FFCP PHASE1:Hg19::chr19:19217018..19217031,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:19217018..19217031,+ | |||
|id=chr19:19217018..19217031,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.36e-10!5;CL:0000039!5.30e-08!7;CL:0000586!5.30e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.81e-50;7!CL:0000586;1.81e-50;7!CL:0002321;7.63e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.70e-50,7;CL:0000586,1.70e-50,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.56e-35;10!UBERON:0005564;1.56e-35;10!UBERON:0010122;2.90e-12;2 | |||
|ontology_enrichment_disease=DOID:3095!1.99e-09!22;DOID:2994!1.99e-09!22;DOID:2394!1.28e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.98e-25;22!DOID:2994;2.98e-25;22!DOID:3193;1.65e-12;2!DOID:962;1.65e-12;2!DOID:1192;8.96e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.91e-25,22;DOID:2994,2.91e-25,22;DOID:3193,1.65e-12,2;DOID:962,1.65e-12,2;DOID:1192,8.96e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0000991!2.60e-13!21;UBERON:0009196!2.60e-13!21;UBERON:0009117!2.60e-13!21;UBERON:0005564!2.60e-13!21;UBERON:0004176!1.50e-12!22;UBERON:0000992!2.73e-08!13;UBERON:0002323!4.37e-08!46;UBERON:0004458!2.46e-07!49;UBERON:0005156!3.45e-07!59;UBERON:0000990!3.45e-07!59;UBERON:0002418!9.41e-07!3;UBERON:0004755!9.41e-07!3;UBERON:0003133!9.82e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.01e-44;8!UBERON:0003135;2.32e-32;11!UBERON:0000991;3.26e-17;21!UBERON:0003101;1.88e-16;22!UBERON:0000079;1.88e-16;22!UBERON:0003714;1.65e-12;2!UBERON:0001873;2.90e-12;2!UBERON:0000922;8.43e-11;49!UBERON:0005383;1.30e-08;3!UBERON:0005382;1.30e-08;3!UBERON:0002323;7.69e-08;45!UBERON:0000369;9.10e-07;4!UBERON:0002435;9.10e-07;4!UBERON:0000204;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.84e-44,8;UBERON:0003135,2.23e-32,11;UBERON:0000991,3.19e-17,21;UBERON:0009196,3.19e-17,21;UBERON:0009117,3.19e-17,21;UBERON:0005564,3.19e-17,21;UBERON:0004176,1.84e-16,22;UBERON:0003101,1.84e-16,22;UBERON:0000079,1.84e-16,22;UBERON:0003714,1.65e-12,2;UBERON:0001873,2.90e-12,2;UBERON:0010122,2.90e-12,2;UBERON:0005383,1.30e-08,3;UBERON:0005382,1.30e-08,3;UBERON:0002323,4.45e-08,46;UBERON:0003133,9.38e-08,48;UBERON:0004458,1.33e-07,49;UBERON:0003886,6.31e-07,54;UBERON:0000369,9.11e-07,4;UBERON:0002435,9.11e-07,4;UBERON:0000204,9.11e-07,4;UBERON:0010082,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0.530119073285941,1.2781333715647,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0.100528972411631,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0.364182336013434,0.131124414959424,0,0.231046011313244,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0.755798243562828,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,1.08536794762867,0,0,0,0,0,0,0.230850775511391,0,0,0.269272933229316,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353024506766001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724605143054126,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,1.04349012362347,0.150257608997218,0,0.406870733204662,0,0.107410557042488,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.678930119816101,0,0.991486114072017,4.46915934378595,0,0,0,0,0.3062454773532,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0.261906694481422,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0.697448552208751,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0,0.237840181555137,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0.378499274505237,0.109265571963696,0.126698501011437,2.34574308406558,1.06886962106224,6.70832766604368,1.50424523575425,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,2.62752345645685,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p@chr19:19217018..19217031,+ | |||
}} |
Revision as of 22:19, 20 January 2014
Short description: | p@chr19:19217018..19217031, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:19217018..19217031, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.70e-50 | 7 |
germ cell | 1.70e-50 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 2.84e-44 | 8 |
male reproductive organ | 2.23e-32 | 11 |
gonad | 3.19e-17 | 21 |
indifferent external genitalia | 3.19e-17 | 21 |
indifferent gonad | 3.19e-17 | 21 |
gonad primordium | 3.19e-17 | 21 |
external genitalia | 1.84e-16 | 22 |
male organism | 1.84e-16 | 22 |
male reproductive system | 1.84e-16 | 22 |
neural tissue | 1.65e-12 | 2 |
caudate nucleus | 2.90e-12 | 2 |
future caudate nucleus | 2.90e-12 | 2 |
caudate-putamen | 1.30e-08 | 3 |
dorsal striatum | 1.30e-08 | 3 |
body cavity | 4.45e-08 | 46 |
reproductive organ | 9.38e-08 | 48 |
body cavity or lining | 1.33e-07 | 49 |
body cavity precursor | 6.31e-07 | 54 |
corpus striatum | 9.11e-07 | 4 |
striatum | 9.11e-07 | 4 |
ventral part of telencephalon | 9.11e-07 | 4 |
future corpus striatum | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.91e-25 | 22 |
germ cell cancer | 2.91e-25 | 22 |
peripheral nerve sheath neoplasm | 1.65e-12 | 2 |
neurofibroma | 1.65e-12 | 2 |
peripheral nervous system neoplasm | 8.96e-09 | 3 |