FFCP PHASE1:Hg19::chr19:42827876..42827888,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3799 | |||
|description=CAGE_peak_at_chr19:42827876..42827888,+ | |||
|id=chr19:42827876..42827888,+ | |||
|ontology_enrichment_celltype=CL:0002322!5.89e-21!5;CL:0000540!7.02e-07!6;CL:0000031!7.02e-07!6;CL:0000404!7.02e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.79e-82;5!CL:0002321;1.64e-27;15!CL:0000540;1.30e-25;6!CL:0000404;1.30e-25;6!CL:0000148;1.97e-15;10!CL:0000147;3.30e-11;14!CL:0000710;5.10e-08;20!CL:0002564;9.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.80e-82,5;CL:0000540,1.30e-25,6;CL:0000031,1.30e-25,6;CL:0000404,1.30e-25,6;CL:0000047,2.13e-19,8;CL:0000148,2.12e-15,10;CL:0000541,2.12e-15,10;CL:0000147,3.48e-11,14;CL:0000133,1.39e-09,59;CL:0000710,5.29e-08,20;CL:0000221,7.40e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.30e-25;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!6.92e-17!8;UBERON:0003135!1.62e-16!11;UBERON:0000073!3.81e-12!94;UBERON:0001016!3.81e-12!94;UBERON:0001017!7.69e-12!82;UBERON:0005743!4.22e-11!86;UBERON:0003101!6.17e-10!22;UBERON:0000079!6.17e-10!22;UBERON:0002360!1.35e-08!2;UBERON:0000094!1.35e-08!2;UBERON:0007645!1.35e-08!2;UBERON:0003075!1.60e-08!86;UBERON:0007284!1.60e-08!86;UBERON:0007023!2.46e-08!115;UBERON:0001049!3.92e-08!57;UBERON:0005068!3.92e-08!57;UBERON:0006241!3.92e-08!57;UBERON:0007135!3.92e-08!57;UBERON:0002346!5.50e-08!90;UBERON:0004121!5.39e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;1.33e-17;1!UBERON:0005352;1.33e-17;1!UBERON:0000922;3.22e-07;49!UBERON:0003135;5.55e-07;11!UBERON:0002242;9.91e-07;3!UBERON:0006947;9.91e-07;3!UBERON:0004054;9.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,1.03e-17,1;UBERON:0005352,1.03e-17,1;UBERON:0003135,5.31e-07,11;UBERON:0006947,9.12e-07,3;UBERON:0004054,9.12e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53723747775827,2.65059536642971,3.137236457477,1.7622379352613,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.663475559587348,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97292201424695,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23073497220554,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08979093004525,3.43848591493084,3.73896304226267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0.26721740526556,0,4.51273570726275,0.0757786982182394,0.267964130156178,0,0.103432995861895,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:42827876..42827888,+ | |||
}} |
Revision as of 23:37, 20 January 2014
Short description: | p@chr19:42827876..42827888, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:42827876..42827888, + |
Coexpression cluster: | C3799_gastrointestinal_H9_testicular_iPS_ductus_seminal_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.80e-82 | 5 |
neuron | 1.30e-25 | 6 |
neuroblast | 1.30e-25 | 6 |
electrically signaling cell | 1.30e-25 | 6 |
neuronal stem cell | 2.13e-19 | 8 |
melanocyte | 2.12e-15 | 10 |
melanoblast | 2.12e-15 | 10 |
pigment cell | 3.48e-11 | 14 |
neurectodermal cell | 1.39e-09 | 59 |
neurecto-epithelial cell | 5.29e-08 | 20 |
ectodermal cell | 7.40e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 1.03e-17 | 1 |
spermatic cord | 1.03e-17 | 1 |
male reproductive organ | 5.31e-07 | 11 |
male genital duct | 9.12e-07 | 3 |
internal male genitalia | 9.12e-07 | 3 |