FFCP PHASE1:Hg19::chr18:55020179..55020199,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=101bp_to_AB463290_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_AB463290_5end | |||
|id=chr18:55020179..55020199,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;3.20e-07;1!CL:0000164;3.20e-07;1!CL:0000502;3.20e-07;1!CL:0000172;3.20e-07;1!CL:0000173;3.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.21e-07,1;CL:0000164,2.21e-07,1;CL:0000502,2.21e-07,1;CL:0000172,2.21e-07,1;CL:0000173,2.21e-07,1;CL:0002351,2.21e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.44e-17;82!UBERON:0010122;8.30e-14;2!UBERON:0006222;8.00e-08;1!CL:0002351;3.20e-07;1 | |||
|ontology_enrichment_disease=DOID:169!3.13e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:4430;3.20e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.86e-94!57;UBERON:0005068!4.86e-94!57;UBERON:0006241!4.86e-94!57;UBERON:0007135!4.86e-94!57;UBERON:0001017!4.24e-87!82;UBERON:0000073!1.97e-83!94;UBERON:0001016!1.97e-83!94;UBERON:0005743!1.55e-82!86;UBERON:0002616!1.93e-82!59;UBERON:0002780!9.29e-81!41;UBERON:0001890!9.29e-81!41;UBERON:0006240!9.29e-81!41;UBERON:0003080!1.20e-78!42;UBERON:0000955!2.29e-78!69;UBERON:0006238!2.29e-78!69;UBERON:0003075!1.72e-67!86;UBERON:0007284!1.72e-67!86;UBERON:0001893!7.66e-67!34;UBERON:0001869!1.17e-66!32;UBERON:0002020!1.77e-66!34;UBERON:0003528!1.77e-66!34;UBERON:0002791!4.74e-64!33;UBERON:0002346!5.67e-64!90;UBERON:0003056!1.71e-54!61;UBERON:0002619!4.17e-54!22;UBERON:0001950!1.08e-48!20;UBERON:0000956!3.72e-47!25;UBERON:0000203!3.72e-47!25;UBERON:0007023!6.57e-44!115;UBERON:0004121!7.52e-43!169;UBERON:0000924!1.46e-41!173;UBERON:0006601!1.46e-41!173;UBERON:0000033!2.15e-41!123;UBERON:0000153!6.20e-39!129;UBERON:0007811!6.20e-39!129;UBERON:0000025!6.23e-22!194;UBERON:0002420!3.70e-21!9;UBERON:0007245!3.70e-21!9;UBERON:0010009!3.70e-21!9;UBERON:0010011!3.70e-21!9;UBERON:0000454!3.70e-21!9;UBERON:0002308!2.06e-20!9;UBERON:0000125!2.06e-20!9;UBERON:0000200!8.85e-19!6;UBERON:0001871!6.45e-18!7;UBERON:0003076!1.60e-16!15;UBERON:0003057!1.60e-16!15;UBERON:0009663!9.29e-16!7;UBERON:0002021!1.42e-15!5;UBERON:0000349!1.70e-15!5;UBERON:0004111!2.24e-15!241;UBERON:0001894!7.95e-15!7;UBERON:0006222!7.95e-15!7;UBERON:0004733!1.21e-13!12;UBERON:0002028!1.21e-13!12;UBERON:0007277!1.21e-13!12;UBERON:0000369!1.72e-13!4;UBERON:0002435!1.72e-13!4;UBERON:0000204!1.72e-13!4;UBERON:0010082!1.72e-13!4;UBERON:0000483!3.93e-13!309;UBERON:0000119!6.91e-13!312;UBERON:0004732!1.72e-12!13;UBERON:0000477!5.57e-12!286;UBERON:0002298!6.76e-12!8;UBERON:0000064!2.42e-11!219;UBERON:0005383!1.60e-10!3;UBERON:0005382!1.60e-10!3;UBERON:0001872!2.74e-10!5;UBERON:0002771!3.34e-10!3;UBERON:0000475!2.90e-09!365;UBERON:0000988!6.92e-09!3;UBERON:0001896!6.92e-09!3;UBERON:0005290!6.92e-09!3;UBERON:0010096!6.92e-09!3;UBERON:0002680!1.28e-07!9;UBERON:0001895!1.28e-07!9;UBERON:0010092!1.28e-07!9;UBERON:0001873!1.37e-07!2;UBERON:0010122!1.37e-07!2;UBERON:0001870!1.76e-07!2;UBERON:0001876!3.55e-07!2;UBERON:0003296!4.33e-07!4;UBERON:0010133!4.33e-07!4;UBERON:0001954!5.09e-07!2;UBERON:0003022!5.09e-07!2;UBERON:0002421!5.09e-07!2;UBERON:0002600!5.09e-07!2;UBERON:0000007!7.69e-07!2;UBERON:0001897!7.92e-07!2;UBERON:0001875!9.71e-07!2;UBERON:0006514!9.71e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.27e-90;32!UBERON:0002791;2.12e-83;32!UBERON:0002619;5.79e-82;22!UBERON:0001893;8.19e-82;34!UBERON:0001950;4.21e-80;20!UBERON:0003528;2.09e-78;34!UBERON:0002020;2.09e-78;34!UBERON:0000956;4.37e-72;25!UBERON:0000203;4.37e-72;25!UBERON:0002780;2.11e-62;41!UBERON:0001890;2.11e-62;41!UBERON:0000073;5.75e-39;53!UBERON:0002616;5.75e-39;53!UBERON:0000200;1.22e-36;6!UBERON:0002021;3.36e-30;5!UBERON:0000955;4.17e-30;68!UBERON:0001017;3.67e-29;75!UBERON:0000369;9.56e-26;4!UBERON:0002435;9.56e-26;4!UBERON:0000204;9.56e-26;4!UBERON:0002420;1.43e-24;9!UBERON:0007245;1.43e-24;9!UBERON:0010009;1.43e-24;9!UBERON:0010011;1.43e-24;9!UBERON:0000454;1.43e-24;9!UBERON:0009663;2.83e-22;7!UBERON:0001016;2.48e-21;83!UBERON:0005383;1.15e-19;3!UBERON:0005382;1.15e-19;3!UBERON:0001872;1.23e-19;5!UBERON:0001870;1.39e-19;3!UBERON:0000125;2.74e-17;9!UBERON:0002308;2.74e-17;9!UBERON:0001871;3.27e-14;6!UBERON:0001873;8.30e-14;2!UBERON:0002702;1.00e-13;2!UBERON:0002771;2.33e-13;2!UBERON:0007023;7.87e-13;114!UBERON:0000349;5.77e-12;5!UBERON:0011216;9.12e-10;132!UBERON:0001882;8.00e-08;1!UBERON:0005403;8.00e-08;1!UBERON:0002581;1.38e-07;1!UBERON:0001874;1.38e-07;1!UBERON:0003112;1.38e-07;1!UBERON:0011158;1.38e-07;1!UBERON:0003128;1.38e-07;1!UBERON:0001703;1.38e-07;1!UBERON:0002241;1.38e-07;1!UBERON:0010314;2.31e-07;132!UBERON:0002902;3.20e-07;1!UBERON:0002022;3.20e-07;1!UBERON:0009899;3.20e-07;1!UBERON:0007190;3.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.52e-102,32;UBERON:0001893,1.03e-95,34;UBERON:0002791,2.70e-93,32;UBERON:0002780,3.04e-93,41;UBERON:0001890,3.04e-93,41;UBERON:0003080,3.04e-93,41;UBERON:0006240,3.04e-93,41;UBERON:0003528,1.05e-87,34;UBERON:0002020,1.05e-87,34;UBERON:0002619,9.26e-82,22;UBERON:0001950,6.68e-80,20;UBERON:0000073,2.88e-77,53;UBERON:0002616,2.88e-77,53;UBERON:0001049,6.15e-73,56;UBERON:0005068,6.15e-73,56;UBERON:0006241,6.15e-73,56;UBERON:0007135,6.15e-73,56;UBERON:0000956,6.61e-72,25;UBERON:0000203,6.61e-72,25;UBERON:0000955,4.13e-63,68;UBERON:0006238,4.13e-63,68;UBERON:0003056,1.39e-61,61;UBERON:0001017,1.36e-56,81;UBERON:0001016,1.98e-54,89;UBERON:0003075,1.66e-48,82;UBERON:0007284,1.66e-48,82;UBERON:0002346,4.83e-46,86;UBERON:0010371,2.85e-37,104;UBERON:0007023,6.87e-37,114;UBERON:0000200,1.23e-36,6;UBERON:0010314,8.76e-31,132;UBERON:0002021,4.44e-30,5;UBERON:0004121,3.04e-26,171;UBERON:0000924,3.04e-26,171;UBERON:0006601,3.04e-26,171;UBERON:0000369,7.95e-26,4;UBERON:0002435,7.95e-26,4;UBERON:0000204,7.95e-26,4;UBERON:0010082,7.95e-26,4;UBERON:0002420,1.10e-24,9;UBERON:0007245,1.10e-24,9;UBERON:0010009,1.10e-24,9;UBERON:0010011,1.10e-24,9;UBERON:0000454,1.10e-24,9;UBERON:0009663,2.72e-22,7;UBERON:0011216,1.94e-20,223;UBERON:0005383,8.96e-20,3;UBERON:0005382,8.96e-20,3;UBERON:0001872,1.06e-19,5;UBERON:0001870,2.15e-19,3;UBERON:0000025,6.73e-18,192;UBERON:0000125,2.66e-17,9;UBERON:0002308,2.66e-17,9;UBERON:0001871,3.45e-14,6;UBERON:0001873,8.06e-14,2;UBERON:0010122,8.06e-14,2;UBERON:0002702,1.10e-13,2;UBERON:0002771,2.49e-13,2;UBERON:0004111,2.81e-13,240;UBERON:0000349,4.99e-12,5;UBERON:0000483,2.82e-09,306;UBERON:0000119,3.91e-09,309;UBERON:0001882,8.54e-08,1;UBERON:0005403,8.54e-08,1;UBERON:0001874,1.10e-07,1;UBERON:0003112,1.72e-07,1;UBERON:0011158,1.72e-07,1;UBERON:0003128,1.72e-07,1;UBERON:0001703,1.72e-07,1;UBERON:0002241,1.72e-07,1;UBERON:0004761,1.72e-07,1;UBERON:0009617,1.72e-07,1;UBERON:0002581,1.83e-07,1;UBERON:0007190,2.07e-07,1;UBERON:0002022,3.01e-07,1;UBERON:0002902,4.09e-07,1;UBERON:0009899,4.09e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,0.703347082052564,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,1.66982576691332,0,0,0,0,0,0,0,1.03423011972439,0,0,8.85741385813839,2.41192877250816,0,1.76926815889959,0.295547618953547,2.4132393686937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,3.04543779442941,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,2.02594547058812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.544813624446302,0.160753148465019,0.137539436597234,0,0,0,1.33649024647654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,3.41673541725497,2.1282458220105,0.573409195690071,0.221858103073705,0.434674820589684,0.415045904808692,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0.895260599125562,2.15649622793364,0,0.436838552768056,0,0,0,0,0,0,0,0,0,3.08300280463006,2.8339315265117,1.27707087245721,3.69209455633359,1.00828678488687,1.10651603942749,2.09918339321406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95858995393344,1.56215619722769,2.48024155801421,1.45856363445986,0,0,0,0,0,0.535701835878287,0,0.606965604236632,1.13831095675649,0,0,0,0.611727596791485,2.03895598044832,0,0,0,2.82808061848803,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.301925687133347,0,0,0,0,1.88541237681301,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,1.01987235286372,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0.829169439458779,0.724030971033267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@AB463290 | |||
}} |
Revision as of 19:29, 20 January 2014
Short description: | p1@AB463290 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB463290_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 101bp_to_AB463290_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.21e-07 | 1 |
enteroendocrine cell | 2.21e-07 | 1 |
type D enteroendocrine cell | 2.21e-07 | 1 |
somatostatin secreting cell | 2.21e-07 | 1 |
pancreatic D cell | 2.21e-07 | 1 |
progenitor cell of endocrine pancreas | 2.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.21e-07 | 1 |