FFCP PHASE1:Hg19::chr2:60666949..60666962,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C380 | |||
|description=CAGE_peak_at_chr2:60666949..60666962,- | |||
|id=chr2:60666949..60666962,- | |||
|ontology_enrichment_celltype=CL:0000764!1.03e-11!2;CL:0000765!1.03e-11!2;CL:0000050!1.03e-11!2;CL:0000038!1.03e-11!2;CL:0000558!1.03e-11!2;CL:0000547!1.03e-11!2;CL:0000549!1.03e-11!2;CL:0000550!1.03e-11!2;CL:0000552!1.03e-11!2;CL:0000784!1.14e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.78e-26;2!CL:0000558;1.78e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.90e-26,2;CL:0000765,1.90e-26,2;CL:0000050,1.90e-26,2;CL:0000038,1.90e-26,2;CL:0000558,1.90e-26,2;CL:0000547,1.90e-26,2;CL:0000549,1.90e-26,2;CL:0000550,1.90e-26,2;CL:0000552,1.90e-26,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.15e-14;1!UBERON:0010227;6.23e-14;1!UBERON:0005062;8.86e-14;4!UBERON:0007284;8.86e-14;4 | |||
|ontology_enrichment_disease=DOID:114!2.11e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:114;9.26e-26;2!DOID:178;1.25e-13;1!DOID:326;1.25e-13;1!DOID:3978;1.25e-13;1!DOID:3394;1.25e-13;1!DOID:5844;1.25e-13;1!DOID:1287;2.14e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.12e-25,2;DOID:178,1.42e-13,1;DOID:326,1.42e-13,1;DOID:3978,1.42e-13,1;DOID:3394,1.42e-13,1;DOID:5844,1.42e-13,1;DOID:1287,2.35e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.69e-20!15;UBERON:0000179!1.69e-20!15;UBERON:0000463!1.69e-20!15;UBERON:0007023!1.49e-19!115;UBERON:0007100!1.26e-08!27;UBERON:0003978!4.14e-08!3;UBERON:0009751!4.14e-08!3;UBERON:0000946!4.14e-08!3;UBERON:0002523!4.14e-08!3;UBERON:0005983!4.14e-08!3;UBERON:0002165!4.14e-08!3;UBERON:0002062!4.14e-08!3;UBERON:0007280!4.14e-08!3;UBERON:0002193!1.24e-07!112;UBERON:0002390!1.58e-07!102;UBERON:0003061!1.58e-07!102;UBERON:0002106!4.05e-07!3;UBERON:0004854!4.05e-07!3;UBERON:0009034!4.05e-07!3;UBERON:0002095!4.05e-07!3;UBERON:0004782!4.05e-07!3;UBERON:0003281!4.05e-07!3;UBERON:0009664!4.05e-07!3;UBERON:0002296!4.05e-07!3;UBERON:0005602!4.05e-07!3;UBERON:0001179!4.05e-07!3;UBERON:0006293!4.05e-07!3;UBERON:0001009!5.86e-07!113;UBERON:0002146!9.91e-07!1;UBERON:0005623!9.91e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.50e-24;25!UBERON:0000178;2.15e-20;15!UBERON:0000179;2.15e-20;15!UBERON:0000463;2.15e-20;15!UBERON:0003978;4.84e-18;3!UBERON:0000946;4.84e-18;3!UBERON:0002146;3.08e-14;1!UBERON:0005623;3.08e-14;1!UBERON:0002135;4.25e-14;1!UBERON:0002079;6.23e-14;1!UBERON:0002390;1.63e-09;32!UBERON:0000948;1.68e-09;22!UBERON:0002133;1.09e-07;2!UBERON:0002081;1.32e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.29e-22,27;UBERON:0000178,2.24e-20,15;UBERON:0000179,2.24e-20,15;UBERON:0000463,2.24e-20,15;UBERON:0003978,4.64e-18,3;UBERON:0009751,4.64e-18,3;UBERON:0000946,4.64e-18,3;UBERON:0002523,4.64e-18,3;UBERON:0005983,4.64e-18,3;UBERON:0002165,4.64e-18,3;UBERON:0002062,4.64e-18,3;UBERON:0007280,4.64e-18,3;UBERON:0007023,7.13e-17,114;UBERON:0001009,1.73e-14,112;UBERON:0002146,3.08e-14,1;UBERON:0005623,3.08e-14,1;UBERON:0002135,3.98e-14,1;UBERON:0002079,5.85e-14,1;UBERON:0000948,9.81e-09,24;UBERON:0005498,9.81e-09,24;UBERON:0004140,9.81e-09,24;UBERON:0009881,9.81e-09,24;UBERON:0004141,9.81e-09,24;UBERON:0003084,9.81e-09,24;UBERON:0007005,9.81e-09,24;UBERON:0004139,9.81e-09,24;UBERON:0004291,9.81e-09,24;UBERON:0003103,1.78e-08,68;UBERON:0004797,2.88e-08,7;UBERON:0004535,3.15e-08,109;UBERON:0002133,1.05e-07,2;UBERON:0002081,1.28e-07,2;UBERON:0010227,1.28e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19245312152671,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.48149691614836,4.70583811844821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,1.13929437434833,0.714695326373367,0.822724546172388,1.29694662238543,1.08006287447623,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74780082162832,8.70809611244398,0,1.19807400299395,2.14613024068285,1.56220020209311,3.56072404179649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:60666949..60666962,- | |||
}} |
Revision as of 03:21, 21 January 2014
Short description: | p@chr2:60666949..60666962, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:60666949..60666962, - |
Coexpression cluster: | C380_heart_left_throat_skeletal_mesothelioma_aorta_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.90e-26 | 2 |
erythroblast | 1.90e-26 | 2 |
megakaryocyte-erythroid progenitor cell | 1.90e-26 | 2 |
erythroid progenitor cell | 1.90e-26 | 2 |
reticulocyte | 1.90e-26 | 2 |
proerythroblast | 1.90e-26 | 2 |
basophilic erythroblast | 1.90e-26 | 2 |
polychromatophilic erythroblast | 1.90e-26 | 2 |
orthochromatic erythroblast | 1.90e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.29e-22 | 27 |
blood | 2.24e-20 | 15 |
haemolymphatic fluid | 2.24e-20 | 15 |
organism substance | 2.24e-20 | 15 |
valve | 4.64e-18 | 3 |
cardiac mesenchyme | 4.64e-18 | 3 |
cardial valve | 4.64e-18 | 3 |
tunica intima | 4.64e-18 | 3 |
heart layer | 4.64e-18 | 3 |
endocardium | 4.64e-18 | 3 |
endocardial cushion | 4.64e-18 | 3 |
presumptive endocardium | 4.64e-18 | 3 |
adult organism | 7.13e-17 | 114 |
circulatory system | 1.73e-14 | 112 |
pulmonary valve | 3.08e-14 | 1 |
semi-lunar valve | 3.08e-14 | 1 |
mitral valve | 3.98e-14 | 1 |
left cardiac atrium | 5.85e-14 | 1 |
heart | 9.81e-09 | 24 |
primitive heart tube | 9.81e-09 | 24 |
primary heart field | 9.81e-09 | 24 |
anterior lateral plate mesoderm | 9.81e-09 | 24 |
heart tube | 9.81e-09 | 24 |
heart primordium | 9.81e-09 | 24 |
cardiac mesoderm | 9.81e-09 | 24 |
cardiogenic plate | 9.81e-09 | 24 |
heart rudiment | 9.81e-09 | 24 |
compound organ | 1.78e-08 | 68 |
blood vessel layer | 2.88e-08 | 7 |
cardiovascular system | 3.15e-08 | 109 |
atrioventricular valve | 1.05e-07 | 2 |
cardiac atrium | 1.28e-07 | 2 |
future cardiac atrium | 1.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.12e-25 | 2 |
vascular disease | 1.42e-13 | 1 |
ischemia | 1.42e-13 | 1 |
extrinsic cardiomyopathy | 1.42e-13 | 1 |
myocardial ischemia | 1.42e-13 | 1 |
myocardial infarction | 1.42e-13 | 1 |
cardiovascular system disease | 2.35e-13 | 4 |