FFCP PHASE1:Hg19::chr19:43965722..43965760,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=218bp_to_CU691667_5end | |||
|coexpression_cluster_id=C665 | |||
|description=CAGE_peak_1_at_CU691667_5end | |||
|id=chr19:43965722..43965760,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.85e-12!43;CL:0000066!6.35e-12!254;CL:0000860!7.26e-12!45;CL:0000223!4.60e-10!59;CL:0002057!1.04e-09!42;CL:0002251!1.73e-09!21;CL:0002009!1.08e-08!65;CL:0000557!2.02e-07!71;CL:0002194!2.26e-07!63;CL:0000576!2.26e-07!63;CL:0000040!2.26e-07!63;CL:0000559!2.26e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000575;1.67e-16;2!CL:0002252;2.82e-09;1!CL:0000860;1.27e-07;33!CL:0002057;1.27e-07;33!CL:0002537;2.54e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.48e-16,2;CL:0002252,2.40e-09,1;CL:0002537,2.70e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.60e-09;1 | |||
|ontology_enrichment_disease=DOID:305!3.54e-09!106;DOID:1749!2.14e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;7.85e-09;1!DOID:3149;7.85e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,7.85e-09,1;DOID:3149,7.85e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!7.33e-11!72;UBERON:0004119!1.91e-10!169;UBERON:0000925!1.91e-10!169;UBERON:0006595!1.91e-10!169;UBERON:0000161!1.40e-08!35;UBERON:0005631!2.17e-08!14;UBERON:0000158!2.17e-08!14;UBERON:0000065!3.58e-08!53;UBERON:0000077!1.22e-07!130;UBERON:0000166!2.78e-07!21;UBERON:0000062!6.79e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001043;1.09e-11;3!UBERON:0001723;1.70e-11;3!UBERON:0001033;1.70e-11;3!UBERON:0000305;1.22e-10;7!UBERON:0002372;2.82e-09;1!UBERON:0001961;2.82e-09;1!UBERON:0001744;2.82e-09;1!UBERON:0001042;2.82e-09;1!UBERON:0001735;2.82e-09;1!UBERON:0005795;7.85e-09;1!UBERON:0000997;7.85e-09;1!UBERON:0005056;7.85e-09;1!UBERON:0004176;7.85e-09;1!UBERON:0000964;1.05e-08;4!UBERON:0010409;1.05e-08;4!UBERON:0005631;1.37e-07;10!UBERON:0000158;1.37e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,9.78e-12,3;UBERON:0009143,9.78e-12,3;UBERON:0001723,1.66e-11,3;UBERON:0001033,1.66e-11,3;UBERON:0010056,1.66e-11,3;UBERON:0000305,1.34e-10,7;UBERON:0004871,2.46e-09,8;UBERON:0002372,2.82e-09,1;UBERON:0001961,2.82e-09,1;UBERON:0001744,2.82e-09,1;UBERON:0001735,2.82e-09,1;UBERON:0005631,5.55e-09,14;UBERON:0000158,5.55e-09,14;UBERON:0000964,9.94e-09,4;UBERON:0010409,9.94e-09,4;UBERON:0004348,9.94e-09,4;UBERON:0005427,9.94e-09,4;UBERON:0000997,1.16e-08,1;UBERON:0005056,1.16e-08,1;UBERON:0001042,1.17e-07,10;UBERON:0009145,1.17e-07,10;UBERON:0006562,5.31e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.31064823278103,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0,0,0.411167888021826,0,0,0,0,0,0.645484683583826,1.35426486594342,0.941211697713023,0.818718450173537,0.224723484445085,1.83650335422542,0.320929027076094,2.55734850319616,0,0,0.426224750532694,3.77272010217159,3.40431134814684,2.4912889959823,0,0,0.434377689410233,0.605399502633369,0.736555271975129,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.411202997999018,0,0.32592226663359,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,4.44941331341315,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,1.64625428112938,0,0.703702806881416,0.462942225792648,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0.283550194484773,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,1.21251028578504,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.552485933615378,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.576570202095319,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72986763370456,0,3.37876772309155,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0.254253650292766,0.709163045303809,0,0,0,0,0,0,0,0,0,0.21787692703798,6.41349223681575,2.30850775511391,0,0,0,0.108647371922008,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,1.07791637155815,0.522355239482415,0,0,0.290268993867255,0.0730893170861856,0.0821154570532092,7.17718722014304,0,0.451961481561065,0,0,0,0.586654148204409,0,0,0,0,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0.164831716762333,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,1.34173875039706,0,0,0.105600336519406,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0.11796972334774,1.28400018965175,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0.222462803784138,0,0,0.560544326627578,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.85359238546975,0.691259661814092,0,0,0,0,0,0,0,0.335566295393377,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34557380091079,0.23806443146374,0.0645889098360061,0.186224142887574,0,0,0,4.78976845373315,2.39563310759697,3.7717149688169,0.573777643141411,0,0,0,0,0,0,0.122241444182866,1.22068853494722,0,0,0 | |||
|short_description=p1@CU691667 | |||
}} |
Revision as of 23:39, 20 January 2014
Short description: | p1@CU691667 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU691667_5end |
Coexpression cluster: | C665_amniotic_esophagus_tongue_Corneal_tonsil_salivary_Urothelial |
Association with transcript: | 218bp_to_CU691667_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.48e-16 | 2 |
epithelial cell of esophagus | 2.40e-09 | 1 |
amnion mesenchymal stem cell | 2.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
esophagus | 9.78e-12 | 3 |
esophageal region | 9.78e-12 | 3 |
tongue | 1.66e-11 | 3 |
gustatory system | 1.66e-11 | 3 |
future tongue | 1.66e-11 | 3 |
amnion | 1.34e-10 | 7 |
somatic layer of lateral plate mesoderm | 2.46e-09 | 8 |
tonsil | 2.82e-09 | 1 |
mucosa-associated lymphoid tissue | 2.82e-09 | 1 |
lymphoid tissue | 2.82e-09 | 1 |
tonsillar ring | 2.82e-09 | 1 |
extraembryonic membrane | 5.55e-09 | 14 |
membranous layer | 5.55e-09 | 14 |
cornea | 9.94e-09 | 4 |
eye surface | 9.94e-09 | 4 |
optic eminence | 9.94e-09 | 4 |
corneal primordium | 9.94e-09 | 4 |
mammalian vulva | 1.16e-08 | 1 |
external female genitalia | 1.16e-08 | 1 |
chordate pharynx | 1.17e-07 | 10 |
pharyngeal region of foregut | 1.17e-07 | 10 |
pharynx | 5.31e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 7.85e-09 | 1 |
keratoacanthoma | 7.85e-09 | 1 |