FFCP PHASE1:Hg19::chr2:113588942..113588964,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr2:113588942..113588964,+ | |||
|id=chr2:113588942..113588964,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.63e-46!42;CL:0000860!1.08e-42!45;CL:0002194!2.35e-32!63;CL:0000576!2.35e-32!63;CL:0000040!2.35e-32!63;CL:0000559!2.35e-32!63;CL:0000766!1.15e-31!76;CL:0002009!4.00e-31!65;CL:0000839!2.04e-30!70;CL:0000557!7.07e-30!71;CL:0000763!1.44e-21!112;CL:0000049!1.44e-21!112;CL:0000359!2.24e-17!32;CL:0002087!3.63e-17!119;CL:0000738!1.02e-16!140;CL:0002031!4.42e-16!124;CL:0000037!8.36e-14!172;CL:0000566!8.36e-14!172;CL:0002032!9.23e-14!165;CL:0000837!9.23e-14!165;CL:0000723!2.04e-13!436;CL:0000048!4.51e-13!430;CL:0000034!6.50e-13!444;CL:0000988!1.53e-12!182;CL:0000192!2.43e-12!42;CL:0000514!2.43e-12!42;CL:0002595!3.30e-10!5;CL:0002371!6.49e-09!591;CL:0000187!8.41e-09!54;CL:0000680!3.71e-08!57;CL:0000056!3.71e-08!57;CL:0000355!3.71e-08!57;CL:0000183!9.16e-08!59;CL:0000144!1.35e-07!625;CL:0000393!1.40e-07!60;CL:0000211!1.40e-07!60;CL:0002593!3.66e-07!2;CL:0002594!3.81e-07!4;CL:0000134!4.98e-07!358;CL:0002589!5.40e-07!2;CL:0000548!6.80e-07!679;CL:0000004!6.80e-07!679;CL:0000255!6.80e-07!679;CL:0000012!8.54e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.36e-53;33!CL:0002057;8.36e-53;33!CL:0000473;6.99e-37;39!CL:0000234;6.99e-37;39!CL:0000576;2.01e-29;48!CL:0002595;4.99e-18;5!CL:0000766;1.59e-16;69!CL:0000359;1.19e-14;32!CL:0002593;4.03e-12;2!CL:0000763;3.53e-09;100!CL:0002087;3.78e-09;104!CL:0002592;2.04e-08;3!CL:0000192;5.14e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.66e-55,42;CL:0002057,3.66e-55,42;CL:0000473,1.06e-47,48;CL:0000234,1.06e-47,48;CL:0002194,3.01e-37,59;CL:0000576,3.01e-37,59;CL:0000040,3.01e-37,59;CL:0000559,3.01e-37,59;CL:0002009,6.73e-36,61;CL:0000766,5.98e-33,72;CL:0000839,7.05e-33,66;CL:0000557,2.51e-32,67;CL:0000763,1.72e-20,108;CL:0000049,1.72e-20,108;CL:0002595,4.38e-18,5;CL:0002087,4.66e-17,115;CL:0002031,3.64e-16,120;CL:0000359,2.01e-15,32;CL:0000738,2.48e-15,136;CL:0002032,3.09e-12,161;CL:0000837,3.09e-12,161;CL:0002593,4.64e-12,2;CL:0000037,1.56e-11,168;CL:0000192,5.01e-11,43;CL:0000514,5.01e-11,43;CL:0000988,1.03e-10,177;CL:0000048,9.02e-10,427;CL:0000723,1.52e-09,433;CL:0000034,2.98e-09,441;CL:0002592,2.70e-08,3;CL:0000187,3.05e-08,55;CL:0000680,9.97e-08,58;CL:0000056,9.97e-08,58;CL:0000355,9.97e-08,58;CL:0000393,2.90e-07,61;CL:0000211,2.90e-07,61;CL:0002379,7.57e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;7.74e-40;42!CL:0000514;5.14e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:3620,7.57e-07,1;DOID:3565,7.57e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.26e-25!80;UBERON:0002204!5.65e-25!167;UBERON:0003081!2.48e-23!216;UBERON:0001474!2.77e-23!86;UBERON:0002390!7.43e-20!102;UBERON:0003061!7.43e-20!102;UBERON:0004765!1.18e-18!101;UBERON:0001434!1.18e-18!101;UBERON:0002193!2.32e-17!112;UBERON:0002405!1.94e-15!115;UBERON:0001637!4.53e-14!42;UBERON:0003509!4.53e-14!42;UBERON:0004572!4.53e-14!42;UBERON:0004573!1.88e-10!33;UBERON:0004571!1.88e-10!33;UBERON:0003834!3.30e-10!5;UBERON:0001533!3.30e-10!5;UBERON:0001981!6.20e-10!60;UBERON:0007500!6.20e-10!60;UBERON:0004537!6.20e-10!60;UBERON:0006965!6.20e-10!60;UBERON:0003513!2.47e-09!8;UBERON:0004872!8.49e-09!84;UBERON:0000926!1.20e-08!448;UBERON:0004120!1.20e-08!448;UBERON:0006603!1.20e-08!448;UBERON:0000055!4.06e-08!69;UBERON:0001134!2.12e-07!61;UBERON:0002036!2.12e-07!61;UBERON:0003082!2.12e-07!61;UBERON:0002456!3.66e-07!2;UBERON:0001310!3.81e-07!4;UBERON:0002385!4.65e-07!63;UBERON:0001015!4.65e-07!63;UBERON:0000383!4.65e-07!63;UBERON:0002119!5.24e-07!4;UBERON:0004531!5.24e-07!4;UBERON:0001529!5.40e-07!2;UBERON:0007204!5.40e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;4.99e-18;5!UBERON:0001533;4.99e-18;5!UBERON:0003513;6.29e-13;7!UBERON:0002456;4.03e-12;2!UBERON:0004573;4.88e-11;33!UBERON:0004571;4.88e-11;33!UBERON:0003498;2.04e-08;3!UBERON:0005985;2.04e-08;3!UBERON:0001621;2.04e-08;3!UBERON:0001637;2.14e-08;42!UBERON:0003509;2.14e-08;42!UBERON:0004572;2.14e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.16e-28,76;UBERON:0002204,2.87e-26,167;UBERON:0001474,1.17e-25,82;UBERON:0004765,5.33e-23,90;UBERON:0003081,3.48e-22,203;UBERON:0002405,4.04e-22,93;UBERON:0002390,9.02e-21,98;UBERON:0003061,9.02e-21,98;UBERON:0001434,2.86e-20,100;UBERON:0002193,1.90e-18,108;UBERON:0003834,4.38e-18,5;UBERON:0001533,4.38e-18,5;UBERON:0000926,3.22e-13,315;UBERON:0004120,3.22e-13,315;UBERON:0006603,3.22e-13,315;UBERON:0003513,5.73e-13,7;UBERON:0002456,4.64e-12,2;UBERON:0004573,4.67e-12,33;UBERON:0004571,4.67e-12,33;UBERON:0001637,2.49e-11,42;UBERON:0003509,2.49e-11,42;UBERON:0004572,2.49e-11,42;UBERON:0001621,2.70e-08,3;UBERON:0007500,1.44e-07,59;UBERON:0001981,1.44e-07,59;UBERON:0004537,1.44e-07,59;UBERON:0006965,1.44e-07,59;UBERON:0001134,4.04e-07,62;UBERON:0002036,4.04e-07,62;UBERON:0003082,4.04e-07,62;UBERON:0002385,7.61e-07,64;UBERON:0001015,7.61e-07,64;UBERON:0000383,7.61e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0.802177789880567,1.30206522429511,0,0,0,0,0,0,1.39457422143411,0,1.23882548358041,5.17846306179871,3.33008918487831,2.12834006899727,17.5820297175675,1.93645405075148,5.41705946377367,0.188242339542605,0,0.224723484445085,29.0779697752357,3.85114832491312,15.983428144976,0,0.598390972864896,0,40.6292934080018,13.6172453925874,16.1933784738849,1.50749199154046,1.0429658368404,0.217188844705117,16.9511860737343,3.31449872388808,10.4432587855492,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03850885836724,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.74129687641568,2.14687330112987,0,0,0,0,0,0,1.56989728039846,0,0,0,1.01091240786658,0,4.63384301862879,0,1.21856744815642,3.16950440270266,0,0,0,0,1.99031692572366,3.06915619677634,0,0,0.405820753925408,1.54911749049875,0.845086807596724,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596143835108969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6468607378872,0,0,0,0,0,0,0,0,0,0,0.15543720058278,1.18284119991707,0.159296767163702,2.24901556081802,0.465788870628778,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:113588942..113588964,+ | |||
}} |
Revision as of 05:00, 21 January 2014
Short description: | p@chr2:113588942..113588964, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:113588942..113588964, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.16e-28 | 76 |
musculoskeletal system | 2.87e-26 | 167 |
bone element | 1.17e-25 | 82 |
skeletal element | 5.33e-23 | 90 |
lateral plate mesoderm | 3.48e-22 | 203 |
immune system | 4.04e-22 | 93 |
hematopoietic system | 9.02e-21 | 98 |
blood island | 9.02e-21 | 98 |
skeletal system | 2.86e-20 | 100 |
hemolymphoid system | 1.90e-18 | 108 |
thoracic segment blood vessel | 4.38e-18 | 5 |
subclavian artery | 4.38e-18 | 5 |
mesoderm | 3.22e-13 | 315 |
mesoderm-derived structure | 3.22e-13 | 315 |
presumptive mesoderm | 3.22e-13 | 315 |
trunk blood vessel | 5.73e-13 | 7 |
internal thoracic artery | 4.64e-12 | 2 |
systemic artery | 4.67e-12 | 33 |
systemic arterial system | 4.67e-12 | 33 |
artery | 2.49e-11 | 42 |
arterial blood vessel | 2.49e-11 | 42 |
arterial system | 2.49e-11 | 42 |
coronary artery | 2.70e-08 | 3 |
epithelial tube open at both ends | 1.44e-07 | 59 |
blood vessel | 1.44e-07 | 59 |
blood vasculature | 1.44e-07 | 59 |
vascular cord | 1.44e-07 | 59 |
skeletal muscle tissue | 4.04e-07 | 62 |
striated muscle tissue | 4.04e-07 | 62 |
myotome | 4.04e-07 | 62 |
muscle tissue | 7.61e-07 | 64 |
musculature | 7.61e-07 | 64 |
musculature of body | 7.61e-07 | 64 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 7.57e-07 | 1 |
meningioma | 7.57e-07 | 1 |