FFCP PHASE1:Hg19::chr18:31804736..31804754,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1440 | |||
|description=CAGE_peak_at_chr18:31804736..31804754,- | |||
|id=chr18:31804736..31804754,- | |||
|ontology_enrichment_celltype=CL:0000047!9.23e-10!8;CL:0002319!4.01e-09!25 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.11e-08;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.51e-12;3!UBERON:0006601;8.54e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.33e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.72e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!6.54e-74!82;UBERON:0005743!6.33e-72!86;UBERON:0000073!1.01e-70!94;UBERON:0001016!1.01e-70!94;UBERON:0001049!1.10e-69!57;UBERON:0005068!1.10e-69!57;UBERON:0006241!1.10e-69!57;UBERON:0007135!1.10e-69!57;UBERON:0002616!2.98e-61!59;UBERON:0000955!3.78e-60!69;UBERON:0006238!3.78e-60!69;UBERON:0002780!3.51e-57!41;UBERON:0001890!3.51e-57!41;UBERON:0006240!3.51e-57!41;UBERON:0003080!1.51e-55!42;UBERON:0002346!6.66e-55!90;UBERON:0003075!2.40e-53!86;UBERON:0007284!2.40e-53!86;UBERON:0002020!1.10e-45!34;UBERON:0003528!1.10e-45!34;UBERON:0001893!1.12e-45!34;UBERON:0002791!5.95e-44!33;UBERON:0003056!2.40e-43!61;UBERON:0001869!4.77e-43!32;UBERON:0000924!2.35e-40!173;UBERON:0006601!2.35e-40!173;UBERON:0004121!1.13e-38!169;UBERON:0007023!3.80e-38!115;UBERON:0000033!4.07e-35!123;UBERON:0000153!5.90e-34!129;UBERON:0007811!5.90e-34!129;UBERON:0000956!9.38e-33!25;UBERON:0000203!9.38e-33!25;UBERON:0001950!4.21e-29!20;UBERON:0002619!4.70e-29!22;UBERON:0003076!8.05e-15!15;UBERON:0003057!8.05e-15!15;UBERON:0002308!3.18e-14!9;UBERON:0000125!3.18e-14!9;UBERON:0002420!3.29e-14!9;UBERON:0007245!3.29e-14!9;UBERON:0010009!3.29e-14!9;UBERON:0010011!3.29e-14!9;UBERON:0000454!3.29e-14!9;UBERON:0000025!6.26e-14!194;UBERON:0004733!1.87e-13!12;UBERON:0002028!1.87e-13!12;UBERON:0007277!1.87e-13!12;UBERON:0001894!9.36e-13!7;UBERON:0006222!9.36e-13!7;UBERON:0004732!3.10e-12!13;UBERON:0009663!2.74e-11!7;UBERON:0000200!2.75e-11!6;UBERON:0001871!4.66e-11!7;UBERON:0000064!2.16e-10!219;UBERON:0002021!6.61e-10!5;UBERON:0002298!8.10e-10!8;UBERON:0004111!1.78e-09!241;UBERON:0002680!1.89e-09!9;UBERON:0001895!1.89e-09!9;UBERON:0010092!1.89e-09!9;UBERON:0003296!7.08e-09!4;UBERON:0010133!7.08e-09!4;UBERON:0000483!1.90e-08!309;UBERON:0000119!3.23e-08!312;UBERON:0000477!1.29e-07!286;UBERON:0000369!1.97e-07!4;UBERON:0002435!1.97e-07!4;UBERON:0000204!1.97e-07!4;UBERON:0010082!1.97e-07!4;UBERON:0001872!8.29e-07!5;UBERON:0000922!9.40e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.95e-38;22!UBERON:0001950;4.42e-37;20!UBERON:0000956;2.15e-33;25!UBERON:0000203;2.15e-33;25!UBERON:0001869;3.62e-29;32!UBERON:0002780;2.21e-27;41!UBERON:0001890;2.21e-27;41!UBERON:0001893;1.39e-26;34!UBERON:0002791;2.70e-26;32!UBERON:0000073;4.22e-23;53!UBERON:0002616;4.22e-23;53!UBERON:0003528;1.80e-22;34!UBERON:0002020;1.80e-22;34!UBERON:0000955;2.49e-20;68!UBERON:0001017;1.06e-18;75!UBERON:0002021;1.37e-18;5!UBERON:0001016;3.75e-17;83!UBERON:0003296;2.13e-16;4!UBERON:0010133;2.13e-16;4!UBERON:0001872;1.08e-12;5!UBERON:0000200;3.13e-10;6!UBERON:0001894;2.17e-09;7!UBERON:0001905;4.70e-09;2!UBERON:0000007;4.70e-09;2!UBERON:0002757;4.70e-09;2!UBERON:0010134;4.70e-09;2!UBERON:0005408;4.70e-09;2!UBERON:0001899;4.70e-09;2!UBERON:0011216;4.48e-08;132!UBERON:0007023;2.80e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.02e-45,89;UBERON:0001017,1.57e-45,81;UBERON:0000955,2.75e-42,68;UBERON:0006238,2.75e-42,68;UBERON:0000073,1.98e-41,53;UBERON:0002616,1.98e-41,53;UBERON:0001049,6.67e-39,56;UBERON:0005068,6.67e-39,56;UBERON:0006241,6.67e-39,56;UBERON:0007135,6.67e-39,56;UBERON:0002780,1.56e-38,41;UBERON:0001890,1.56e-38,41;UBERON:0003080,1.56e-38,41;UBERON:0006240,1.56e-38,41;UBERON:0002619,2.20e-38,22;UBERON:0001950,2.67e-37,20;UBERON:0000956,1.66e-33,25;UBERON:0000203,1.66e-33,25;UBERON:0001869,1.14e-32,32;UBERON:0002346,2.12e-32,86;UBERON:0001893,1.50e-30,34;UBERON:0003056,1.40e-29,61;UBERON:0003075,2.76e-29,82;UBERON:0007284,2.76e-29,82;UBERON:0002791,6.23e-29,32;UBERON:0003528,4.84e-27,34;UBERON:0002020,4.84e-27,34;UBERON:0004121,1.14e-24,171;UBERON:0000924,1.14e-24,171;UBERON:0006601,1.14e-24,171;UBERON:0011216,6.17e-22,223;UBERON:0010371,1.08e-21,104;UBERON:0002021,1.46e-18,5;UBERON:0010314,4.27e-17,132;UBERON:0003296,1.83e-16,4;UBERON:0010133,1.83e-16,4;UBERON:0007023,3.97e-16,114;UBERON:0001872,1.09e-12,5;UBERON:0000200,1.87e-10,6;UBERON:0000025,9.32e-10,192;UBERON:0001894,2.00e-09,7;UBERON:0006222,2.00e-09,7;UBERON:0000007,4.02e-09,2;UBERON:0001905,4.72e-09,2;UBERON:0002757,4.72e-09,2;UBERON:0010134,4.72e-09,2;UBERON:0005408,4.72e-09,2;UBERON:0001899,4.72e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0.273748850145768,0.125542639594803,0.229240217243854,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,1.30139853857622,0,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.398495976502139,0,1.0077309914171,0,1.23084805461069,0,0,0,0,0,0,0,2.90799823828566,1.57705766875147,3.99227596002388,0,0,0,0,0,0,3.44743373241465,0.583209226766509,0,0.885741385813839,0.844175070377856,3.05163472634166,2.98564001814306,1.47773809476774,2.4132393686937,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.741383633679017,0.522109747527277,0.404406797884062,0,0.234264445725339,0,0,0,0,0,2.14250933141343,0.063186579628488,0.60129367765797,0.207376382794494,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,1.35588444468319,0,0,1.89932387867636,0,0,0,0,0,0,10.9820798631657,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22583065500418,0.160753148465019,0.137539436597234,0.415440338029185,0,0,1.39723980313457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.92562821219883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.83039397352945,2.003054891304,0.573409195690071,0.443716206147409,1.1177352529449,0,0,0,0,0,0.936669811613763,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15104934173287,0.754773679776773,0,2.18419276384028,0,1.48802444071178,0,0,0,0,2.40171224485641,0,0,1.22035527683273,1.41696576325585,1.43670473151436,1.02558182120378,2.7727886584389,1.59061680667701,1.61475645631851,0,0,0,0,0,0,0.690359926060101,0,0,0.60511520611056,0,0,0,0,1.82351478469666,0,2.48024155801421,1.26831620387814,3.28184885410932,0,0,3.86916737591165,0,2.67850917939143,2.35398605553177,2.42786241694653,2.73194629621557,0,0,0,0.815636795721981,1.57854656550838,0,0,0,0.628462359664008,0,1.82631744101899,0,0,0.142953088353313,5.05643557544725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935757853848423,0,0,0,5.93678790425317,3.77407108916684,0.0771741581079447,0,2.82190377816914,0.980593287015622,2.12108892391463,0.392616934229891,0.891139200981258,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,1.63179576458195,1.74540276136151,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.620597975171371,0,0,0,0.0620747142958579,0,0.190941474834495,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p@chr18:31804736..31804754,- | |||
}} |
Revision as of 19:00, 20 January 2014
Short description: | p@chr18:31804736..31804754, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:31804736..31804754, - |
Coexpression cluster: | C1440_gastrointestinal_small_occipital_retinoblastoma_parietal_temporal_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.72e-09 | 10 |