FFCP PHASE1:Hg19::chr2:136343943..136343952,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23518 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9757 | |||
|TSSclassifier=strong | |||
|UniProt=C9JIX1 | |||
|association_with_transcript=21bp_to_ENST00000436436,uc002tup.2,uc010fni.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_R3HDM1_5end | |||
|id=chr2:136343943..136343952,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.53e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.24e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.08e-13;82!UBERON:0006222;6.57e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!8.12e-72!20;UBERON:0002619!8.47e-72!22;UBERON:0002780!1.22e-71!41;UBERON:0001890!1.22e-71!41;UBERON:0006240!1.22e-71!41;UBERON:0001017!1.79e-71!82;UBERON:0001893!4.00e-70!34;UBERON:0003080!8.44e-70!42;UBERON:0001869!3.62e-69!32;UBERON:0005743!8.70e-68!86;UBERON:0002791!1.61e-66!33;UBERON:0001049!7.33e-65!57;UBERON:0005068!7.33e-65!57;UBERON:0006241!7.33e-65!57;UBERON:0007135!7.33e-65!57;UBERON:0002020!2.47e-64!34;UBERON:0003528!2.47e-64!34;UBERON:0000956!7.22e-63!25;UBERON:0000203!7.22e-63!25;UBERON:0002616!2.01e-62!59;UBERON:0000955!3.05e-62!69;UBERON:0006238!3.05e-62!69;UBERON:0000073!1.33e-60!94;UBERON:0001016!1.33e-60!94;UBERON:0002346!2.39e-46!90;UBERON:0003056!4.13e-46!61;UBERON:0003075!5.04e-46!86;UBERON:0007284!5.04e-46!86;UBERON:0000033!1.01e-33!123;UBERON:0007023!1.30e-32!115;UBERON:0000153!9.10e-32!129;UBERON:0007811!9.10e-32!129;UBERON:0000924!9.74e-31!173;UBERON:0006601!9.74e-31!173;UBERON:0004121!5.79e-30!169;UBERON:0000200!5.27e-24!6;UBERON:0001871!6.57e-24!7;UBERON:0002021!4.78e-20!5;UBERON:0001872!9.96e-20!5;UBERON:0000025!1.39e-13!194;UBERON:0002771!6.89e-13!3;UBERON:0000349!1.06e-12!5;UBERON:0002420!2.03e-10!9;UBERON:0007245!2.03e-10!9;UBERON:0010009!2.03e-10!9;UBERON:0010011!2.03e-10!9;UBERON:0000454!2.03e-10!9;UBERON:0004111!1.91e-09!241;UBERON:0001870!2.26e-09!2;UBERON:0000369!6.09e-09!4;UBERON:0002435!6.09e-09!4;UBERON:0000204!6.09e-09!4;UBERON:0010082!6.09e-09!4;UBERON:0001876!6.09e-09!2;UBERON:0001897!2.51e-08!2;UBERON:0002360!2.81e-08!2;UBERON:0000094!2.81e-08!2;UBERON:0007645!2.81e-08!2;UBERON:0000064!8.18e-08!219;UBERON:0000483!1.32e-07!309;UBERON:0000477!1.70e-07!286;UBERON:0000119!1.86e-07!312;UBERON:0002298!3.47e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.08e-110;22!UBERON:0001950;1.88e-110;20!UBERON:0000956;1.99e-97;25!UBERON:0000203;1.99e-97;25!UBERON:0001869;1.73e-81;32!UBERON:0001893;1.57e-74;34!UBERON:0002791;1.61e-73;32!UBERON:0003528;3.65e-68;34!UBERON:0002020;3.65e-68;34!UBERON:0002780;1.88e-57;41!UBERON:0001890;1.88e-57;41!UBERON:0000073;2.35e-36;53!UBERON:0002616;2.35e-36;53!UBERON:0000200;3.63e-36;6!UBERON:0001871;1.48e-30;6!UBERON:0002021;4.51e-30;5!UBERON:0001872;1.32e-29;5!UBERON:0000955;6.50e-28;68!UBERON:0001017;1.60e-25;75!UBERON:0001016;1.39e-20;83!UBERON:0001870;2.47e-19;3!UBERON:0000349;6.12e-19;5!UBERON:0002702;2.06e-13;2!UBERON:0002771;3.15e-13;2!UBERON:0001876;6.71e-13;2!UBERON:0011216;4.95e-10;132!UBERON:0007023;2.33e-09;114!UBERON:0007190;1.36e-07;1!UBERON:0002022;1.79e-07;1!UBERON:0003112;1.79e-07;1!UBERON:0011158;1.79e-07;1!UBERON:0003128;1.79e-07;1!UBERON:0001703;1.79e-07;1!UBERON:0002241;1.79e-07;1!UBERON:0002581;3.51e-07;1!UBERON:0002902;3.51e-07;1!UBERON:0009899;3.51e-07;1!UBERON:0001882;3.96e-07;1!UBERON:0005403;3.96e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.02e-110,22;UBERON:0001950,1.63e-110,20;UBERON:0000956,1.90e-97,25;UBERON:0000203,1.90e-97,25;UBERON:0001869,1.67e-91,32;UBERON:0001893,5.20e-86,34;UBERON:0002780,9.46e-84,41;UBERON:0001890,9.46e-84,41;UBERON:0003080,9.46e-84,41;UBERON:0006240,9.46e-84,41;UBERON:0002791,2.44e-83,32;UBERON:0003528,2.55e-78,34;UBERON:0002020,2.55e-78,34;UBERON:0001017,3.23e-67,81;UBERON:0000073,4.82e-64,53;UBERON:0002616,4.82e-64,53;UBERON:0000955,3.32e-61,68;UBERON:0006238,3.32e-61,68;UBERON:0001049,2.07e-60,56;UBERON:0005068,2.07e-60,56;UBERON:0006241,2.07e-60,56;UBERON:0007135,2.07e-60,56;UBERON:0001016,4.22e-60,89;UBERON:0003056,3.88e-55,61;UBERON:0003075,6.40e-40,82;UBERON:0007284,6.40e-40,82;UBERON:0002346,7.47e-38,86;UBERON:0000200,3.52e-36,6;UBERON:0001871,1.30e-30,6;UBERON:0010371,1.70e-30,104;UBERON:0002021,4.65e-30,5;UBERON:0001872,1.45e-29,5;UBERON:0004121,4.01e-29,171;UBERON:0000924,4.01e-29,171;UBERON:0006601,4.01e-29,171;UBERON:0007023,1.78e-27,114;UBERON:0010314,3.38e-25,132;UBERON:0011216,1.74e-24,223;UBERON:0001870,2.40e-19,3;UBERON:0000349,6.42e-19,5;UBERON:0000025,2.91e-14,192;UBERON:0002702,2.00e-13,2;UBERON:0002771,3.06e-13,2;UBERON:0001876,6.32e-13,2;UBERON:0004111,2.11e-10,240;UBERON:0007190,1.36e-07,1;UBERON:0002022,1.63e-07,1;UBERON:0003112,1.85e-07,1;UBERON:0011158,1.85e-07,1;UBERON:0003128,1.85e-07,1;UBERON:0001703,1.85e-07,1;UBERON:0002241,1.85e-07,1;UBERON:0004761,1.85e-07,1;UBERON:0009617,1.85e-07,1;UBERON:0002902,3.41e-07,1;UBERON:0009899,3.41e-07,1;UBERON:0002581,3.62e-07,1;UBERON:0001882,4.08e-07,1;UBERON:0005403,4.08e-07,1;UBERON:0000483,4.52e-07,306;UBERON:0000119,5.93e-07,309 | |||
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|short_description=p3@R3HDM1 | |||
}} |
Revision as of 05:33, 21 January 2014
Short description: | p3@R3HDM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_R3HDM1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 21bp_to_ENST00000436436, uc002tup.2, uc010fni.2_5end |
EntrezGene: | R3HDM1 |
HGNC: | 9757 |
UniProt: | C9JIX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.24e-07 | 8 |