FFCP PHASE1:Hg19::chr18:8747536..8747542,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:8747536..8747542,- | |||
|id=chr18:8747536..8747542,- | |||
|ontology_enrichment_celltype=CL:0000057!1.63e-27!75;CL:0000055!4.17e-24!180;CL:0002620!1.13e-18!23;CL:0002371!1.22e-12!591;CL:0000144!3.55e-12!625;CL:0000192!9.43e-12!42;CL:0000514!9.43e-12!42;CL:0000359!4.29e-11!32;CL:0000548!7.36e-10!679;CL:0000004!7.36e-10!679;CL:0000255!7.36e-10!679;CL:0000012!1.17e-09!682;CL:0000183!4.05e-09!59;CL:0000187!9.24e-09!54;CL:0000680!9.41e-09!57;CL:0000056!9.41e-09!57;CL:0000355!9.41e-09!57;CL:0002556!5.55e-08!6;CL:0000222!1.07e-07!119;CL:0002594!1.35e-07!4;CL:0002559!1.42e-07!4;CL:0000393!2.89e-07!60;CL:0000211!2.89e-07!60;CL:0000003!4.08e-07!722;CL:0000048!5.64e-07!430;CL:0000723!6.17e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.16e-30;23!CL:0002559;1.84e-26;5!CL:0002594;4.72e-21;4!CL:0000346;7.81e-17;3!CL:1000428;7.81e-17;3!CL:0002561;2.11e-11;2!CL:0000057;1.13e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.09e-30,23;CL:0002559,1.85e-26,5;CL:0002594,2.06e-21,4;CL:0000346,9.96e-17,3;CL:1000428,9.96e-17,3;CL:0000057,4.05e-16,76;CL:0002561,1.67e-11,2;CL:0000359,5.13e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.41e-09!5;DOID:450!4.41e-09!5;DOID:66!4.41e-09!5;DOID:423!4.41e-09!5;DOID:0080000!4.41e-09!5;DOID:11722!4.41e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;9.82e-18;5!DOID:450;9.82e-18;5!DOID:66;9.82e-18;5!DOID:423;9.82e-18;5!DOID:0080000;9.82e-18;5!DOID:11722;9.82e-18;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.17e-17,5;DOID:450,1.17e-17,5;DOID:66,1.17e-17,5;DOID:423,1.17e-17,5;DOID:0080000,1.17e-17,5;DOID:11722,1.17e-17,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!3.04e-14!45;UBERON:0002416!3.04e-14!45;UBERON:0002097!6.01e-14!40;UBERON:0000914!1.00e-13!83;UBERON:0002329!1.00e-13!83;UBERON:0003077!1.00e-13!83;UBERON:0003059!1.00e-13!83;UBERON:0007282!1.00e-13!83;UBERON:0009618!1.00e-13!83;UBERON:0007285!1.00e-13!83;UBERON:0001637!2.24e-13!42;UBERON:0003509!2.24e-13!42;UBERON:0004572!2.24e-13!42;UBERON:0003102!6.25e-12!95;UBERON:0000486!2.10e-11!82;UBERON:0004290!7.02e-11!70;UBERON:0005256!2.53e-10!143;UBERON:0000475!8.14e-10!365;UBERON:0004573!5.45e-09!33;UBERON:0004571!5.45e-09!33;UBERON:0002100!1.14e-08!216;UBERON:0002049!1.99e-08!79;UBERON:0007798!1.99e-08!79;UBERON:0003914!3.98e-08!118;UBERON:0001981!4.13e-08!60;UBERON:0007500!4.13e-08!60;UBERON:0004537!4.13e-08!60;UBERON:0006965!4.13e-08!60;UBERON:0001758!5.55e-08!6;UBERON:0003672!5.55e-08!6;UBERON:0001134!9.37e-08!61;UBERON:0002036!9.37e-08!61;UBERON:0003082!9.37e-08!61;UBERON:0004872!9.38e-08!84;UBERON:0000055!1.21e-07!69;UBERON:0001310!1.35e-07!4;UBERON:0002073!1.42e-07!4;UBERON:0005086!1.42e-07!4;UBERON:0002385!2.62e-07!63;UBERON:0001015!2.62e-07!63;UBERON:0000383!2.62e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;1.84e-26;5!UBERON:0002097;2.88e-26;41!UBERON:0001310;4.72e-21;4!UBERON:0002199;2.32e-19;46!UBERON:0002416;2.32e-19;46!UBERON:0003102;6.28e-18;50!UBERON:0000412;7.81e-17;3!UBERON:0001992;7.81e-17;3!UBERON:0005933;2.11e-11;2!UBERON:0005942;2.11e-11;2!UBERON:0005932;2.11e-11;2!UBERON:0010260;1.96e-09;9!UBERON:0001003;1.16e-08;15!UBERON:0007376;1.16e-08;15!UBERON:0001637;5.65e-07;42!UBERON:0003509;5.65e-07;42!UBERON:0004572;5.65e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.79e-33,41;UBERON:0002199,3.11e-33,46;UBERON:0002416,3.11e-33,46;UBERON:0002073,1.85e-26,5;UBERON:0005086,1.85e-26,5;UBERON:0001310,2.06e-21,4;UBERON:0003102,8.89e-17,99;UBERON:0000412,9.96e-17,3;UBERON:0001992,9.96e-17,3;UBERON:0005933,1.67e-11,2;UBERON:0005942,1.67e-11,2;UBERON:0005932,1.67e-11,2;UBERON:0001637,2.29e-10,42;UBERON:0003509,2.29e-10,42;UBERON:0004572,2.29e-10,42;UBERON:0010260,1.38e-09,9;UBERON:0001003,1.16e-08,15;UBERON:0007376,1.16e-08,15;UBERON:0007383,1.16e-08,15;UBERON:0002329,4.74e-08,71;UBERON:0003059,4.74e-08,71;UBERON:0007282,4.74e-08,71;UBERON:0004290,4.74e-08,71;UBERON:0009618,4.74e-08,71;UBERON:0003077,6.60e-08,72;UBERON:0007285,6.60e-08,72;UBERON:0000486,8.10e-08,83;UBERON:0007524,9.10e-08,73;UBERON:0007503,4.00e-07,78;UBERON:0007500,7.10e-07,59;UBERON:0001981,7.10e-07,59;UBERON:0004537,7.10e-07,59;UBERON:0006965,7.10e-07,59 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,2.53299878168311,0,0,0,0.697801167972428,0.436882744260345,0,0,0,1.34465029290355,0,0.730310090387373,0.975865597581014,0.123121058076788,1.02000345622126,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,1.69592382577203,0,0,0.417989933073621,0.258416759169329,0,0.33472061276467,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0.436094052142534,0,0.379891534993739,1.05927344650575,0.286836620748814,0,0.560677600142307,4.2699598291882,0.98667019366864,0.622422070799533,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0.741800787835671,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0.877955241761676,2.14541457059314,0.300476117813194,0,3.40840307808838,3.84403299873421,2.11931901159562,0.900273288253207,2.37020817248409,2.31876486041066,1.67505170698431,1.5189869901714,0.876933046450788,4.03894038790583,2.66944706062668,0.323292113637624,2.84007674013291,1.20902517873168,1.3564847384839,0.193260853163297,0,0,0,0,0,0,0,0,3.12899064659632,1.28648187638577,6.90674606762403,1.39310378409594,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0.718874566474748,0,1.42636905040718,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.468565659970853,0,0,0,0,2.02806085395873,0.347534457872331,0.195801157462741,0,0,0,0,0,0,0,0,0.61384789315225,0.280660094433074,0,0.511707249066704,0,1.48418066444991,0,0.177561725313127,0.164254312027618,0,0,0.120859449591622,0,0,0.34444334449382,0,0,0.902399225814824,0.15403067420883,0,0,0.633309773357254,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510450849978337,0,0,0.31481234683064,0,0.924100740528266,0,0,0.74129687641568,0.286249773483982,0,0.316379424718726,0,1.02359116524534,0,0,0.78494864019923,0.359744915166629,0,0.471249609382746,0.202182481573316,0,0,0.48763373908959,0,0,0,0,1.13008116620243,1.65409603063837,0,0.876901770507525,0,0,2.43492452355245,1.54911749049875,2.53526042279017,0.143411352204052,0,1.78335525740625,0,0,0,0.379473173765715,0,0,0,0,0,0.43050537267123,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.638002319463839,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.69647365264322,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0.464033759878494,0,0,1.03018711554838,1.6837474438296,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0.308801447160972,0,0.530067437837643,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:8747536..8747542,- | |||
}} |
Revision as of 18:29, 20 January 2014
Short description: | p@chr18:8747536..8747542, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:8747536..8747542, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.09e-30 | 23 |
hair follicle cell | 1.85e-26 | 5 |
smooth muscle cell of the umbilical artery | 2.06e-21 | 4 |
hair follicle dermal papilla cell | 9.96e-17 | 3 |
stem cell of epidermis | 9.96e-17 | 3 |
fibroblast | 4.05e-16 | 76 |
outer root sheath cell | 1.67e-11 | 2 |
vascular associated smooth muscle cell | 5.13e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.79e-33 | 41 |
integument | 3.11e-33 | 46 |
integumental system | 3.11e-33 | 46 |
hair follicle | 1.85e-26 | 5 |
hair follicle placode | 1.85e-26 | 5 |
umbilical artery | 2.06e-21 | 4 |
surface structure | 8.89e-17 | 99 |
dermal papilla | 9.96e-17 | 3 |
papillary layer of dermis | 9.96e-17 | 3 |
hair root sheath | 1.67e-11 | 2 |
hair outer root sheath | 1.67e-11 | 2 |
bulb of hair follicle | 1.67e-11 | 2 |
artery | 2.29e-10 | 42 |
arterial blood vessel | 2.29e-10 | 42 |
arterial system | 2.29e-10 | 42 |
umbilical blood vessel | 1.38e-09 | 9 |
skin epidermis | 1.16e-08 | 15 |
outer epithelium | 1.16e-08 | 15 |
enveloping layer of ectoderm | 1.16e-08 | 15 |
somite | 4.74e-08 | 71 |
presomitic mesoderm | 4.74e-08 | 71 |
presumptive segmental plate | 4.74e-08 | 71 |
dermomyotome | 4.74e-08 | 71 |
trunk paraxial mesoderm | 4.74e-08 | 71 |
paraxial mesoderm | 6.60e-08 | 72 |
presumptive paraxial mesoderm | 6.60e-08 | 72 |
multilaminar epithelium | 8.10e-08 | 83 |
dense mesenchyme tissue | 9.10e-08 | 73 |
epithelial vesicle | 4.00e-07 | 78 |
epithelial tube open at both ends | 7.10e-07 | 59 |
blood vessel | 7.10e-07 | 59 |
blood vasculature | 7.10e-07 | 59 |
vascular cord | 7.10e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.17e-17 | 5 |
myotonic disease | 1.17e-17 | 5 |
muscle tissue disease | 1.17e-17 | 5 |
myopathy | 1.17e-17 | 5 |
muscular disease | 1.17e-17 | 5 |
myotonic dystrophy | 1.17e-17 | 5 |