FFCP PHASE1:Hg19::chr19:46021252..46021263,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_at_chr19:46021252..46021263,+ | |||
|id=chr19:46021252..46021263,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.67e-26!42;CL:0000860!4.16e-24!45;CL:0000766!7.70e-20!76;CL:0000557!7.85e-19!71;CL:0002009!2.10e-18!65;CL:0002194!9.26e-18!63;CL:0000576!9.26e-18!63;CL:0000040!9.26e-18!63;CL:0000559!9.26e-18!63;CL:0000839!1.36e-17!70;CL:0000763!4.87e-16!112;CL:0000049!4.87e-16!112;CL:0002371!1.01e-11!591;CL:0000144!1.92e-11!625;CL:0000738!1.30e-10!140;CL:0000988!2.56e-10!182;CL:0002032!1.07e-09!165;CL:0000837!1.07e-09!165;CL:0000037!1.51e-09!172;CL:0000566!1.51e-09!172;CL:0002031!1.69e-09!124;CL:0002087!9.04e-09!119;CL:0000034!1.14e-08!444;CL:0000048!1.57e-08!430;CL:0000723!1.69e-08!436;CL:0000003!6.08e-08!722;CL:0000134!1.28e-07!358;CL:0002320!1.35e-07!365;CL:0000548!1.87e-07!679;CL:0000004!1.87e-07!679;CL:0000255!1.87e-07!679;CL:0000012!4.55e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.23e-55;33!CL:0002057;2.23e-55;33!CL:0000473;1.15e-40;39!CL:0000234;1.15e-40;39!CL:0000576;1.40e-33;48!CL:0000766;1.95e-25;69!CL:0000763;7.69e-15;100!CL:0000775;3.46e-11;3!CL:0002087;1.68e-09;104!CL:0000738;4.31e-08;136!CL:0000094;6.57e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.88e-63,42;CL:0002057,1.88e-63,42;CL:0000473,1.05e-58,48;CL:0000234,1.05e-58,48;CL:0000766,7.00e-50,72;CL:0002194,2.96e-45,59;CL:0000576,2.96e-45,59;CL:0000040,2.96e-45,59;CL:0000559,2.96e-45,59;CL:0002009,1.60e-43,61;CL:0000839,2.52e-42,66;CL:0000557,1.42e-41,67;CL:0000763,2.94e-34,108;CL:0000049,2.94e-34,108;CL:0000738,1.37e-23,136;CL:0002087,7.65e-21,115;CL:0002032,7.77e-20,161;CL:0000837,7.77e-20,161;CL:0000037,7.82e-20,168;CL:0002031,1.26e-19,120;CL:0000988,1.68e-19,177;CL:0000775,2.49e-11,3;CL:0000134,2.98e-07,354;CL:0000094,5.69e-07,8;CL:0002320,6.37e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-47;42!CL:0000049;1.28e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.91e-18!102;UBERON:0003061!8.91e-18!102;UBERON:0002371!3.66e-17!80;UBERON:0001474!3.89e-16!86;UBERON:0002193!5.54e-16!112;UBERON:0004765!7.33e-16!101;UBERON:0001434!7.33e-16!101;UBERON:0003081!2.16e-13!216;UBERON:0002204!2.12e-12!167;UBERON:0002405!5.93e-12!115;UBERON:0002384!8.07e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.06e-35,76;UBERON:0002390,5.54e-34,98;UBERON:0003061,5.54e-34,98;UBERON:0001474,1.70e-32,82;UBERON:0002193,4.84e-32,108;UBERON:0002405,8.72e-30,93;UBERON:0004765,6.97e-29,90;UBERON:0001434,3.53e-25,100;UBERON:0003081,2.59e-21,203;UBERON:0002204,7.76e-14,167;UBERON:0000926,3.54e-12,315;UBERON:0004120,3.54e-12,315;UBERON:0006603,3.54e-12,315 | |||
|phase1_expression=0,0.856402095563933,0.281908808191942,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0,2.09340350391728,0,0.263766978228454,0.123766352960047,0,0,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0.286235987131057,0.273748850145768,0.376627918784408,0.229240217243854,0.164201178899891,0.157421562627358,1.18009283054671,0,0.309632246632152,0,1.204823675113,0,0,0.142169232487422,0.293600439334847,0,0.601633342410425,1.08505435357926,0.223915474239924,0,0,2.4717700592526,2.64513160582167,0.970336244751265,2.09186133215116,0.822335776043652,2.16794459626573,2.3015391385772,2.0492856522328,1.89185783910868,1.03423704220986,2.5819387343353,0,4.1413314699373,3.0019676506363,2.69668181334102,5.81559395504715,0.962787081228281,3.19668562899521,3.62836430205388,1.19678194572979,2.13112375266347,8.12585868160035,3.40431134814684,4.9825779919646,1.25624332628372,1.5644487552606,1.3031330682307,3.63239701580021,1.47311054395026,2.21523671208619,0.845021145247767,1.91343869968539,0.209658645508376,0.561643155732475,0.450530678524519,0.16072558669708,0.855038231223746,1.19350006319454,2.00930569141097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822405995998037,0.501559486172034,0.651844533267181,0,0,0.222820913770347,0,0.443067789167242,0.541607727530031,0.25618263945135,0.650296737799391,0.164437904603676,0,0.579606171470105,0.444859689486181,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0.383959833463255,0,0.236777252044017,0.821127996921047,0.201606743224732,0.534880391567015,0,0,0.670700859703636,0,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0.189069634328136,0.443458794925128,0.263504357079378,0.0654895377488563,0.728590576585084,1.11235332835329,0,0.174129737299267,0.930705723632056,0.238490624305342,0,0,0,0,0,0.56530794192401,0,1.10047216776027,0.417989933073621,0.516833518338658,0.35576626268671,0,0.805658634218294,0.760272105718513,0.488124115096339,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0.949265659568129,1.09921046358244,0,0,0.436094052142534,0,0.506522046658319,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.404132016209064,0.326923806226917,0,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.485618833104395,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.375355559615893,0.554128230968366,0.438977620880838,0.612975591598039,0.45071417671979,0.113432183160021,0,0.213557388818567,0,0.600182192168805,0,0,0,0,0.194874010322397,0,0,0.161646056818812,0,0.403008392910561,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0,0.348581828608555,0.414644220061482,1.26160425437814,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0.329250856225877,0,0.201057944823262,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0.445893486866185,0,0.335964256397719,0.425325291727159,0,0,0,0,0.44024217006613,1.03664057770386,0.432359860250884,0.50496973370552,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0.531876233169741,3.12022310734098,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0,0.871533458600294,0.199945982364114,0,0.502257091432126,6.32501818449095,0,0,0,0.579125226670317,0.410952645100767,0,0,0.591092280605782,0.215627574859517,0.256686072559497,0,0,0,0,0,3.74503511973591,5.9832291840805,2.90090859405225,0.12269149171914,0,0,0.831883446123229,0.713715955188647,0.630809660135739,0.117141414992713,0.300946099727719,0,0,0,0.368738337083406,0.347534457872331,0.195801157462741,0.343143423810856,0,1.07857100409308,0.426910231213777,0.303127571446259,0,0,0.248107807818777,0,0,0.384417447767103,0,0.321707842287215,0,0.154209693802656,0.710246901252508,0.164254312027618,0,0.581051892299796,0.362578348774867,1.40354529212299,0.368323955743585,0.114814448164607,0.364182336013434,0.393373244878272,0.451199612907412,0.308061348417659,0,0,0,0,1.02056223165909,0,0,0,1.00337954770971,0.509752546090077,0,0,0,0,0,0.656029291399411,0,0,0,0.165018999841176,0,1.30012049207304,0,0,0.616194468458578,0.460511024178389,0,0.214840489736547,0.145016693914229,0.340906509664404,0,0,0.576570202095319,0,0.50578890427775,0.464845549297286,0,0,0,0,0,0.55597265731176,1.14499909393593,0.372158369359667,0,0.190630193923825,0.511795582622668,0,0.636406495851874,0.78494864019923,0,0.823611089208164,0.589062011728432,0.606547444719948,0,0,0.48763373908959,0,1.05650146756755,0,0,0,0,0.66343897524122,0.876901770507525,0,0,0,0.92947049429925,0,0,0.0982490410131212,0.35667105148125,0,0,0,0.379473173765715,0.699869440489966,0.384888450902048,0,1.08890984861323,0.188287601553558,0.43050537267123,0,0,0,1.52234282769651,0.764637207142375,1.70894156152249,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0.199579371432817,0.5745161103971,1.48171507906718,0.324621940274555,0,0,0,0,0,0.321176150207399,0.403599414382095,0,0,0,0,0,0.390776190804081,0,0,1.35227839237992,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.295930216910801,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0.641183153813036,0.533034776018635,0,0.784901281975124,0.166211681900156,0.225595660617181,0,0.167821586975843,0,0.158936578980379,0.843992258112108,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.208843899010911,0,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0.347119476670262,0,0.261177619741208,0.52418000472609,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0.160317640503067,0.640358984218058,0.599428828746391,0.144090417154106,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0.26961417541674,0,0,0,0,0.321506296930038,0.412618309791701,2.07720169014593,0.2249738915515,0.77380195455795,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,1.08599920350743,0,0,0,0.164185041498678,0,0,0.293104467356165,0,0,0,0,0,0,0,0,2.48083010905975,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0,1.17632909849086,0,0,0,0,0,0,0.754703705257725,0,0,0,0.310874401165561,0.591420599958536,0.159296767163702,0.899606224327209,0.155262956876259,0,0.265841714557995,1.04349012362347,0.150257608997218,0.380805212168795,0,0.181848659202559,0,0.464033759878494,0.796191777397232,0.400027764663154,0,0,0,0.192619830407303,0,0.260994291965212,0,0.231522474323834,0.489473409012935,0.179088841081487,0.308801447160972,0.438568099157414,0.176689145945881,0.192914038270915,0.337884881306145,0.256241518587947,0,0,0,0.389720617678777,0.398594520940089,0,0.655219697692825,0.491545817507439,0,0.19998739585493,0.106691729694141,0.344429959321631,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0.366857197043358,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51215543128185,0,0,0,0.0852134047591577,1.27016115057279,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0.154348316215889,0,0.940634592723046,0.490296643507811,0,0,0,0,0,0.187967835959707,0.193373663920732,0.0999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0,0.275684698604535,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.258355639344024,0,0.112131862580613,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr19:46021252..46021263,+ | |||
}} |
Revision as of 23:57, 20 January 2014
Short description: | p@chr19:46021252..46021263, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:46021252..46021263, + |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.88e-63 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.88e-63 | 42 |
defensive cell | 1.05e-58 | 48 |
phagocyte | 1.05e-58 | 48 |
myeloid leukocyte | 7.00e-50 | 72 |
monopoietic cell | 2.96e-45 | 59 |
monocyte | 2.96e-45 | 59 |
monoblast | 2.96e-45 | 59 |
promonocyte | 2.96e-45 | 59 |
macrophage dendritic cell progenitor | 1.60e-43 | 61 |
myeloid lineage restricted progenitor cell | 2.52e-42 | 66 |
granulocyte monocyte progenitor cell | 1.42e-41 | 67 |
myeloid cell | 2.94e-34 | 108 |
common myeloid progenitor | 2.94e-34 | 108 |
leukocyte | 1.37e-23 | 136 |
nongranular leukocyte | 7.65e-21 | 115 |
hematopoietic oligopotent progenitor cell | 7.77e-20 | 161 |
hematopoietic multipotent progenitor cell | 7.77e-20 | 161 |
hematopoietic stem cell | 7.82e-20 | 168 |
hematopoietic lineage restricted progenitor cell | 1.26e-19 | 120 |
hematopoietic cell | 1.68e-19 | 177 |
neutrophil | 2.49e-11 | 3 |
mesenchymal cell | 2.98e-07 | 354 |
granulocyte | 5.69e-07 | 8 |
connective tissue cell | 6.37e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.06e-35 | 76 |
hematopoietic system | 5.54e-34 | 98 |
blood island | 5.54e-34 | 98 |
bone element | 1.70e-32 | 82 |
hemolymphoid system | 4.84e-32 | 108 |
immune system | 8.72e-30 | 93 |
skeletal element | 6.97e-29 | 90 |
skeletal system | 3.53e-25 | 100 |
lateral plate mesoderm | 2.59e-21 | 203 |
musculoskeletal system | 7.76e-14 | 167 |
mesoderm | 3.54e-12 | 315 |
mesoderm-derived structure | 3.54e-12 | 315 |
presumptive mesoderm | 3.54e-12 | 315 |