FFCP PHASE1:Hg19::chr19:12902998..12903011,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:12902998..12903011,- | |||
|id=chr19:12902998..12903011,- | |||
|ontology_enrichment_celltype=CL:0002087!2.64e-11!119;CL:0002031!6.09e-11!124;CL:0000738!1.03e-10!140;CL:0000037!1.84e-10!172;CL:0000566!1.84e-10!172;CL:0002057!2.20e-10!42;CL:0000988!3.61e-10!182;CL:0000557!7.33e-10!71;CL:0002032!7.66e-10!165;CL:0000837!7.66e-10!165;CL:0000839!2.90e-09!70;CL:0000860!4.03e-09!45;CL:0002009!5.22e-09!65;CL:0000766!7.05e-09!76;CL:0002194!1.04e-08!63;CL:0000576!1.04e-08!63;CL:0000040!1.04e-08!63;CL:0000559!1.04e-08!63;CL:0000763!5.68e-08!112;CL:0000049!5.68e-08!112;CL:0002320!5.21e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.46e-12;25!CL:0000235;7.33e-09;6!CL:0000624;1.21e-08;6!CL:0000542;3.17e-08;53!CL:0000226;3.42e-08;3!CL:0000842;3.42e-08;3!CL:0000791;2.78e-07;18!CL:0000789;2.78e-07;18!CL:0002419;2.78e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.29e-17,136;CL:0002031,1.68e-16,120;CL:0002087,1.13e-15,115;CL:0000037,5.81e-13,168;CL:0000084,1.14e-12,25;CL:0000827,1.14e-12,25;CL:0000838,2.67e-12,52;CL:0000988,4.81e-12,177;CL:0000542,5.05e-12,53;CL:0000051,5.05e-12,53;CL:0002032,4.13e-11,161;CL:0000837,4.13e-11,161;CL:0000235,6.80e-09,6;CL:0000624,9.59e-09,6;CL:0000226,4.40e-08,3;CL:0000842,4.40e-08,3;CL:0000791,2.34e-07,18;CL:0000789,2.34e-07,18;CL:0002420,2.34e-07,18;CL:0002419,2.34e-07,18;CL:0000790,2.34e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;3.17e-08;53!CL:0000790;2.78e-07;18!UBERON:0003099;4.08e-07;1!UBERON:0003852;4.08e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,7.60e-07,1;DOID:0060061,7.60e-07,1;DOID:8691,7.60e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.25e-08!80;UBERON:0001474!1.84e-08!86;UBERON:0002390!2.01e-07!102;UBERON:0003061!2.01e-07!102;UBERON:0002193!5.65e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;4.08e-07;1!UBERON:0008193;4.08e-07;1!UBERON:0010912;4.08e-07;1!UBERON:0002514;4.08e-07;1!UBERON:0003457;4.08e-07;1!UBERON:0008907;4.08e-07;1!UBERON:0008001;4.08e-07;1!UBERON:0007213;4.08e-07;1!UBERON:0009891;4.08e-07;1!UBERON:0007914;4.08e-07;1!UBERON:0007375;4.08e-07;1!UBERON:0003323;4.08e-07;1!UBERON:0010258;4.08e-07;1!UBERON:0005253;4.08e-07;1!UBERON:0007842;4.08e-07;1!UBERON:0002397;4.08e-07;1!UBERON:0003113;4.08e-07;1!UBERON:0003277;4.08e-07;1!UBERON:0001709;4.08e-07;1!UBERON:0002244;4.08e-07;1!UBERON:0005620;4.08e-07;1!UBERON:0010364;4.08e-07;1!UBERON:0004288;4.08e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,4.09e-07,1;UBERON:0008193,4.09e-07,1;UBERON:0010912,4.09e-07,1;UBERON:0002514,4.09e-07,1;UBERON:0003457,4.09e-07,1;UBERON:0008907,4.09e-07,1;UBERON:0008001,4.09e-07,1;UBERON:0007213,4.09e-07,1;UBERON:0009891,4.09e-07,1;UBERON:0007914,4.09e-07,1;UBERON:0009292,4.09e-07,1;UBERON:0003099,4.09e-07,1;UBERON:0007375,4.09e-07,1;UBERON:0003323,4.09e-07,1;UBERON:0010258,4.09e-07,1;UBERON:0007842,4.09e-07,1;UBERON:0009494,4.09e-07,1;UBERON:0010042,4.09e-07,1;UBERON:0010045,4.09e-07,1;UBERON:0010259,4.09e-07,1;UBERON:0010359,4.09e-07,1;UBERON:0009526,4.09e-07,1;UBERON:0002397,4.09e-07,1;UBERON:0003113,4.09e-07,1;UBERON:0003277,4.09e-07,1;UBERON:0001709,4.09e-07,1;UBERON:0004066,4.09e-07,1;UBERON:0002244,4.09e-07,1;UBERON:0005620,4.09e-07,1;UBERON:0004362,4.09e-07,1;UBERON:0010364,4.09e-07,1;UBERON:0010046,4.09e-07,1;UBERON:0005868,4.09e-07,1;UBERON:0007238,4.09e-07,1;UBERON:0004288,4.09e-07,1;UBERON:0004068,4.09e-07,1;UBERON:0010334,4.09e-07,1;UBERON:0003852,4.09e-07,1;UBERON:0010253,4.09e-07,1 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0.601633342410425,1.95309783644267,0,0,0,0.872389432677388,0.377875943688809,0.485168122375632,0.697287110717054,0,0.309706370895104,0.863077176966451,0.256160706529101,0,0.344745680736619,0,0,0.376484679085209,0.818718450173537,0,1.83650335422542,0,1.27867425159808,0.659702600373432,0.598390972864896,0,0.290209238628584,0,0.622822248995575,1.7587406567972,0.521482918420201,0,0,0,0,0.211255286311942,0.212604299965044,0,0.561643155732475,0.450530678524519,0,0.570025487482497,0.19891667719909,0.730656615058536,0,0,0,0,0,0,0,0,1.1384259382189,1.17447437874188,1.52909291250092,0,0,0,0,1.96505381374582,6.16804496998528,0,0,0,0,0,1.17842362989935,0,0,0.25618263945135,0.390178042679635,0.164437904603676,0.276350017785848,0.289803085735052,0.14828656316206,0,2.09071047609954,0,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0,0,0,0,0,0.403213486449465,1.33720097891754,2.46201486600758,0,0,0.12786256184353,0,0,0.289693037921647,0,0.973269740605272,0,0,0.263504357079378,0,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07633781413317,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0.504867548488229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0.858486162094873,0,0,0.594524649154913,0,0,0,0.0895585227028483,0,0,0,0,1.03664057770386,0.864719720501769,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0,0,0,4.86495122564762,1.50677127429638,4.21667878966063,0,0,0,0,0,0,0,0,1.07813787429759,0.898401253958239,0,0,0,0,0.637938751653163,0,0,0,0,0.500170521059677,0.271265023699736,0,0.178428988797162,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0,0,0.620304078368662,1.07857100409308,3.30855429190677,0,0,0.30239029332968,0,0,0,0,0.511707249066704,0,0,0,0.532685175939381,0,0,0,0,0,0.552485933615378,0,0,0,0.451199612907412,0,0,0,0,0,0,0,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,0,0.082509499920588,0,0,0,0,0.308097234229289,0.15350367472613,0,0,0,0.170453254832202,0,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.471249609382746,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,2.11107635297664,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,1.7737206141467,0,0,0,0,0,0,0,0,0,0.213648142254946,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0.456469358066384,0.313359791546046,0,0.169291777801603,0.1605880751037,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0.33307196799782,0,1.30998378285754,0,0,0,0,0,0,0,0,0,0.222617410045812,4.28490072989575,0.422250816255987,0.996239941255349,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0.969332746095218,0,0,0,0,2.17499872630438,0.227586896570999,0,0.472775363535873,0,0.583209226766509,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0.784901281975124,0.166211681900156,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0.802577647298789,0,0.182454789215666,0,0,0,1.20990716048664,0,0.126373159256976,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0,0,0,0.640358984218058,0.599428828746391,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.169346664131569,0.795229689809303,0,0,0.137539436597234,0,0,1.5476039091159,0,1.0063040627978,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,1.65695622138878,0,0.592834895693833,0,0,1.08803560673895,0.2506898940227,0,0.327872630709804,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0.457680136793847,0.151230923763239,0,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0.214821114084977,0.464033759878494,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0.734210113519403,0,0.617602894321944,0.219284049578707,0,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0,0,1.9998739585493,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.743614585554013,0,0.318004350653419,0,0,12.6963339728646,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.300841313397029,0.20170506870352,0,0,0,0,0,0,0.4133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| |||
|short_description=p@chr19:12902998..12903011,- | |||
}} |
Revision as of 21:31, 20 January 2014
Short description: | p@chr19:12902998..12903011, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:12902998..12903011, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.29e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 1.68e-16 | 120 |
nongranular leukocyte | 1.13e-15 | 115 |
hematopoietic stem cell | 5.81e-13 | 168 |
T cell | 1.14e-12 | 25 |
pro-T cell | 1.14e-12 | 25 |
lymphoid lineage restricted progenitor cell | 2.67e-12 | 52 |
hematopoietic cell | 4.81e-12 | 177 |
lymphocyte | 5.05e-12 | 53 |
common lymphoid progenitor | 5.05e-12 | 53 |
hematopoietic oligopotent progenitor cell | 4.13e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.13e-11 | 161 |
macrophage | 6.80e-09 | 6 |
CD4-positive, alpha-beta T cell | 9.59e-09 | 6 |
single nucleate cell | 4.40e-08 | 3 |
mononuclear cell | 4.40e-08 | 3 |
mature alpha-beta T cell | 2.34e-07 | 18 |
alpha-beta T cell | 2.34e-07 | 18 |
immature T cell | 2.34e-07 | 18 |
mature T cell | 2.34e-07 | 18 |
immature alpha-beta T cell | 2.34e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 7.60e-07 | 1 |
cutaneous T cell lymphoma | 7.60e-07 | 1 |
mycosis fungoides | 7.60e-07 | 1 |