FFCP PHASE1:Hg19::chr2:165698521..165698604,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22837 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23571 | |||
|TSSclassifier=strong | |||
|UniProt=Q53SF7 | |||
|association_with_transcript=0bp_to_ENST00000392717,ENST00000409184_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_3_at_COBLL1_5end | |||
|id=chr2:165698521..165698604,- | |||
|ontology_enrichment_celltype=CL:0000066!3.93e-13!254 | |||
|ontology_enrichment_celltype_v019=CL:1000507;4.83e-08;10!CL:1000494;4.83e-08;10!CL:1000497;5.58e-08;17!CL:0002518;5.58e-08;17!CL:1000449;1.04e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.08e-09,253;CL:1000507,6.07e-08,10;CL:1000494,6.07e-08,10;CL:1000497,9.36e-08,17;CL:0002518,9.36e-08,17;CL:1000449,2.01e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.10e-07!106;DOID:0050687!4.29e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003886!4.66e-11!63;UBERON:0002553!3.37e-10!70;UBERON:0000468!1.01e-09!659;UBERON:0000064!1.03e-09!219;UBERON:0000464!9.73e-09!104;UBERON:0004111!3.78e-08!241;UBERON:0000475!7.18e-08!365;UBERON:0000489!7.45e-08!32;UBERON:0003064!1.09e-07!37;UBERON:0000466!1.20e-07!126;UBERON:0004876!1.30e-07!20;UBERON:0000062!1.65e-07!511;UBERON:0001008!2.18e-07!45;UBERON:0000477!2.67e-07!286;UBERON:0000467!3.89e-07!625;UBERON:0006554!4.05e-07!44;UBERON:0009569!4.19e-07!113;UBERON:0002113!4.87e-07!27;UBERON:0003918!4.87e-07!27;UBERON:0005095!4.87e-07!27;UBERON:0007687!4.87e-07!27;UBERON:0000481!5.75e-07!347;UBERON:0000480!6.12e-07!626;UBERON:0007023!7.30e-07!115;UBERON:0000080!8.17e-07!18;UBERON:0002120!8.17e-07!18;UBERON:0004875!8.17e-07!18;UBERON:0005721!8.17e-07!18;UBERON:0005754!8.17e-07!18;UBERON:0007297!8.17e-07!18;UBERON:0000058!9.05e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;1.06e-08;29!UBERON:0002113;4.75e-08;24!UBERON:0011143;4.75e-08;24!UBERON:0004211;4.83e-08;10!UBERON:0009773;4.83e-08;10!UBERON:0001231;4.83e-08;10!UBERON:0004810;4.83e-08;10!UBERON:0006554;5.45e-08;30!UBERON:0001008;5.45e-08;30!UBERON:0006555;1.04e-07;15!UBERON:0004819;1.04e-07;15!UBERON:0001285;1.04e-07;15!UBERON:0007684;1.04e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,5.98e-10,31;UBERON:0002113,3.86e-09,26;UBERON:0003918,3.86e-09,26;UBERON:0011143,3.86e-09,26;UBERON:0005095,3.86e-09,26;UBERON:0007687,3.86e-09,26;UBERON:0001008,9.29e-09,48;UBERON:0006554,1.92e-08,47;UBERON:0006555,4.41e-08,16;UBERON:0004819,4.41e-08,16;UBERON:0004810,6.07e-08,10;UBERON:0003886,8.56e-08,54;UBERON:0002417,1.95e-07,60;UBERON:0000916,1.95e-07,60;UBERON:0004211,2.01e-07,15;UBERON:0009773,2.01e-07,15;UBERON:0001231,2.01e-07,15;UBERON:0001285,2.01e-07,15;UBERON:0007684,2.01e-07,15;UBERON:0004208,2.01e-07,15;UBERON:0009569,2.21e-07,112;UBERON:0002553,6.53e-07,61 | |||
|phase1_expression=1.81678379270557,2.35510576280081,6.06103937612676,2.00146596706261,4.46961094427288,4.36169262050184,2.53299878168311,0,0.783556884599516,2.94880723801811,2.09340350391728,2.18441372130172,0.263766978228454,0.123766352960047,0.331397375727916,0.672325146451775,2.41077811209591,2.19093027116212,0.975865597581014,0.123121058076788,0.408001382488506,0.313454721478088,2.0036519099174,0.958120975510189,1.25542639594803,0,0,0,0,0,0,0.919421224478927,1.204823675113,0.739508020333575,0.154934401160603,0.568676929949686,1.17440175733939,0,0,0,2.46307021663917,1.29557466407592,2.06060454107349,0,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0.612167784741805,0.641858054152187,1.27867425159808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27988733383968,1.09227722252426,0.889509253863555,2.98711155796555,2.00197993518006,1.14950487990897,2.64417949113945,1.90810750907073,4.55370375287559,2.34894875748376,2.6759125968766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,0.722878304769133,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0.221729397462564,0.43917392846563,7.98972360536047,1.09288586487763,0,0,0.174129737299267,0,0.715471872916026,0.571994910780128,0.74291500265913,0.596287222100115,0.860234595106124,0,1.69592382577203,0.838998872419812,2.47606237746061,0.626984899610432,0.775250277507987,1.77883131343355,1.67360306382335,1.20848795132744,0.760272105718513,2.68468263302986,1.47065232138347,0,4.46498641420399,5.16417557040191,5.0675166217495,0,0,0.916008719652036,0,0,0.436094052142534,7.45457927542978,0.886413581652058,1.85372853138506,1.43418310374407,0,0.560677600142307,0,0.98667019366864,0.622422070799533,0.67355336034844,0.163461903113459,0.454072282934794,1.15235184896,0.468642863667593,0.312160076830321,0,0.149448680551801,0.352303495931295,0.161872944368132,0.561803226808994,0.61246251376468,0.982674538494144,0.309977343527296,0,0.494533858557114,0,0,0.336672227908132,0.375355559615893,1.10825646193673,0,0.30648779579902,0.45071417671979,0.226864366320042,1.25572744982203,1.49490172172997,0.635795703478686,1.20036438433761,0.412210116953756,1.54584324027377,1.67505170698431,0.675105328965065,0.584622030967192,0.504867548488229,0.184099797284599,2.90962902273861,0.710019185033229,0.806016785821122,0.508681776931463,2.12586938479627,2.18196896472668,4.58887352622406,1.09776335516636,0.927708378250397,1.2781333715647,2.38420426535352,1.26160425437814,0.72995471815166,0,3.85944562915731,1.38134921352481,0,0.721879481669586,1.18306800039844,0.674338760312407,1.68707720918437,1.32352767278873,1.30727666455444,0.71181185733329,0.674156540800822,0.98110732562673,0.769494313892781,0,0,0,0,0,0,1.18157981336281,0,7.37930631258681,0.857839051492628,1.42675371031213,0,1.70899253099772,2.40729957412177,0,1.03993478527958,0,0.231860809950154,4.57893907519705,2.30986316417718,0.925971025153221,2.09279567458058,0.790204397959275,1.71697232418975,0.246217006087397,0.468008530278475,0,1.87467667973554,1.84780341018745,1.41775097242386,1.52249488594842,1.16253575405585,1.15014803749563,1.97065295158377,0.264145302039678,1.86595303986695,3.02651902175619,1.76739406796932,0.507983154337352,0,0,0,1.43958489784653,0.600686115687835,1.42913216315289,0.560655421726804,0.43596006883328,0.66004457238855,3.87815147273333,0,0,2.39344304926383,1.04007436911366,0,0,0.266422179016099,1.14382394926518,0,0.823240336780769,0.65147236858747,0.355391948742546,0,0.904318131178758,0.871533458600294,1.89948683245908,0,0.502257091432126,2.10833939483032,0.718874566474748,3.44585807502342,0,0.289562613335158,0,0.716243852959582,0,0,0,0,2.54094624222463,2.60279707715243,0,0.167516265334349,1.27587750330633,0,0,0,0.49076596687656,0,0,4.99130067673937,2.67643483195743,5.83498935625558,5.50564650465752,0.902838299183157,2.27407504055985,1.03473071292505,0,0.184369168541703,1.39013783148933,0,0,0,0.215714200818617,0.106727557803444,0.909382714338778,1.66435439510497,1.5119514666484,6.4508030032882,2.76231551918512,2.52594084989766,6.79137491055215,5.62877973973374,4.82561763430822,2.96836132889982,0.616838775210622,0.177561725313127,0.328508624055237,0.519254429183621,0.697262270759755,5.55953468121462,2.20557117333613,3.22283461275637,0.574072240823034,0.182091168006717,1.70461739447251,5.86559496779635,11.7833465769755,7.0591479225917,4.38417673959782,7.59971728028705,1.13733384070897,0.340187410553031,1.51141141271498,6.16909010761157,3.52230368807009,4.51520796469368,12.2340611061618,14.959368160717,6.04461837749881,0.219259876645935,0,1.28225062558195,0.328014645699706,1.30151357865721,80.9902351551097,0,0.165018999841176,1.72279661398852,1.95018073810956,3.21367859688319,0.096670718292122,0.462145851343933,0.15350367472613,0.137836572484531,0.214840489736547,0,0.426133137080504,0.267096106940212,3.8015530533025,5.38132188622297,6.25302291223462,3.94515345336645,0.464845549297286,1.5740617341532,0.6970372701606,1.84820148105653,1.06461206063404,0,0.18532421910392,0.5724995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| |||
|short_description=p3@COBLL1 | |||
}} |
Revision as of 06:23, 21 January 2014
Short description: | p3@COBLL1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COBLL1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000392717, ENST00000409184_5end |
EntrezGene: | COBLL1 |
HGNC: | 23571 |
UniProt: | Q53SF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.08e-09 | 253 |
kidney tubule cell | 6.07e-08 | 10 |
nephron tubule epithelial cell | 6.07e-08 | 10 |
kidney cell | 9.36e-08 | 17 |
kidney epithelial cell | 9.36e-08 | 17 |
epithelial cell of nephron | 2.01e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 5.98e-10 | 31 |
kidney | 3.86e-09 | 26 |
kidney mesenchyme | 3.86e-09 | 26 |
upper urinary tract | 3.86e-09 | 26 |
kidney rudiment | 3.86e-09 | 26 |
kidney field | 3.86e-09 | 26 |
renal system | 9.29e-09 | 48 |
urinary system structure | 1.92e-08 | 47 |
excretory tube | 4.41e-08 | 16 |
kidney epithelium | 4.41e-08 | 16 |
nephron tubule epithelium | 6.07e-08 | 10 |
body cavity precursor | 8.56e-08 | 54 |
abdominal segment of trunk | 1.95e-07 | 60 |
abdomen | 1.95e-07 | 60 |
nephron epithelium | 2.01e-07 | 15 |
renal tubule | 2.01e-07 | 15 |
nephron tubule | 2.01e-07 | 15 |
nephron | 2.01e-07 | 15 |
uriniferous tubule | 2.01e-07 | 15 |
nephrogenic mesenchyme | 2.01e-07 | 15 |
subdivision of trunk | 2.21e-07 | 112 |
anatomical cavity | 6.53e-07 | 61 |