CL:0002139!1.62e-20!24;CL:0000115!2.37e-18!35;CL:0002078!2.21e-17!44;CL:0000071!3.64e-16!18;CL:0002546!3.64e-16!18;CL:0000055!4.68e-13!180;CL:0000076!5.78e-12!62;CL:1000413!2.35e-09!9;CL:0000183!9.53e-09!59;CL:0000680!1.76e-08!57;CL:0000056!1.76e-08!57;CL:0000355!1.76e-08!57;CL:0000187!1.17e-07!54;CL:0000066!1.31e-07!254;CL:0000393!4.73e-07!60;CL:0000211!4.73e-07!60;CL:0000144!7.62e-07!625;CL:0002543!8.75e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.58e-40;24!CL:0000115;6.38e-32;36!CL:0000071;5.57e-31;18!CL:0002078;2.94e-21;45!CL:1000413;1.24e-18;9!CL:0000213;5.62e-17;58!CL:0000215;5.62e-17;58!CL:0002543;5.56e-13;6!CL:0002544;8.79e-13;6!CL:0002138;4.83e-11;6!CL:0000128;7.17e-10;7!CL:0000126;7.17e-10;7!CL:0000127;7.17e-10;7!CL:0000243;1.21e-09;15!CL:0000125;1.21e-09;15!CL:0000076;1.49e-08;63!CL:0000095;2.20e-08;17!CL:0002577;1.67e-07;3!CL:0002319;1.78e-07;25!CL:0002618;2.81e-07;3!CL:0002603;3.69e-07;3!CL:0002586;6.61e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.47e-40,24;CL:0000115,2.42e-37,36;CL:0002078,3.23e-32,45;CL:0000071,5.84e-31,18;CL:0002546,5.84e-31,18;CL:0000213,2.66e-28,58;CL:0000215,2.66e-28,58;CL:0000222,1.27e-22,121;CL:1000413,1.31e-18,9;CL:0002321,9.58e-18,250;CL:0002543,5.33e-13,6;CL:0000076,8.88e-13,63;CL:0002544,9.31e-13,6;CL:0005020,4.28e-11,6;CL:0002138,4.28e-11,6;CL:0005022,4.28e-11,6;CL:0000066,6.18e-10,253;CL:0000128,6.50e-10,7;CL:0000126,6.50e-10,7;CL:0000127,6.50e-10,7;CL:0002453,6.50e-10,7;CL:0000243,1.07e-09,15;CL:0000125,1.07e-09,15;CL:0000030,1.07e-09,15;CL:0000339,1.07e-09,15;CL:0000095,1.97e-08,17;CL:0000123,1.97e-08,17;CL:0002577,1.70e-07,3;CL:0002319,1.82e-07,25;CL:0002618,2.82e-07,3;CL:0002603,3.67e-07,3;CL:0002586,6.77e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;5.57e-31;18!CL:0005022;4.83e-11;6!CL:0000339;1.21e-09;15!CL:0000222;1.53e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.48e-23!79;UBERON:0007798!1.48e-23!79;UBERON:0000055!1.29e-20!69;UBERON:0004872!1.14e-17!84;UBERON:0004535!1.46e-17!110;UBERON:0001009!1.60e-17!113;UBERON:0001981!1.78e-17!60;UBERON:0007500!1.78e-17!60;UBERON:0004537!1.78e-17!60;UBERON:0006965!1.78e-17!60;UBERON:0001986!3.64e-16!18;UBERON:0004638!3.64e-16!18;UBERON:0004852!3.64e-16!18;UBERON:0003914!2.50e-13!118;UBERON:0000487!4.08e-13!22;UBERON:0006914!4.92e-13!25;UBERON:0000119!7.73e-13!312;UBERON:0000490!8.57e-13!138;UBERON:0001637!4.96e-12!42;UBERON:0003509!4.96e-12!42;UBERON:0004572!4.96e-12!42;UBERON:0000483!1.04e-11!309;UBERON:0004573!1.05e-09!33;UBERON:0004571!1.05e-09!33;UBERON:0003915!2.35e-09!9;UBERON:0004700!2.35e-09!9;UBERON:0001917!2.35e-09!9;UBERON:0000914!2.00e-08!83;UBERON:0002329!2.00e-08!83;UBERON:0003077!2.00e-08!83;UBERON:0003059!2.00e-08!83;UBERON:0007282!2.00e-08!83;UBERON:0009618!2.00e-08!83;UBERON:0007285!2.00e-08!83;UBERON:0004290!2.85e-08!70;UBERON:0001134!3.10e-08!61;UBERON:0002036!3.10e-08!61;UBERON:0003082!3.10e-08!61;UBERON:0002385!4.40e-08!63;UBERON:0001015!4.40e-08!63;UBERON:0000383!4.40e-08!63;UBERON:0000486!7.02e-08!82;UBERON:0000947!2.63e-07!21;UBERON:0010191!2.63e-07!21;UBERON:0000467!4.24e-07!625;UBERON:0000480!5.43e-07!626;UBERON:0007625!8.15e-07!11;UBERON:0000477!8.28e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.57e-31;18!UBERON:0001986;5.57e-31;18!UBERON:0004852;5.57e-31;18!UBERON:0000487;2.47e-24;22!UBERON:0006914;9.32e-21;25!UBERON:0003915;1.24e-18;9!UBERON:0004700;1.24e-18;9!UBERON:0001917;1.24e-18;9!UBERON:0000490;3.54e-18;33!UBERON:0000055;6.68e-14;65!UBERON:0007500;9.84e-13;56!UBERON:0001981;9.84e-13;56!UBERON:0004537;9.84e-13;56!UBERON:0002049;2.83e-12;75!UBERON:0007798;2.83e-12;75!UBERON:0001638;6.77e-11;9!UBERON:0003920;6.77e-11;9!UBERON:0004582;6.77e-11;9!UBERON:0007625;5.03e-10;11!UBERON:0001637;4.92e-09;42!UBERON:0003509;4.92e-09;42!UBERON:0004572;4.92e-09;42!UBERON:0003914;2.78e-08;74!UBERON:0001473;4.62e-08;8!UBERON:0004536;4.62e-08;8!UBERON:0006558;4.62e-08;8!UBERON:0000488;6.28e-08;4!UBERON:0002066;6.01e-07;5!UBERON:0001781;6.61e-07;3!UBERON:0001782;6.61e-07;3!UBERON:0004535;9.66e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.84e-31,18;UBERON:0001986,5.84e-31,18;UBERON:0004852,5.84e-31,18;UBERON:0002049,6.37e-25,78;UBERON:0007798,6.37e-25,78;UBERON:0000487,2.57e-24,22;UBERON:0000055,3.07e-23,68;UBERON:0006914,9.62e-21,25;UBERON:0003915,1.31e-18,9;UBERON:0004700,1.31e-18,9;UBERON:0001917,1.31e-18,9;UBERON:0007500,6.29e-18,59;UBERON:0001981,6.29e-18,59;UBERON:0004537,6.29e-18,59;UBERON:0006965,6.29e-18,59;UBERON:0004535,8.66e-18,109;UBERON:0001009,5.36e-17,112;UBERON:0004872,3.75e-16,83;UBERON:0003914,5.90e-11,117;UBERON:0001638,6.62e-11,9;UBERON:0003920,6.62e-11,9;UBERON:0004582,6.62e-11,9;UBERON:0000119,3.60e-10,309;UBERON:0007625,5.22e-10,11;UBERON:0001637,5.73e-10,42;UBERON:0003509,5.73e-10,42;UBERON:0004572,5.73e-10,42;UBERON:0000490,9.81e-09,148;UBERON:0000483,1.07e-08,306;UBERON:0001473,4.23e-08,8;UBERON:0004536,4.23e-08,8;UBERON:0006558,4.23e-08,8;UBERON:0000488,6.48e-08,4;UBERON:0004111,3.67e-07,240;UBERON:0000025,4.76e-07,192;UBERON:0002066,6.08e-07,5;UBERON:0001782,6.77e-07,3;UBERON:0005424,6.77e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.982935746006035,0.697801167972428,9.17453762946723,8.70431028153897,0.990130823680373,0.662794751455832,0.672325146451775,0.602694528023977,0,0,11.6965005172949,9.79203317972414,4.07491137921514,1.43117993565528,4.65373045247806,3.89182182743889,0,0,0,0,0,0,0,1.50602959389125,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0,0.411167888021826,0,0,0,0.709446689665756,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0,0.434377689410233,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0.434539556882471,0,0.486634870302636,3.59232305223458,3.54767035940102,2.3715392137144,0.130979075497713,0,0,0,0,0,0,0,0,10.5344075904354,6.881876760849,9.02565304179745,17.5245461996443,14.2629808311368,11.2798397195428,16.510602356408,5.68516870172524,3.5576626268671,3.01248551488203,4.43112248820062,2.28081631715554,0.488124115096339,8.08858776760911,5.67099363517232,7.41187744757862,10.7774098860562,10.472867684949,9.19899824795299,17.0867818722263,8.97688545258996,0,0,0.436094052142534,0.993943903390637,1.77282716330412,0.529636723252875,1.43418310374407,1.06400514659507,2.80338800071154,0,0,1.24484414159907,0.134710672069688,0.817309515567294,0.908144565869588,0.576175924479999,0,0,3.4228309292667,0,0.352303495931295,0.323745888736263,0.140450806702248,0,0,0,0,0,0.910161361938026,0,0.168336113954066,0,0,0,0,0,0,2.51145489964407,0,0,1.20036438433761,0.206105058476878,0,0,2.53164498361899,0.487185025805993,0.504867548488229,0,0,0.710019185033229,0.201504196455281,0.339121184620975,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,1.4763109092493,0,0.8231480226628,0,0,0,0,0,0.737930631258681,3.25978839567199,0.329250856225877,0,0.201057944823262,0.648119116109707,0.325808305310325,0,1.44331342025273,0.34779121492523,0.587043471179108,3.75352764178792,3.70388410061289,1.52203321787679,0,0,0,0,0,0.93733833986777,0.335964256397719,0.850650583454319,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,5.49442313292267,3.48768055066624,4.400297149257,0,0,0,0,0,0.257207374262142,0,0.799266537048298,0,0,0.823240336780769,0,0,0,0.904318131178758,0,0.499864955910285,0,0,0,1.19812427745791,0,8.5582143024431,0.144781306667579,0.821905290201534,0.716243852959582,0,0,0,0,1.52456774533478,0,0,1.00509759200609,0.637938751653163,0,0,0,0.36807447515742,0,0,0,0,0.157702415033935,0,0.300946099727719,0,2.0694614258501,1.32845119707087,2.02806085395873,0,0,1.71571711905428,0,0,0,8.48757200049526,19.9722527412596,27.8199069863306,0.248107807818777,0.767309866440312,0.280660094433074,0.384417447767103,0,0.321707842287215,0,0.154209693802656,0,0.0821271560138091,0,0.697262270759755,1.32945394550784,0,0,0,0,0,0,0,0.784349769176855,0,0,7.96133688496276,7.31402932689017,2.37507507712353,3.08454505380579,0.270946437543853,0.501689773854853,0,0,1.34324852833307,0,0,5.89835287767695,6.23227826829441,5.20605431462885,0,0,0,1.72279661398852,1.30012049207304,0,0.580024309752732,0.154048617114644,1.07452572308291,1.7918754422989,0.429680979473094,0.435050081742686,2.13066568540252,0.712256285173899,0,0,0.127612712494584,0,0,0.31481234683064,0.6970372701606,0.616067160352178,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0.632758849437452,0,0.767693373934002,0,1.90921948755562,0,0.179872457583315,0,0.471249609382746,0.606547444719948,1.58510321173008,0.421258456238981,2.43816869544795,0.243713489631284,0,0,0,1.13008116620243,2.2054613741845,0.66343897524122,1.75380354101505,0,0,0.202910376962704,1.54911749049875,0.281695602532241,2.29458163526482,0.88424136911809,0,0.354761064070598,0.844430541190656,0.658589785919804,0,0.349934720244983,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67496561096205,0,0,0.19924798825107,0,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,2.3948309234694,3.33410970433911,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0.341826167541004,0,0,0,0,0,0,0,0,0,0.225595660617181,0.392125068635479,0,0,0,0,0.326465616318295,1.41353071433941,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0,0.505492637027904,0,0,0.664653872707185,0,0,1.19472429772959,0,0.138674673013139,0,0.195984794828755,0.870592065804026,0,0,0,0,0,0.193978032976839,0,0,3.97421581475578,2.18586072873289,0,0,0.64127056201227,0.213452994739353,0.999048047910651,0,0,0,0,3.47907099583211,0,4.21303038828204,2.824276850433,0,0.288950589901519,0,0,0,1.71906176567983,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.470284307407084,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0.662091970365432,0,1.62899880526114,0.864221491201268,2.28611152076586,0,0,0,0.679872549120754,0,0,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0.298509605773748,0,0,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0,0.591420599958536,0.318593534327405,0,0.310525913752519,0.414706207840855,0,0.521745061811734,0.150257608997218,0.380805212168795,1.22061219961398,0,0.537052785212442,0,0,2.80019435264208,0,0,1.26184898228651,0,0.428883182749851,0.260994291965212,0,2.08370226891451,0.489473409012935,1.07453304648892,1.85280868296583,1.31570429747224,13.2516859459411,0.38582807654183,0.675769762612291,0.256241518587947,0.690860683462397,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0.636008701306837,0,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0,0,0,0,0,1.65085738669511,0.115525666150338,0,8.28431911272121,0,0.0752103283492573,0.80682027481408,0,0,11.1364903906866,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,1.71488009437418,0.135939465953663,0,0.236387681767936,0.333694205676207,0.078493092850514,0,0,0,0.431855182437243,0,0.500335809236594,0,0,0.173858272302579,0,0.207216164163037,0.3414369541879,0,0,4.02328802483922,3.57896299988462,0,0,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0.245148321753905,0,0.196308467114945,0.297046400327086,1.6906229103336,0.509781344063451,0.187967835959707,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0.371995018166751,0.462175628631418,0.865253124247578,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0.186224142887574,6.39151616709497,0,0,0,0.684466602170562,0,0.0717222053926763,0.665320713092027,0,0.106727345877715,1.9307228228694,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr2:218714903..218714928,- | |||
}} |
Revision as of 08:34, 21 January 2014
Short description: | p@chr2:218714903..218714928, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:218714903..218714928, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data