FFCP PHASE1:Hg19::chr19:45411165..45411180,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=348 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=613 | |||
|TSSclassifier=strong | |||
|UniProt=Q6LBZ1 | |||
|association_with_transcript=2bp_to_X00199_5end | |||
|coexpression_cluster_id=C848 | |||
|description=CAGE_peak_5_at_APOE_5end | |||
|id=chr19:45411165..45411180,+ | |||
|ontology_enrichment_celltype=CL:0000148!3.18e-08!10;CL:0000541!3.18e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.95e-19;6!CL:0002619;2.88e-10;3!CL:0000148;3.13e-10;10!CL:0002322;6.91e-10;5!CL:0002575;2.60e-07;2!CL:0000147;4.10e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,9.52e-20,6;CL:0000148,3.70e-10,10;CL:0000541,3.70e-10,10;CL:0002619,5.49e-10,3;CL:0002322,7.67e-10,5;CL:0002575,3.86e-07,2;CL:0000147,4.58e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.27e-10;3!UBERON:0003057;7.27e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.58e-23!115;UBERON:0001017!1.84e-20!82;UBERON:0001049!1.43e-19!57;UBERON:0005068!1.43e-19!57;UBERON:0006241!1.43e-19!57;UBERON:0007135!1.43e-19!57;UBERON:0005743!1.52e-19!86;UBERON:0002616!5.49e-19!59;UBERON:0000073!5.97e-19!94;UBERON:0001016!5.97e-19!94;UBERON:0000955!8.37e-17!69;UBERON:0006238!8.37e-17!69;UBERON:0002780!1.33e-13!41;UBERON:0001890!1.33e-13!41;UBERON:0006240!1.33e-13!41;UBERON:0003080!4.53e-13!42;UBERON:0002020!8.66e-13!34;UBERON:0003528!8.66e-13!34;UBERON:0001893!2.31e-12!34;UBERON:0002791!7.32e-12!33;UBERON:0003075!1.12e-11!86;UBERON:0007284!1.12e-11!86;UBERON:0002346!1.75e-11!90;UBERON:0001869!2.98e-11!32;UBERON:0000033!2.08e-09!123;UBERON:0002619!2.41e-09!22;UBERON:0000153!3.39e-09!129;UBERON:0007811!3.39e-09!129;UBERON:0000924!1.11e-08!173;UBERON:0006601!1.11e-08!173;UBERON:0004121!1.13e-08!169;UBERON:0001950!5.19e-08!20;UBERON:0003076!5.64e-08!15;UBERON:0003057!5.64e-08!15;UBERON:0000956!1.05e-07!25;UBERON:0000203!1.05e-07!25;UBERON:0003056!1.07e-07!61;UBERON:0002420!2.69e-07!9;UBERON:0007245!2.69e-07!9;UBERON:0010009!2.69e-07!9;UBERON:0010011!2.69e-07!9;UBERON:0000454!2.69e-07!9;UBERON:0002308!3.38e-07!9;UBERON:0000125!3.38e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;7.27e-10;3!UBERON:0005174;7.27e-10;3!UBERON:0001137;7.27e-10;3!UBERON:0002107;2.66e-07;19!UBERON:0006925;2.66e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,7.93e-10,3;UBERON:0005174,7.93e-10,3;UBERON:0001137,7.93e-10,3;UBERON:0002107,2.01e-07,19;UBERON:0006925,2.01e-07,19;UBERON:0008836,2.01e-07,19 | |||
|phase1_expression=0.181678379270557,13.06013195735,0,0,3.12872766099101,0,0,1.26343974685366,8.88031135879451,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,4.25439401055856,3.2389366601898,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0.174129737299267,2.12732736830184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0.817309515567294,0.756787138224657,0.576175924479999,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58565817968474,0.530119073285941,1.16193942869518,1.45125477021519,2.01856680700503,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,6.33775174109154,8.84544495009863,5.90789906681404,0,1.35287282397425,0,0.658501712451753,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,1.72351904261178,1.8720341211139,3.71577905721821,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,1.71072446022705,1.23392991243988,1.20137223137567,0.571652865261156,0,0.43596006883328,0,0,10.7296933755565,0,0,0,0,0,0,0,2.17048642156577,0,0,0,0,0,0,0,25.54099393465,6.52934218861764,25.3000727379638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0.813795071099207,0,0,0,0,0,0,0,0,0,0,1.17480694477644,5.14715135716284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0.601519410909855,0,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0.322260734604821,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0.255897791311334,1.71175595213568,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,1.7887322147588,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0.540911356951966,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0.398495976502139,0,0.251932747854276,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,1.77148277162768,0.844175070377856,0,0.331737779793674,1.18219047581419,1.53569778007781,0,0,0.0769502585037971,0,0,0,0,0,0.274792780205587,1.06606955203727,0,0,0.498635045700469,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,0.353830258013357,0,0,0,0,0.134802265961354,0,1.63985112007737,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,5.14784993585894,0,0,0,0,0,0,0,1.80126086612937,0.273810757783986,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0.86661500537946,0.906574442192831,0.606631894687664,0.0984274815147488,0,2.38568906942791,0.136203406111576,1.12527203925513,1.10031549277787,2.9080823662043,0,0,0.182248669974074,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,1.61207457045891,5.30027555648885,0.517131825446202,0.66116300871345,0,0,0.106787412567695,0,1.65695622138878,0,0,0,0,0,0,0.612691153526923,1.31149052283922,0,0,0.610131324509816,0.500763722825999,0.573409195690071,0.443716206147409,0.18628920882415,0,0,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,2.47871528518004,0.558644917973244,0,0,0,0,0,0,0,0.319267718114302,1.8460472781668,0.252071696221718,0.0691572524642179,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0.781078098613847,0.413373593002368,0.126831620387814,0,1.09651553371436,0.496211178389294,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,1.71488009437418,0.203909198930495,0,0,0,0.156986185701028,0.942693539496011,0,0,0,0,0.0714765441766563,0,0.348724276104376,0,0,0.207216164163037,1.19502933965765,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,1.57046773691956,1.18818560130834,4.226557275834,0,0.187967835959707,0.322289439867886,0,0,0,0,0,0.458729283404541,0.573358332605805,0.315543124386369,0.271965960763659,0,0.5290268405154,0,0,0,0,0.546327859818478,0.506794004045748,0.917899467677836,0.801652215796681,1.10273879441814,2.25636785363138,0.0757786982182394,0.803892390468535,0.829169439458779,0.620597975171371,0,0,0.0645889098360061,0.0620747142958579,0,0,0.404234377916439,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0.406896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| |||
|short_description=p5@APOE | |||
}} |
Revision as of 23:49, 20 January 2014
Short description: | p5@APOE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_APOE_5end |
Coexpression cluster: | C848_Monocytederived_Mesenchymal_Hepatocyte_Adipocyte_CD14_Cardiac_liver |
Association with transcript: | 2bp_to_X00199_5end |
EntrezGene: | APOE |
HGNC: | 613 |
UniProt: | Q6LBZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 9.52e-20 | 6 |
melanocyte | 3.70e-10 | 10 |
melanoblast | 3.70e-10 | 10 |
adult endothelial progenitor cell | 5.49e-10 | 3 |
embryonic stem cell | 7.67e-10 | 5 |
central nervous system pericyte | 3.86e-07 | 2 |
pigment cell | 4.58e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 7.93e-10 | 3 |
dorsal region element | 7.93e-10 | 3 |
dorsum | 7.93e-10 | 3 |
liver | 2.01e-07 | 19 |
digestive gland | 2.01e-07 | 19 |
liver bud | 2.01e-07 | 19 |