FFCP PHASE1:Hg19::chr17:79429043..79429051,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C346 | |||
|description=CAGE_peak_at_chr17:79429043..79429051,- | |||
|id=chr17:79429043..79429051,- | |||
|ontology_enrichment_celltype=CL:1000415!5.76e-21!2 | |||
|ontology_enrichment_celltype_v019=CL:1000415;8.10e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,7.14e-26,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.88e-50;1!UBERON:0004161;5.14e-19;11!UBERON:0009497;2.84e-16;13!UBERON:0003104;3.59e-07;31 | |||
|ontology_enrichment_disease=DOID:3493!1.53e-21!2;DOID:305!9.52e-12!106;DOID:0050687!8.37e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.90e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.56e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0002294!7.30e-36!7;UBERON:0001173!7.30e-36!7;UBERON:0004912!7.30e-36!7;UBERON:0002110!6.02e-31!3;UBERON:0006242!6.02e-31!3;UBERON:0009497!3.50e-14!25;UBERON:0000015!3.50e-14!25;UBERON:0002423!3.50e-14!25;UBERON:0006235!3.50e-14!25;UBERON:0004161!3.50e-14!25;UBERON:0000945!6.40e-12!8;UBERON:0010039!6.40e-12!8;UBERON:0004913!2.68e-11!1;UBERON:0003703!2.68e-11!1;UBERON:0001174!2.68e-11!1;UBERON:0004914!2.68e-11!1;UBERON:0006834!4.44e-11!1;UBERON:0002394!5.18e-11!4;UBERON:0003928!5.18e-11!4;UBERON:0000077!3.09e-09!130;UBERON:0002075!3.70e-09!18;UBERON:0003929!2.00e-08!54;UBERON:0001007!2.20e-07!155;UBERON:0001555!2.20e-07!155;UBERON:0007026!2.20e-07!155;UBERON:0001041!4.89e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;3.35e-66;3!UBERON:0002294;3.65e-29;7!UBERON:0001173;3.65e-29;7!UBERON:0002423;1.19e-18;25!UBERON:0002075;4.55e-12;18!UBERON:0002417;2.53e-07;58!UBERON:0000916;2.53e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,2.40e-66,3;UBERON:0006242,2.40e-66,3;UBERON:0002294,5.13e-23,9;UBERON:0001173,5.13e-23,9;UBERON:0004912,5.13e-23,9;UBERON:0009497,1.15e-18,25;UBERON:0000015,1.15e-18,25;UBERON:0002423,1.15e-18,25;UBERON:0006235,1.15e-18,25;UBERON:0004161,1.15e-18,25;UBERON:0002075,4.31e-12,18;UBERON:0003929,3.82e-09,54;UBERON:0005172,3.82e-09,54;UBERON:0005173,3.82e-09,54;UBERON:0002417,2.58e-08,60;UBERON:0000916,2.58e-08,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,1.56441106187842,0.0801588202515337,3.62870091056899,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687051635306701,3.04794812455674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0.473314686579554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p@chr17:79429043..79429051,- | |||
}} |
Revision as of 17:58, 20 January 2014
Short description: | p@chr17:79429043..79429051, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79429043..79429051, - |
Coexpression cluster: | C346_gall_ductus_seminal_temporal_duodenum_Hepatocyte_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 7.14e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 2.40e-66 | 3 |
gall bladder primordium | 2.40e-66 | 3 |
biliary system | 5.13e-23 | 9 |
biliary tree | 5.13e-23 | 9 |
biliary bud | 5.13e-23 | 9 |
epithelium of foregut-midgut junction | 1.15e-18 | 25 |
anatomical boundary | 1.15e-18 | 25 |
hepatobiliary system | 1.15e-18 | 25 |
foregut-midgut junction | 1.15e-18 | 25 |
septum transversum | 1.15e-18 | 25 |
viscus | 4.31e-12 | 18 |
gut epithelium | 3.82e-09 | 54 |
abdomen element | 3.82e-09 | 54 |
abdominal segment element | 3.82e-09 | 54 |
abdominal segment of trunk | 2.58e-08 | 60 |
abdomen | 2.58e-08 | 60 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.56e-26 | 2 |