FFCP PHASE1:Hg19::chr19:4770772..4770775,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=407045 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31640 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=90bp_to_NR_029607,uc010xij.1_5end | |||
|coexpression_cluster_id=C115 | |||
|description=CAGE_peak_1_at_MIR7-3_5end | |||
|id=chr19:4770772..4770775,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.04e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!2.89e-36!20;UBERON:0002780!8.37e-35!41;UBERON:0001890!8.37e-35!41;UBERON:0006240!8.37e-35!41;UBERON:0003080!6.14e-34!42;UBERON:0002619!5.54e-33!22;UBERON:0001869!1.57e-32!32;UBERON:0001049!2.31e-32!57;UBERON:0005068!2.31e-32!57;UBERON:0006241!2.31e-32!57;UBERON:0007135!2.31e-32!57;UBERON:0002791!1.62e-31!33;UBERON:0002616!3.43e-31!59;UBERON:0002020!1.47e-30!34;UBERON:0003528!1.47e-30!34;UBERON:0001893!1.47e-30!34;UBERON:0000956!5.27e-29!25;UBERON:0000203!5.27e-29!25;UBERON:0000955!6.37e-26!69;UBERON:0006238!6.37e-26!69;UBERON:0003056!8.68e-23!61;UBERON:0001017!1.80e-21!82;UBERON:0000073!1.04e-20!94;UBERON:0001016!1.04e-20!94;UBERON:0003075!1.24e-20!86;UBERON:0007284!1.24e-20!86;UBERON:0005743!2.30e-20!86;UBERON:0002346!1.34e-19!90;UBERON:0000007!7.07e-18!2;UBERON:0000033!1.98e-15!123;UBERON:0002021!2.87e-15!5;UBERON:0001872!5.63e-15!5;UBERON:0007023!6.79e-15!115;UBERON:0000153!1.40e-14!129;UBERON:0007811!1.40e-14!129;UBERON:0000200!1.95e-12!6;UBERON:0004121!8.31e-12!169;UBERON:0002771!1.59e-11!3;UBERON:0000924!1.83e-11!173;UBERON:0006601!1.83e-11!173;UBERON:0002022!2.16e-09!1;UBERON:0003296!2.17e-09!4;UBERON:0010133!2.17e-09!4;UBERON:0001871!2.27e-09!7;UBERON:0003112!2.35e-09!1;UBERON:0000032!2.35e-09!1;UBERON:0005253!2.35e-09!1;UBERON:0003128!2.35e-09!1;UBERON:0002241!2.35e-09!1;UBERON:0001703!2.35e-09!1;UBERON:0004761!2.35e-09!1;UBERON:0009617!2.35e-09!1;UBERON:0001874!2.77e-09!1;UBERON:0002581!3.25e-09!1;UBERON:0001882!3.53e-09!1;UBERON:0005403!3.53e-09!1;UBERON:0000369!7.89e-09!4;UBERON:0002435!7.89e-09!4;UBERON:0000204!7.89e-09!4;UBERON:0010082!7.89e-09!4;UBERON:0000025!1.33e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.61e-131;2!UBERON:0003296;2.40e-66;4!UBERON:0010133;2.40e-66;4!UBERON:0001894;1.49e-38;7!UBERON:0002780;1.06e-14;41!UBERON:0001890;1.06e-14;41!UBERON:0002021;1.83e-14;5!UBERON:0002368;1.20e-08;33!UBERON:0000073;1.24e-08;53!UBERON:0002616;1.24e-08;53!UBERON:0000955;6.46e-08;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.61e-131,2;UBERON:0003296,2.40e-66,4;UBERON:0010133,2.40e-66,4;UBERON:0001894,1.49e-38,7;UBERON:0006222,1.49e-38,7;UBERON:0002780,3.52e-15,41;UBERON:0001890,3.52e-15,41;UBERON:0003080,3.52e-15,41;UBERON:0006240,3.52e-15,41;UBERON:0002021,1.83e-14,5;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0003056,1.22e-10,61;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0002368,1.09e-08,35;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89;UBERON:0000949,5.42e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0.159633859057151,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0.126831620387814,0,0,0,0,0,0,0,3.64179362541979,4.09791944432336,0,0,0,0,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795803100645473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@MIR7-3 | |||
}} |
Revision as of 20:43, 20 January 2014
Short description: | p1@MIR7-3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR7-3_5end |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | 90bp_to_NR_029607, uc010xij.1_5end |
EntrezGene: | MIR7-3 |
HGNC: | 31640 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.61e-131 | 2 |
gland of diencephalon | 2.40e-66 | 4 |
neuroendocrine gland | 2.40e-66 | 4 |
diencephalon | 1.49e-38 | 7 |
future diencephalon | 1.49e-38 | 7 |
regional part of forebrain | 3.52e-15 | 41 |
forebrain | 3.52e-15 | 41 |
anterior neural tube | 3.52e-15 | 41 |
future forebrain | 3.52e-15 | 41 |
occipital lobe | 1.83e-14 | 5 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
pre-chordal neural plate | 1.22e-10 | 61 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
endocrine gland | 1.09e-08 | 35 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |
endocrine system | 5.42e-07 | 45 |