FFCP PHASE1:Hg19::chr19:50709335..50709346,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3813 | |||
|description=CAGE_peak_at_chr19:50709335..50709346,+ | |||
|id=chr19:50709335..50709346,+ | |||
|ontology_enrichment_celltype=CL:0000575!4.53e-09!2;CL:0002537!1.27e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000575;3.67e-40;2!CL:0002537;9.55e-17;5!CL:1000415;2.02e-11;2!CL:0002623;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,9.99e-40,2;CL:0002537,8.14e-17,5;CL:1000415,2.02e-11,2;CL:0002623,6.34e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000974!1.73e-08!10;UBERON:0000341!4.70e-08!2;UBERON:0006562!5.66e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000964;1.15e-20;4!UBERON:0010409;1.15e-20;4!UBERON:0000305;2.98e-12;7!UBERON:0000970;1.57e-09;20!UBERON:0002104;4.19e-09;21!UBERON:0005631;7.36e-09;10!UBERON:0010313;7.36e-09;10!UBERON:0000158;7.36e-09;10!UBERON:0000020;2.30e-08;23!UBERON:0002110;4.84e-08;3!UBERON:0001032;4.86e-08;24!UBERON:0004456;4.86e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000964,1.90e-20,4;UBERON:0010409,1.90e-20,4;UBERON:0004348,1.90e-20,4;UBERON:0005427,1.90e-20,4;UBERON:0000305,2.66e-12,7;UBERON:0004871,6.94e-11,8;UBERON:0000970,4.82e-09,21;UBERON:0002104,4.82e-09,21;UBERON:0010313,8.96e-09,10;UBERON:0002342,8.96e-09,10;UBERON:0005062,8.96e-09,10;UBERON:0002110,4.84e-08,3;UBERON:0006242,4.84e-08,3;UBERON:0000020,5.49e-08,24;UBERON:0001032,5.49e-08,24;UBERON:0004456,5.49e-08,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,1.09288586487763,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,1.80479845162965,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0.296964680832639,1.22864280839693,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.43752602686553,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,2.41981432097328,0,0,0,0,0,0,0,0,0.284609546029793,0,0.694238953340524,0.783939179315021,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0,3.32437350649165,0,0.85381197895741,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0.314408610199332,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0,0,0,0,0.22910686854405,0,0,0.894843454382338,0,0.243835849964539,0,0,0,0.485710993059139,0.701818390386317,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0.129177819672012,0.124149428591716,0,0,0,0.653150243690884,0,0.606168477131288,0.860666464712116,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:50709335..50709346,+ | |||
}} |
Revision as of 00:37, 21 January 2014
Short description: | p@chr19:50709335..50709346, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:50709335..50709346, + |
Coexpression cluster: | C3813_cervical_amniotic_gall_salivary_tongue_tonsil_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 9.99e-40 | 2 |
amnion mesenchymal stem cell | 8.14e-17 | 5 |
epithelial cell of gall bladder | 2.02e-11 | 2 |
acinar cell of salivary gland | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cornea | 1.90e-20 | 4 |
eye surface | 1.90e-20 | 4 |
optic eminence | 1.90e-20 | 4 |
corneal primordium | 1.90e-20 | 4 |
amnion | 2.66e-12 | 7 |
somatic layer of lateral plate mesoderm | 6.94e-11 | 8 |
eye | 4.82e-09 | 21 |
visual system | 4.82e-09 | 21 |
neural crest-derived structure | 8.96e-09 | 10 |
neural crest | 8.96e-09 | 10 |
neural fold | 8.96e-09 | 10 |
gallbladder | 4.84e-08 | 3 |
gall bladder primordium | 4.84e-08 | 3 |
sense organ | 5.49e-08 | 24 |
sensory system | 5.49e-08 | 24 |
entire sense organ system | 5.49e-08 | 24 |