FFCP PHASE1:Hg19::chr19:48980975..48980978,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:48980975..48980978,+ | |||
|id=chr19:48980975..48980978,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002577;3.75e-53;3!CL:0000349;2.36e-09;19!CL:0000312;3.10e-09;5!CL:0000240;6.55e-08;6!CL:0000311;6.55e-08;6!CL:0000079;6.55e-08;6!CL:0000237;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.19e-53,3;CL:0000349,2.17e-09,19;CL:0000312,3.49e-09,5;CL:0000240,7.25e-08,6;CL:0000311,7.25e-08,6;CL:0000079,7.25e-08,6;CL:0000237,7.25e-08,6;CL:0000036,7.25e-08,6;CL:0000357,7.25e-08,6;CL:0000114,7.25e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;6.55e-08;6!CL:0000114;6.55e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;3.31e-40;4!UBERON:0000478;1.31e-07;24!UBERON:0000077;7.24e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,2.22e-40,4;UBERON:0004340,2.22e-40,4;UBERON:0003124,1.28e-23,7;UBERON:0005631,2.24e-12,14;UBERON:0000158,2.24e-12,14;UBERON:0000995,1.37e-08,21;UBERON:0005795,3.04e-08,22;UBERON:0003975,3.04e-08,22;UBERON:0003133,3.11e-08,48;UBERON:0000478,1.23e-07,24;UBERON:0004175,2.28e-07,25;UBERON:0005156,7.84e-07,59;UBERON:0000990,7.84e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0.0654895377488563,0.364295288292542,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.427114777637135,0,0,0.206105058476878,0,0.18611685633159,0,0,0,0.368199594569197,0.323292113637624,0,0.302256294682921,0,0,0,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.171567810298526,0,1.1240175325762,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,1.81876542867756,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0.165284915360978,0,0,0,0,0,0.6970372701606,0.308033580176089,0,0.869932992075073,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0.487426979262569,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0.294747123039363,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0.0821154570532092,0.193978032976839,0.176512253383001,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0.231051332300676,0,0,0,0.150420656698515,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0.0657727735628491,0,0.222462803784138,0.156986185701028,0,0,0,0,0.47775168788705,0,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0,0,0.339854229375634,0,0.128915775947154,0.0999411559249289,0,0.705789743431384,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0,0,0.462175628631418,0,0,0,0,0,0,0.0918948995348449,0,1.59135266258303,0,0,0,0,0,0.129177819672012,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr19:48980975..48980978,+ | |||
}} |
Revision as of 00:18, 21 January 2014
Short description: | p@chr19:48980975..48980978, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr19:48980975..48980978, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.19e-53 | 3 |
extraembryonic cell | 2.17e-09 | 19 |
keratinocyte | 3.49e-09 | 5 |
stratified squamous epithelial cell | 7.25e-08 | 6 |
keratin accumulating cell | 7.25e-08 | 6 |
stratified epithelial cell | 7.25e-08 | 6 |
keratinizing barrier epithelial cell | 7.25e-08 | 6 |
epithelial fate stem cell | 7.25e-08 | 6 |
stratified epithelial stem cell | 7.25e-08 | 6 |
surface ectodermal cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
placenta | 2.22e-40 | 4 |
allantois | 2.22e-40 | 4 |
chorion | 1.28e-23 | 7 |
extraembryonic membrane | 2.24e-12 | 14 |
membranous layer | 2.24e-12 | 14 |
uterus | 1.37e-08 | 21 |
embryonic uterus | 3.04e-08 | 22 |
internal female genitalia | 3.04e-08 | 22 |
reproductive organ | 3.11e-08 | 48 |
extraembryonic structure | 1.23e-07 | 24 |
internal genitalia | 2.28e-07 | 25 |
reproductive structure | 7.84e-07 | 59 |
reproductive system | 7.84e-07 | 59 |