FFCP PHASE1:Hg19::chr2:74208728..74208757,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-160bp_to_ENST00000453103_5end | |||
|description=CAGE_peak_2_at_ENST00000453103_5end | |||
|id=chr2:74208728..74208757,- | |||
|ontology_enrichment_celltype=CL:0002076!9.05e-13!43;CL:0002251!2.41e-10!21;CL:0000223!1.19e-09!59;CL:0000066!6.90e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000082;1.77e-08;19!CL:0000322;6.32e-07;3!CL:0002621;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,1.75e-08,19;CL:0000322,6.50e-07,3;CL:0002621,9.64e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.45e-13!14;DOID:162!7.97e-07!235;DOID:14566!8.40e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1325;6.33e-22;7!DOID:3904;6.33e-22;7!DOID:3151;8.72e-18;1!DOID:3149;8.72e-18;1!DOID:1749;2.67e-11;14!DOID:1324;1.38e-10;15!DOID:0050615;5.81e-10;16!DOID:3910;9.06e-10;2!DOID:3451;1.44e-09;2!DOID:4159;1.44e-09;2!DOID:0060122;1.44e-09;2!DOID:3493;1.44e-09;2!DOID:3905;2.33e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,6.11e-22,7;DOID:3904,6.11e-22,7;DOID:3151,1.70e-17,1;DOID:3149,1.70e-17,1;DOID:1749,2.62e-11,14;DOID:1324,1.36e-10,15;DOID:0050615,5.72e-10,16;DOID:3910,9.46e-10,2;DOID:3493,1.44e-09,2;DOID:305,1.94e-09,106;DOID:3451,2.02e-09,2;DOID:4159,2.02e-09,2;DOID:0060122,2.02e-09,2;DOID:3905,2.46e-08,9;DOID:0050687,7.94e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.83e-11!169;UBERON:0000925!2.83e-11!169;UBERON:0006595!2.83e-11!169;UBERON:0001004!2.92e-11!72;UBERON:0001007!2.94e-11!155;UBERON:0001555!2.94e-11!155;UBERON:0007026!2.94e-11!155;UBERON:0003729!2.74e-09!5;UBERON:0000166!4.25e-09!21;UBERON:0000161!5.25e-09!35;UBERON:0000165!1.43e-08!28;UBERON:0000930!1.43e-08!28;UBERON:0000344!5.31e-08!12;UBERON:0003343!7.79e-08!4;UBERON:0004785!7.79e-08!4;UBERON:0004921!2.19e-07!129;UBERON:0004185!2.19e-07!129;UBERON:0004807!2.55e-07!28;UBERON:0000974!2.73e-07!10;UBERON:0000077!5.89e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0004807;2.26e-12;22!UBERON:0004903;9.06e-10;2!UBERON:0002173;9.06e-10;2!UBERON:0002186;9.06e-10;2!UBERON:0005911;8.65e-09;36!UBERON:0004802;1.77e-08;19!UBERON:0000115;1.77e-08;19!UBERON:0002048;2.14e-07;22!UBERON:0000117;2.14e-07;22!UBERON:0000171;2.14e-07;22!UBERON:0000170;2.14e-07;22!UBERON:0004821;6.32e-07;3!UBERON:0007499;6.32e-07;3!UBERON:0003215;6.32e-07;3!UBERON:0010368;6.32e-07;3!UBERON:0009911;6.32e-07;3!UBERON:0002299;6.32e-07;3!UBERON:0006524;6.32e-07;3!UBERON:0008874;6.32e-07;3!UBERON:0002169;6.32e-07;3!UBERON:0004894;6.32e-07;3!UBERON:0001949;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004807,9.02e-10,28;UBERON:0004903,9.46e-10,2;UBERON:0002173,9.46e-10,2;UBERON:0002186,9.46e-10,2;UBERON:0004802,1.75e-08,19;UBERON:0000115,1.75e-08,19;UBERON:0002048,2.12e-07,22;UBERON:0000117,2.12e-07,22;UBERON:0000171,2.12e-07,22;UBERON:0000170,2.12e-07,22;UBERON:0005597,2.12e-07,22;UBERON:0000118,2.12e-07,22;UBERON:0004821,6.50e-07,3;UBERON:0003215,6.50e-07,3;UBERON:0010368,6.50e-07,3;UBERON:0009911,6.50e-07,3;UBERON:0002299,6.50e-07,3;UBERON:0006524,6.50e-07,3;UBERON:0008874,6.50e-07,3;UBERON:0002169,6.50e-07,3;UBERON:0004894,6.50e-07,3;UBERON:0001949,9.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547497700291537,0,0.305653622991805,0.246301768349837,0.157421562627358,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.375355559615893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.09098448236334,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0.603173834469785,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.708875486211932,0.179117045405697,0.290633938513962,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0.165284915360978,0,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,2.03402920234213,1.89110145414349,0,0,0,0,0,0,0,0,0,0,4.1827123283581,0.0769502585037971,0,0,0.269272933229316,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0.167821586975843,0.189753732724185,0.158936578980379,0,0,0.282706142867882,0,1.99052386215701,0.176915129006678,0,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0,0.60129367765797,0.518440956986236,0,0,0,0,0,0,0.520679215005393,0.293977192243133,0.609414446062818,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0.391102765469606,0,0.426905989478705,0,0.864542502924636,0,0,0,0,1.88555227693436,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0.160753148465019,0,0,0,0,0,1.0063040627978,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0,0,0,0.365377795142688,1.91502377331055,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.530067437837643,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0.218419276384028,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.981477185010256,0.471878893390961,2.20114318226015,0.577628330751691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0.514464028312255,0,0,0,0.111231401892069,0.078493092850514,0,0.280272163313789,0,0,0,0,0.47404083519818,0,0.173858272302579,0,0,0.17071847709395,0,0.860454717640555,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,1.21917924982269,0,0,0,0.485710993059139,0.701818390386317,0.397901550322736,0,0.5647304101948,0.439762066981716,1.20770274853339,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,1.05868461514708,0.320965466756673,0,0.917458566809082,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0.18378979906969,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0.202117188958219,0.217716747896961,0,0.26940821205835,0.143444410785353,0.665320713092027,0.325613074443898,0,0,0,0,0,0.406896178315738,0,0,0.961705476909699 | |||
|short_description=p2@ENST00000453103 | |||
}} |
Revision as of 03:57, 21 January 2014
Short description: | p2@ENST00000453103 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000453103_5end |
Coexpression cluster: | NA |
Association with transcript: | -160bp_to_ENST00000453103_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 1.75e-08 | 19 |
pneumocyte | 6.50e-07 | 3 |
gingival epithelial cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
respiratory system epithelium | 9.02e-10 | 28 |
bronchoalveolar duct junction | 9.46e-10 | 2 |
alveolar duct | 9.46e-10 | 2 |
bronchiole | 9.46e-10 | 2 |
respiratory tract epithelium | 1.75e-08 | 19 |
lung epithelium | 1.75e-08 | 19 |
lung | 2.12e-07 | 22 |
respiratory tube | 2.12e-07 | 22 |
respiration organ | 2.12e-07 | 22 |
pair of lungs | 2.12e-07 | 22 |
lung primordium | 2.12e-07 | 22 |
lung bud | 2.12e-07 | 22 |
pulmonary alveolus epithelium | 6.50e-07 | 3 |
alveolus | 6.50e-07 | 3 |
pulmonary lobule | 6.50e-07 | 3 |
lobule | 6.50e-07 | 3 |
alveolus of lung | 6.50e-07 | 3 |
alveolar system | 6.50e-07 | 3 |
pulmonary acinus | 6.50e-07 | 3 |
alveolar sac | 6.50e-07 | 3 |
alveolar wall | 6.50e-07 | 3 |
gingival epithelium | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 6.11e-22 | 7 |
bronchogenic carcinoma | 6.11e-22 | 7 |
skin squamous cell carcinoma | 1.70e-17 | 1 |
keratoacanthoma | 1.70e-17 | 1 |
squamous cell carcinoma | 2.62e-11 | 14 |
lung cancer | 1.36e-10 | 15 |
respiratory system cancer | 5.72e-10 | 16 |
lung adenocarcinoma | 9.46e-10 | 2 |
signet ring cell adenocarcinoma | 1.44e-09 | 2 |
carcinoma | 1.94e-09 | 106 |
skin carcinoma | 2.02e-09 | 2 |
skin cancer | 2.02e-09 | 2 |
integumentary system cancer | 2.02e-09 | 2 |
lung carcinoma | 2.46e-08 | 9 |
cell type cancer | 7.94e-07 | 143 |