FFCP PHASE1:Hg19::chr18:52989222..52989233,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |||
|TSSclassifier=strong | |||
|UniProt=G0LNU9,P15884,G0LNV0 | |||
|association_with_transcript=-132bp_to_NM_001243234,NM_001243235_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_61_at_TCF4_5end | |||
|id=chr18:52989222..52989233,- | |||
|ontology_enrichment_celltype=CL:0002144!3.18e-09!3;CL:0000047!5.61e-09!8;CL:0002139!1.25e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.13e-23;6!CL:0000404;2.13e-23;6!CL:0002319;2.28e-09;25!CL:0000047;4.18e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.88e-31,8;CL:0000540,2.30e-23,6;CL:0000031,2.30e-23,6;CL:0000404,2.30e-23,6;CL:0002319,2.36e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000031;2.13e-23;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!5.11e-33!22;UBERON:0001869!1.35e-29!32;UBERON:0000956!1.26e-28!25;UBERON:0000203!1.26e-28!25;UBERON:0001950!2.95e-28!20;UBERON:0001893!1.44e-27!34;UBERON:0002791!6.89e-26!33;UBERON:0002020!5.47e-25!34;UBERON:0003528!5.47e-25!34;UBERON:0002780!1.63e-24!41;UBERON:0001890!1.63e-24!41;UBERON:0006240!1.63e-24!41;UBERON:0000073!4.95e-24!94;UBERON:0001016!4.95e-24!94;UBERON:0003080!8.43e-24!42;UBERON:0001017!1.04e-23!82;UBERON:0005743!3.15e-22!86;UBERON:0001049!1.59e-19!57;UBERON:0005068!1.59e-19!57;UBERON:0006241!1.59e-19!57;UBERON:0007135!1.59e-19!57;UBERON:0002616!1.17e-18!59;UBERON:0000955!7.30e-18!69;UBERON:0006238!7.30e-18!69;UBERON:0003056!1.13e-14!61;UBERON:0002346!2.03e-12!90;UBERON:0003075!4.52e-12!86;UBERON:0007284!4.52e-12!86;UBERON:0001871!2.81e-11!7;UBERON:0000924!8.69e-11!173;UBERON:0006601!8.69e-11!173;UBERON:0007023!9.33e-11!115;UBERON:0004121!2.09e-10!169;UBERON:0000200!4.63e-10!6;UBERON:0002021!1.99e-09!5;UBERON:0001915!3.18e-09!3;UBERON:0001982!3.18e-09!3;UBERON:0000349!5.96e-09!5;UBERON:0001872!1.99e-08!5;UBERON:0002771!2.57e-08!3;UBERON:0000153!3.74e-08!129;UBERON:0007811!3.74e-08!129;UBERON:0000033!4.23e-08!123;UBERON:0001954!8.83e-07!2;UBERON:0003022!8.83e-07!2;UBERON:0002421!8.83e-07!2;UBERON:0002600!8.83e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;2.85e-13;5!UBERON:0001950;4.39e-12;20!UBERON:0002619;4.66e-11;22!UBERON:0000956;8.17e-10;25!UBERON:0000203;8.17e-10;25!UBERON:0000922;1.07e-09;49!UBERON:0002791;1.25e-07;32!UBERON:0001869;1.57e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.70e-14,81;UBERON:0002021,3.03e-13,5;UBERON:0001016,1.07e-12,89;UBERON:0001950,4.52e-12,20;UBERON:0002619,4.78e-11,22;UBERON:0000956,8.37e-10,25;UBERON:0000203,8.37e-10,25;UBERON:0002791,8.94e-08,32;UBERON:0001869,8.94e-08,32;UBERON:0003528,2.42e-07,34;UBERON:0002020,2.42e-07,34;UBERON:0001893,2.42e-07,34;UBERON:0011216,4.10e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.838998872419812,0,0,0,0,0,1.20848795132744,0.760272105718513,0.488124115096339,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,0,0.951270761172991,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,7.8083912314573,1.54657762555539,3.35032530668698,3.18969375826582,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,5.81538247097931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.953423842781029,0,0,0,0,0.77380195455795,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0.127894371303652,0.215649622793364,0,0.764467467344097,0,0,0.247871528518004,0,0,0,0,0,0,0.256916900385838,1.41696576325585,0.319267718114302,0.41023272848151,10.3349395450904,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,9.29857175330973,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,3.65263488203798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0.203974470572744,7.85431242612679,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p61@TCF4 | |||
}} |
Revision as of 19:25, 20 January 2014
Short description: | p61@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_61_at_TCF4_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -132bp_to_NM_001243234, NM_001243235_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | G0LNU9P15884G0LNV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.88e-31 | 8 |
neuron | 2.30e-23 | 6 |
neuroblast | 2.30e-23 | 6 |
electrically signaling cell | 2.30e-23 | 6 |
neural cell | 2.36e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.70e-14 | 81 |
occipital lobe | 3.03e-13 | 5 |
nervous system | 1.07e-12 | 89 |
neocortex | 4.52e-12 | 20 |
regional part of cerebral cortex | 4.78e-11 | 22 |
cerebral cortex | 8.37e-10 | 25 |
pallium | 8.37e-10 | 25 |
regional part of telencephalon | 8.94e-08 | 32 |
cerebral hemisphere | 8.94e-08 | 32 |
brain grey matter | 2.42e-07 | 34 |
gray matter | 2.42e-07 | 34 |
telencephalon | 2.42e-07 | 34 |
organ system subdivision | 4.10e-07 | 223 |