FFCP PHASE1:Hg19::chr2:89156714..89156731,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1029 | |||
|description=CAGE_peak_at_chr2:89156714..89156731,- | |||
|id=chr2:89156714..89156731,- | |||
|ontology_enrichment_celltype=CL:0000945!5.13e-11!24;CL:0000826!5.13e-11!24;CL:0000236!1.18e-07!14 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;3.29e-10;86!UBERON:0001045;9.79e-09;1!UBERON:0008801;2.33e-08;1!UBERON:0006242;2.33e-08;1!UBERON:0005754;2.33e-08;1!UBERON:0009143;3.10e-08;1!UBERON:0006298;3.10e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.20e-39!115;UBERON:0001829!7.11e-08!2;UBERON:0003408!8.21e-08!10;UBERON:0004177!4.16e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;6.81e-15;2!UBERON:0004921;1.05e-13;33!UBERON:0001044;4.51e-11;6!UBERON:0003293;4.51e-11;6!UBERON:0003294;4.51e-11;6!UBERON:0010047;4.51e-11;6!UBERON:0003408;4.51e-11;6!UBERON:0000167;4.51e-11;6!UBERON:0001154;9.79e-09;1!UBERON:0001153;9.79e-09;1!UBERON:0009854;9.79e-09;1!UBERON:0002372;1.57e-08;1!UBERON:0000029;1.57e-08;1!UBERON:0001961;1.57e-08;1!UBERON:0001744;1.57e-08;1!UBERON:0001042;1.57e-08;1!UBERON:0001735;1.57e-08;1!UBERON:0001831;2.33e-08;1!UBERON:0000998;2.33e-08;1!UBERON:0006868;2.33e-08;1!UBERON:0001567;2.33e-08;1!UBERON:0001736;3.10e-08;1!UBERON:0002171;3.10e-08;1!UBERON:0006518;3.10e-08;1!UBERON:0008949;3.10e-08;1!UBERON:0000101;3.10e-08;1!UBERON:0002167;3.10e-08;1!UBERON:0001041;3.80e-08;14!UBERON:0001155;9.19e-08;9!UBERON:0001555;1.32e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.48e-25,114;UBERON:0001829,5.92e-15,2;UBERON:0004921,8.94e-12,118;UBERON:0001044,4.29e-11,6;UBERON:0003293,4.29e-11,6;UBERON:0003294,4.29e-11,6;UBERON:0010047,4.29e-11,6;UBERON:0000167,4.29e-11,6;UBERON:0001007,2.19e-10,145;UBERON:0001555,2.19e-10,145;UBERON:0007026,2.19e-10,145;UBERON:0004119,4.12e-09,160;UBERON:0000925,4.12e-09,160;UBERON:0006595,4.12e-09,160;UBERON:0001154,9.79e-09,1;UBERON:0001153,9.79e-09,1;UBERON:0001045,9.79e-09,1;UBERON:0000029,1.52e-08,1;UBERON:0002372,1.63e-08,1;UBERON:0001961,1.63e-08,1;UBERON:0001744,1.63e-08,1;UBERON:0001735,1.63e-08,1;UBERON:0000998,2.17e-08,1;UBERON:0006868,2.17e-08,1;UBERON:0001831,2.33e-08,1;UBERON:0001567,2.33e-08,1;UBERON:0008801,2.33e-08,1;UBERON:0001736,2.69e-08,1;UBERON:0006298,2.69e-08,1;UBERON:0002171,3.10e-08,1;UBERON:0006518,3.10e-08,1;UBERON:0008949,3.10e-08,1;UBERON:0000101,3.10e-08,1;UBERON:0002167,3.10e-08,1;UBERON:0001155,9.09e-08,9;UBERON:0000166,1.00e-07,22;UBERON:0001041,1.31e-07,87;UBERON:0003408,7.73e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6105806027014,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0,1.60158394814405,0,0.661044872784862,0.954053754535364,0,1.17447437874188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.714695326373367,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79323189425963,30.3912307084262,0,0,0,0,0,0,0,2.26879832964947,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23120413606075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97630965539252,7.69580811179051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32773639572207,0,0,0,0,0,0,0,3.20179492109029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,1.41850273138557,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,1.06787412567695,0,2.48543433208317,6.94632430536731,19.5635515578965,2.55764456599881,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,3.28954660114309,0,0,0,0,0.336283722218824,0,0,0,0.460935950223117,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,4.30227358820278,0,0,3.81048345171836,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,5.86523601620379,0,0,0,0,0.196308467114945,0,0,0,1.69171052363736,0.644578879735772,0,0,0,0,0,2.75237570042724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.833565680400634,0,0,0,10.4484651131481,0,0.129177819672012,0.124149428591716,0,0.190941474834495,0,1.08858373948481,0,6.53314914241499,10.5431641927234,0,0,0,0,0,0,0.855690109280065,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p@chr2:89156714..89156731,- | |||
}} |
Revision as of 04:22, 21 January 2014
Short description: | p@chr2:89156714..89156731, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:89156714..89156731, - |
Coexpression cluster: | C1029_appendix_colon_submaxillary_small_gall_throat_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.48e-25 | 114 |
major salivary gland | 5.92e-15 | 2 |
subdivision of digestive tract | 8.94e-12 | 118 |
saliva-secreting gland | 4.29e-11 | 6 |
gland of oral region | 4.29e-11 | 6 |
gland of foregut | 4.29e-11 | 6 |
oral gland | 4.29e-11 | 6 |
oral cavity | 4.29e-11 | 6 |
digestive system | 2.19e-10 | 145 |
digestive tract | 2.19e-10 | 145 |
primitive gut | 2.19e-10 | 145 |
endoderm-derived structure | 4.12e-09 | 160 |
endoderm | 4.12e-09 | 160 |
presumptive endoderm | 4.12e-09 | 160 |
vermiform appendix | 9.79e-09 | 1 |
caecum | 9.79e-09 | 1 |
midgut | 9.79e-09 | 1 |
lymph node | 1.52e-08 | 1 |
tonsil | 1.63e-08 | 1 |
mucosa-associated lymphoid tissue | 1.63e-08 | 1 |
lymphoid tissue | 1.63e-08 | 1 |
tonsillar ring | 1.63e-08 | 1 |
seminal vesicle | 2.17e-08 | 1 |
seminal fluid secreting gland | 2.17e-08 | 1 |
parotid gland | 2.33e-08 | 1 |
cheek | 2.33e-08 | 1 |
parotid gland primordium | 2.33e-08 | 1 |
submandibular gland | 2.69e-08 | 1 |
submandibular gland primordium | 2.69e-08 | 1 |
lower lobe of right lung | 3.10e-08 | 1 |
right lung lobe | 3.10e-08 | 1 |
lower lobe of lung | 3.10e-08 | 1 |
lobe of lung | 3.10e-08 | 1 |
right lung | 3.10e-08 | 1 |
colon | 9.09e-08 | 9 |
oral opening | 1.00e-07 | 22 |
foregut | 1.31e-07 | 87 |
gland of gut | 7.73e-07 | 10 |