FFCP PHASE1:Hg19::chr19:11456905..11456930,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374882 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29631 | |||
|TSSclassifier=strong | |||
|UniProt=Q6UW68 | |||
|association_with_transcript=50bp_to_ENST00000354882,ENST00000447337,NM_001145416,NM_033408,NM_198536,uc002mqz.2,uc002mra.2,uc002mrb.2,uc002mrc.2_5end | |||
|description=CAGE_peak_2_at_TMEM205_5end | |||
|id=chr19:11456905..11456930,- | |||
|ontology_enrichment_celltype=CL:0000220!3.12e-10!246;CL:0002321!3.94e-10!248;CL:0000066!3.02e-09!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.12e-10,250;CL:0000066,1.77e-09,253;CL:0000115,5.02e-07,36;CL:0002078,7.78e-07,45;CL:1000497,8.16e-07,17;CL:0002518,8.16e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.11e-12!659;UBERON:0000467!1.90e-11!625;UBERON:0000480!1.92e-11!626;UBERON:0000922!2.37e-11!612;UBERON:0002050!8.22e-11!605;UBERON:0005423!8.22e-11!605;UBERON:0000923!8.28e-11!604;UBERON:0005291!8.28e-11!604;UBERON:0006598!8.28e-11!604;UBERON:0002532!8.28e-11!604;UBERON:0009569!3.48e-10!113;UBERON:0002100!1.66e-09!216;UBERON:0005177!1.83e-09!107;UBERON:0000483!5.68e-09!309;UBERON:0003914!7.69e-09!118;UBERON:0006554!1.64e-08!44;UBERON:0002113!1.85e-08!27;UBERON:0003918!1.85e-08!27;UBERON:0005095!1.85e-08!27;UBERON:0007687!1.85e-08!27;UBERON:0005172!2.28e-08!55;UBERON:0005173!2.28e-08!55;UBERON:0000119!2.79e-08!312;UBERON:0002417!3.41e-08!61;UBERON:0000916!3.41e-08!61;UBERON:0004111!4.97e-08!241;UBERON:0001008!9.51e-08!45;UBERON:0000025!1.36e-07!194;UBERON:0000475!2.20e-07!365;UBERON:0000062!2.63e-07!511;UBERON:0000489!5.07e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.30e-08;24!UBERON:0011143;1.30e-08;24!UBERON:0006554;9.80e-08;30!UBERON:0001008;9.80e-08;30!UBERON:0000489;6.75e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,2.32e-11,592;UBERON:0002100,1.91e-10,199;UBERON:0005423,3.83e-10,581;UBERON:0009569,6.95e-10,112;UBERON:0000483,1.26e-09,306;UBERON:0006554,1.54e-09,47;UBERON:0002113,2.14e-09,26;UBERON:0003918,2.14e-09,26;UBERON:0011143,2.14e-09,26;UBERON:0005095,2.14e-09,26;UBERON:0007687,2.14e-09,26;UBERON:0003914,2.18e-09,117;UBERON:0005177,4.54e-09,101;UBERON:0005172,5.50e-09,54;UBERON:0005173,5.50e-09,54;UBERON:0000119,7.22e-09,309;UBERON:0001008,8.10e-09,48;UBERON:0002417,9.13e-09,60;UBERON:0000916,9.13e-09,60;UBERON:0004111,1.16e-08,240;UBERON:0000025,4.68e-08,192;UBERON:0000489,9.47e-08,31;UBERON:0003104,1.78e-07,160;UBERON:0009142,1.78e-07,160;UBERON:0000923,2.81e-07,560;UBERON:0010316,2.81e-07,560;UBERON:0005291,2.81e-07,560;UBERON:0006598,2.81e-07,560;UBERON:0010317,2.81e-07,560;UBERON:0002532,2.81e-07,560;UBERON:0002050,5.72e-07,564 | |||
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| |||
|short_description=p2@TMEM205 | |||
}} |
Revision as of 21:22, 20 January 2014
Short description: | p2@TMEM205 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM205_5end |
Coexpression cluster: | NA |
Association with transcript: | 50bp_to_ENST00000354882, ENST00000447337, NM_001145416, NM_033408, NM_198536, uc002mqz.2, uc002mra.2, uc002mrb.2, uc002mrc.2_5end |
EntrezGene: | TMEM205 |
HGNC: | 29631 |
UniProt: | Q6UW68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.12e-10 | 250 |
epithelial cell | 1.77e-09 | 253 |
endothelial cell | 5.02e-07 | 36 |
meso-epithelial cell | 7.78e-07 | 45 |
kidney cell | 8.16e-07 | 17 |
kidney epithelial cell | 8.16e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
embryo | 2.32e-11 | 592 |
trunk | 1.91e-10 | 199 |
developing anatomical structure | 3.83e-10 | 581 |
subdivision of trunk | 6.95e-10 | 112 |
epithelium | 1.26e-09 | 306 |
urinary system structure | 1.54e-09 | 47 |
kidney | 2.14e-09 | 26 |
kidney mesenchyme | 2.14e-09 | 26 |
upper urinary tract | 2.14e-09 | 26 |
kidney rudiment | 2.14e-09 | 26 |
kidney field | 2.14e-09 | 26 |
epithelial tube | 2.18e-09 | 117 |
trunk region element | 4.54e-09 | 101 |
abdomen element | 5.50e-09 | 54 |
abdominal segment element | 5.50e-09 | 54 |
cell layer | 7.22e-09 | 309 |
renal system | 8.10e-09 | 48 |
abdominal segment of trunk | 9.13e-09 | 60 |
abdomen | 9.13e-09 | 60 |
anatomical conduit | 1.16e-08 | 240 |
tube | 4.68e-08 | 192 |
cavitated compound organ | 9.47e-08 | 31 |
mesenchyme | 1.78e-07 | 160 |
entire embryonic mesenchyme | 1.78e-07 | 160 |
germ layer | 2.81e-07 | 560 |
germ layer / neural crest | 2.81e-07 | 560 |
embryonic tissue | 2.81e-07 | 560 |
presumptive structure | 2.81e-07 | 560 |
germ layer / neural crest derived structure | 2.81e-07 | 560 |
epiblast (generic) | 2.81e-07 | 560 |
embryonic structure | 5.72e-07 | 564 |