FFCP PHASE1:Hg19::chr2:11605966..11605981,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1876 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3120 | |||
|TSSclassifier=strong | |||
|UniProt=G5E936,Q53YM3 | |||
|association_with_transcript=23bp_to_ENST00000307236,ENST00000542100,ENST00000546212_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_E2F6_5end | |||
|id=chr2:11605966..11605981,- | |||
|ontology_enrichment_celltype=CL:0000763!1.18e-19!112;CL:0000049!1.18e-19!112;CL:0000860!1.33e-19!45;CL:0002057!1.78e-19!42;CL:0000557!4.19e-19!71;CL:0002009!4.47e-19!65;CL:0000766!4.46e-18!76;CL:0002194!6.69e-18!63;CL:0000576!6.69e-18!63;CL:0000040!6.69e-18!63;CL:0000559!6.69e-18!63;CL:0000839!7.60e-18!70;CL:0000063!7.26e-15!578;CL:0000548!2.74e-12!679;CL:0000004!2.74e-12!679;CL:0000255!2.74e-12!679;CL:0000012!3.77e-12!682;CL:0002032!1.34e-09!165;CL:0000837!1.34e-09!165;CL:0000037!1.82e-09!172;CL:0000566!1.82e-09!172;CL:0000134!1.91e-09!358;CL:0000003!9.96e-09!722;CL:0002320!1.01e-08!365;CL:0000988!2.47e-08!182;CL:0000048!2.92e-08!430;CL:0000723!7.73e-08!436;CL:0000219!7.82e-08!390;CL:0002031!1.52e-07!124;CL:0000034!3.07e-07!444;CL:0000738!3.51e-07!140;CL:0002087!8.91e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.04e-62;33!CL:0002057;4.04e-62;33!CL:0000473;2.17e-45;39!CL:0000234;2.17e-45;39!CL:0000576;1.01e-30;48!CL:0000766;9.06e-23;69!CL:0000763;5.11e-13;100!CL:0000767;1.33e-07;3!CL:0002087;4.14e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.66e-59,42;CL:0002057,4.66e-59,42;CL:0000473,7.55e-54,48;CL:0000234,7.55e-54,48;CL:0002009,2.70e-50,61;CL:0000766,1.88e-48,72;CL:0000557,1.41e-47,67;CL:0002194,2.43e-46,59;CL:0000576,2.43e-46,59;CL:0000040,2.43e-46,59;CL:0000559,2.43e-46,59;CL:0000839,5.67e-43,66;CL:0000763,2.00e-41,108;CL:0000049,2.00e-41,108;CL:0002032,1.44e-23,161;CL:0000837,1.44e-23,161;CL:0000738,4.06e-23,136;CL:0000037,4.65e-22,168;CL:0002031,7.58e-22,120;CL:0000988,2.68e-20,177;CL:0002087,5.54e-19,115;CL:0000134,7.15e-10,354;CL:0002320,2.05e-09,361;CL:0000048,6.99e-09,427;CL:0000723,1.49e-08,433;CL:0000034,3.96e-08,441;CL:0000767,6.74e-08,3;CL:0000219,8.08e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.92e-43;42!CL:0000049;7.51e-13;108 | |||
|ontology_enrichment_disease=DOID:162!3.72e-10!235;DOID:14566!6.38e-10!239;DOID:305!8.41e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.79e-17!80;UBERON:0002405!6.58e-15!115;UBERON:0001474!7.34e-15!86;UBERON:0002390!1.07e-13!102;UBERON:0003061!1.07e-13!102;UBERON:0002193!2.37e-13!112;UBERON:0004765!1.66e-11!101;UBERON:0001434!1.66e-11!101;UBERON:0002384!4.18e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-40,76;UBERON:0001474,6.41e-37,82;UBERON:0002405,4.75e-33,93;UBERON:0004765,1.10e-32,90;UBERON:0002390,3.86e-29,98;UBERON:0003061,3.86e-29,98;UBERON:0001434,2.42e-28,100;UBERON:0002193,6.14e-27,108;UBERON:0002204,1.30e-17,167;UBERON:0003081,2.33e-13,203;UBERON:0002384,8.58e-09,371 | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,1.20538905604795,1.46062018077475,0.487932798790507,0,0,0,0,0.410623275218653,0,0,0.0821005894499457,0,1.57345710739562,1.15148819429164,1.85779347979291,0,0,0.369754010166788,0.0774672005803016,0,0.293600439334847,2.76997704265939,1.40381113229099,0.434021741431704,0.447830948479849,0,0.257575567634187,3.05336301437086,1.51150377475524,2.66842467306598,3.71886459049095,5.75635043230556,11.1494293522237,3.45230870786581,5.12321413058201,5.91205574721463,5.17118521104928,7.10033151942209,5.41705946377367,3.38836211176688,5.73102915121476,4.94391665779186,2.75475503133812,6.41858054152187,4.47535988059329,2.63881040149373,3.39088217956774,4.26224750532694,3.19230162491442,7.94339314567596,6.22822248995575,6.02996796616184,5.73631210262222,7.60160956467908,4.23779651843358,4.41933163185078,3.79754864929061,0.422510572623884,0,0.209658645508376,0.561643155732475,0.300353785683013,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0.434473211648397,0,0,0.255725123687061,0,0,0.434539556882471,0.795285947051099,0,0.283604451492204,0,0.175669571386252,0.0654895377488563,0,0,0.97364218096405,0.696518949197069,1.06366368415092,0,0,0,0.993812036833525,0.860234595106124,0,0,0,0.275118041940067,0.626984899610432,0.258416759169329,1.06729878806013,0.33472061276467,0,0.760272105718513,0,0,0.81014194788176,0.267899184852239,0,0.450445921933289,0,0.949265659568129,0.366403487860815,0,0,0,0,0.506522046658319,0.926864265692532,0,0.709336764396714,0,0,0.24666754841716,0.622422070799533,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,1.1409436430889,0.298897361103602,0.117434498643765,0.161872944368132,0.280901613404497,0.408308342509787,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0,0.300476117813194,0.453728732640084,0,0.213557388818567,0.423863802319124,0.300091096084402,0.206105058476878,0,0.18611685633159,0.506328996723799,0,0.252433774244115,0.184099797284599,0,0.355009592516614,0.10075209822764,0.169560592310488,0.193260853163297,0.272746120590835,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0,0.441175890929576,0.217879444092406,0.237270619111097,0.269662616320329,0.588664395376038,0,0.738155454624648,0,0,0,0,0,0,0,0.614942192715568,0,0.219500570817251,0,0.201057944823262,0.185176890317059,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0.288732895522148,0.462985512576611,0.570762456703795,2.37061319387782,0.858486162094873,0.492434012174795,0.234004265139238,0.743155811443641,0.93733833986777,0,0,0,0,0.383382679165211,1.97065295158377,0.528290604079356,0.829312462163088,0.144119953416961,0.12624243342638,0.380987365753014,0,0,0,0.205654985406647,0.300343057843917,0,0.224262168690721,0,0.2933531432838,0.775630294546667,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.399891964728228,2.43247561282381,0,0,0.479249710983165,0,0,1.01346914667305,0.410952645100767,0,0.224170287987055,0.591092280605782,0.646882724578552,0.641715181398742,0.254094624222463,0,0,0,0,0,0,1.65766205374414,0.12269149171914,0,0.271265023699736,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0.553107505625109,0.695068915744663,0,0,0.413536052245775,0.647142602455851,0.533637789017222,0.303127571446259,0,0,0.496215615637554,0,0.280660094433074,0.256278298511402,0.511707249066704,0.482561763430822,0,0.308419387605311,0.355123450626254,0.739144404124282,0.519254429183621,0.232420756919918,0.966875596732978,0.40101294060657,0.0920809889358963,0.574072240823034,0.182091168006717,0.262248829918848,0,0.308061348417659,0,0,0.211103257785751,1.13733384070897,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0.256450125116389,0,0,0,0.366277859273374,0.082509499920588,0,0,0,0,0,0.15350367472613,0.689182862422653,0,0.290033387828457,0.255679882248303,0.178064071293475,0.165284915360978,0.384380134730212,0.127612712494584,0.10115778085555,0,0,1.3940745403212,0.308033580176089,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0.316379424718726,0.953150969619124,0,0,0.318203247925937,0,0.179872457583315,0,0.471249609382746,0.202182481573316,0,0.842516912477962,0,0,0,0,0.282810863907425,0,0,1.32687795048244,0,0,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0,0,0.288666338176536,0,0,0.282431402330337,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0.320472213382419,0,0.245040215981032,0,0.28853842595289,0.0711418433484141,0.159426272728822,0.399158742865633,0.5745161103971,0.846694330895531,0.649243880549111,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| |||
|short_description=p3@E2F6 | |||
}} |
Revision as of 01:45, 21 January 2014
Short description: | p3@E2F6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_E2F6_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 23bp_to_ENST00000307236, ENST00000542100, ENST00000546212_5end |
EntrezGene: | E2F6 |
HGNC: | 3120 |
UniProt: | G5E936Q53YM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.66e-59 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.66e-59 | 42 |
defensive cell | 7.55e-54 | 48 |
phagocyte | 7.55e-54 | 48 |
macrophage dendritic cell progenitor | 2.70e-50 | 61 |
myeloid leukocyte | 1.88e-48 | 72 |
granulocyte monocyte progenitor cell | 1.41e-47 | 67 |
monopoietic cell | 2.43e-46 | 59 |
monocyte | 2.43e-46 | 59 |
monoblast | 2.43e-46 | 59 |
promonocyte | 2.43e-46 | 59 |
myeloid lineage restricted progenitor cell | 5.67e-43 | 66 |
myeloid cell | 2.00e-41 | 108 |
common myeloid progenitor | 2.00e-41 | 108 |
hematopoietic oligopotent progenitor cell | 1.44e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.44e-23 | 161 |
leukocyte | 4.06e-23 | 136 |
hematopoietic stem cell | 4.65e-22 | 168 |
hematopoietic lineage restricted progenitor cell | 7.58e-22 | 120 |
hematopoietic cell | 2.68e-20 | 177 |
nongranular leukocyte | 5.54e-19 | 115 |
mesenchymal cell | 7.15e-10 | 354 |
connective tissue cell | 2.05e-09 | 361 |
multi fate stem cell | 6.99e-09 | 427 |
somatic stem cell | 1.49e-08 | 433 |
stem cell | 3.96e-08 | 441 |
basophil | 6.74e-08 | 3 |
motile cell | 8.08e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.11e-40 | 76 |
bone element | 6.41e-37 | 82 |
immune system | 4.75e-33 | 93 |
skeletal element | 1.10e-32 | 90 |
hematopoietic system | 3.86e-29 | 98 |
blood island | 3.86e-29 | 98 |
skeletal system | 2.42e-28 | 100 |
hemolymphoid system | 6.14e-27 | 108 |
musculoskeletal system | 1.30e-17 | 167 |
lateral plate mesoderm | 2.33e-13 | 203 |
connective tissue | 8.58e-09 | 371 |